Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g067010.3.1
CDS Infomation	Pattern formation EMB30-like protein (AHRD V3.3 *** A0A0B0NVB0_GOSAR)
Sequence	ATGGGGTGCCTCAATCAGCAGAGTGAAGTCAATACTCCATTTTCAGAACCCAATGATTGC ACTGTAAAGCCTTCCAAAGGTGCCTTAGCATGTATGGTAAATTCAGAAATTGGTGCTGTT TTGGCCGTTATGAGGAGAAATGTAAGGTGGGGGTTCCATTATGCTGCTGCTGATGATCAG CTAGAGCATCCTCTCATACATTCTTTCAAGGAATTACGGAAAAATGTCTTCTCATGGAAA CATCACTGGAACAGAGTTGATCCACTCCTATATCTTCAGCCTTTCTTGGATGTGATTCAA TCTGATGAAACTGGTGCACCAATAACCGGTGTTGCACTGTCTTCTGTTTACAAATTCTTA ACCCTTGAAATAATTGATTCATCTATCATGAATGTGGAGAAAGCTTTATATCAGATAGTT GAGACCGTGACAAGTTGCCGCTTTGAAGTGACTGATCCTGCCTCTGAGGAAGTGGTACTG ATGAAGATACTTCAGGTTCTTTTGGCTTGCATGAAAAGTAAGGCATCAGAAAATTTAAGT AATCATCACGTGTGCAACATTGTAAACACTTGCTTTCGGCTTGTTCATCAAGCTAGTGCC AAAAGTGAACTGCTGCAGAGAATAGCAAGACACACAATGCATGAATTGGTGAGACACATT TTCGCTCACCTGCCTAACATTATCAGCAAAGCGCATGAATTTGATCAGCAAAGCAGATTG TGTGCTGACTCAGAGGCAGGCGAAAAACAACATGACAATGGTTGTGTTAGTGCAGAATCC ACTGGTAAGTCAGCACCAGCTGCAGTTCCTTCCAATGCATCAGACAAGAGGGATGGAACA ACGGATGAAAAAACTCAAAAGGAGGAGATTGCTAGTAATAGAGAAAACCCTATGATGGAT CCATATGGGGTCCCCTGCATGGTGGAGATATTTCATTTCCTGTGTTCTCTTCTGAATGTG ATGGAGTCCATTGAAATTGGTTCTAGATCCAACCCTATAGCATATGATGAAGATGTTCCC TTGTTTGCACTGGGGTTAATTAATTCAGCCATAGAAGTAAGTGGTGCTTCATCTGGAAAT CATCCTGAGTTATTGGCTCTGATACAGAAAGACTTGTTCCACAATCTGATGCGTTTTGGC TTGTCTATGAGTCCTTTAATTCTTTCAACAGTTTGTAGCATTGTTCTAAATTTGTATCAT CATATGCGTAGTAAGTTAAAGCTACAGCTTGGAACTTTCTTCTCTGGTGTGTTATTGAGG ATTGCCCAAAGCAAGTATGGAACTTATTATCAACAACAAGAGGTTGCCATAGAAACTCTT GTTGACTTCTGCAGACAGCCCATGTTCATGCCTGAGATGTATGCAAATTTTGATTGTGAC ATATCTTGCAGCAATGTATTTGAAGACCTTGCAAACCTGTTATCCAAGAGTTCCTTTCCG GTCAACATCCCACTATCAGCTTTAAATACGCTCGCCTTAGATGGTCTAATTGCCATGATG GAGGGAATGGCCGAGAGAATTAGCCAGGATTCATTTGTTTCTGATCAAGCTTCAATAGAT CTGGGTGAATATAGATCGTTTTGGACAGAGATATGCAAGGACTACAGTGATCCTAATCAT TGGGTTCCATATCTTCGTAAGATGAAGGTCATAAAGAGGAAATTGTTGATTGGAGTTGAT CACTTTAACCGAGATCCAAAAAAGGGTATGGATTTTCTCCAAGGAGTGCATTTGTTACCT GAGAAACGTGACCCAAAAAGTGTAGCATGCTTTTTCAGGTATACGACTGGCTTAGATAAG AATCTTATTGGGGATTTCCTAGGAAGTCATGAAGACTTCTATATTGAAGTGCTTCACGAA TTTGCAGGAACATTTGATTTTCGGGGCATGAACTTAGACATAGCCTTGCGAATCTTTTTA GAAACCTTCAGATTGCCTGGAGAGTCTCAGAAAATACAGAGGGTGCTTGAGGCATTTGCT GAGCGATATTACGAGCAGTCGCAAAATATTCTGGCTGACAAAGATGCTGCACTATTGTTG TCATATTCAATTATTATGCTCAACACAGATCAACACAATGCCCAGGTAAAAAAGAAGATG ACGGAGGAAGATTTCATCCGGAACAACCGGAGGATAAACGGAGGAAATGACCTCCCTCGG GAATTTTTGTCCGAGCTTTACCGCTCCATTTGTGAGGATGAGATCCGAATTACCCCAGAT CGAGGTGCTGGTATTCCAATGATGGCACCAAGCCATTGGATTGGTCTAGTTCATAAATCA AGGCAAACTTCCCCATATATTATCTGTGATCCTGGTCCATATCTTGATTATGATATGTTT GCTATGTTGTCTGGTCCTGCAATTGCTTCCATATCTGTGGTTTTTGATAATGTGGAGCAA GAGGATGTTTGGGAAACATGTATCAGTGGATTCCTTGCCATTGCCAGAATTGCAGCTGCC TATAGCTTCGATGATGTGTTAAATGATTTAGTAGTATCTCTTTGCAAGTTCACAACCCTT TTGCTTCCATCTTATGTTGATGAATTTACTGTTGCATTTGCGGAAGATGGTAAAGCTAGA TTGGCCACATTAGCAGTCTTTACATTAGCGAACGAATATGGAGATCACATTCGCTCTGGT TGGAAGAACATCCTAGACTGCATTTTGTGTTTGCACAAATTGGGCCTTCTCCCCACACGT CTATTTAGTGATGCTGCTGATGACTTGGAGTCTACTGGTGATGCAGACCCTAGGAGACCT ACTGCACTTTTTCCATCACCATCTCGTTTTCCTTCATCGACTCCATCAAGAAAATCATCT GGCTTAATGGGGGTGTTTAGCCAACTATTATATCTTGACGAAGAACCTGCACCACAGCCA AATGAACAACAGCTTGCCGCACGTCAGCAGACTCTTCAGACAATTCAGAGCTGTCACGTT GATAGCATCTTTGCCGAGAGTAAATTTTTGCAAGCTGAGTCCCTGTTACAGCTTGTTCGG GCCGTTGTGTTGGCTGCAGGCAAGCCTCGCAAAAGAAACAATTCTCTGGAAGACGAAGAG ACTGCAGTATTTTGTCTAGAGTTGCTTATTGCTATCACAATAAATAACCGTGACAGAATA ATGCTTCTTTGGCAGGTCGTCTATGACCATATAGCAAGTGTTGTCCATTTAACAACAATG CCATCTACTTTGATAGAGAAGGCTGTGTTTGGTCTGCTTCGCATATGCCAAAGGTTACTT CCGTACAAGGAAAATCTCACAGATGAGCTTCTCAAGTCTCTGCAACTTATCTTAAAGCTT GATGCTCGGGTTGCTGATGCATTTCTTGAACAGATAACCCGGGAGGTTATGCACCTTGTC AAAGCAAATGCTATGCAGATACGATCTCATATAGGCTGGCGGACAATCATATCTCTGCTT TCTTTTACTGCTCGGCATCCCGAAGCATCTGAAACAGGTTTTGATACACTAGTGTTCATC ATGGCAGATGGGGCCCACCTCTTGCCTGCTAATTATGTTCTCTGTTTGAATGTGGCGGCG CAGTTTGCTGATTCTCATGTTGGGAATGTTGATCAATCTGTGAGATCTTTAGACCTGATG GCTGGATCACTTATCTCTCTTATTAGATGGTCTCACCAGGCGAAGGAAGCACTTGGGCAG GAGGCTGCTGTAAAAATGACCCAGGATATAACAGAAATGTGGCTCAGGCTGATACAGGGA CTGCGTAAATTTTGTAAAGACAGGAGAGAAGAGGTAAGGGATCATGCCATCTTGATGCTG CAGATGTGCTTGACTGGAGTTGATGGGATCCATATCCCTGAAGATTTGTGGTTGCAATGT TTTGATCAGGTGATATTTACATTACTAGATGAATTACTCAATCTTGCCCAGCCGAGCTTT GTGAAGGATTATAGGAGCACTGAAGGAGCAATAGTTTTGGCACTGAAGCTCATGTTCAAA ATGTTTTTACAGTCTTTGAATCATCTCTCCCAGTCGACATCCTTTTGCAAACTGTGGTTA GGGGTCTTGAGTCTAACAGAGAGATGCATGAAGGTGAAATTTAAAGGGAAATGGAGTGAA AAGATCCCTGAACTCATTTCCGAGCTCCTAAAGAACACTCTACTTGTCATGAAAACAAGT GGAATTCTGGGGCCAAGTAATCCTGTAGGAGGGGACAGCTTCTGGAAGTCAACATGGTTG CATGTCCACAAAATATGCCCATCCCTTCAGACAGAAATCTTTCCCACAAACGAAGCAGAA CAGTCGGAAAAACAGCATATCCAAGTAGGTTGTAGTCCTCTGGCAGAGGGAAATGTTATC GTCTCATCTGGTAATAGCACAGCTTGA

Peptide Sequence

PEP ID	Solyc02g067010.3.1
PEP Infomation	Pattern formation EMB30-like protein (AHRD V3.3 *** A0A0B0NVB0_GOSAR)
Sequence	MGCLNQQSEVNTPFSEPNDCTVKPSKGALACMVNSEIGAVLAVMRRNVRWGFHYAAADDQ LEHPLIHSFKELRKNVFSWKHHWNRVDPLLYLQPFLDVIQSDETGAPITGVALSSVYKFL TLEIIDSSIMNVEKALYQIVETVTSCRFEVTDPASEEVVLMKILQVLLACMKSKASENLS NHHVCNIVNTCFRLVHQASAKSELLQRIARHTMHELVRHIFAHLPNIISKAHEFDQQSRL CADSEAGEKQHDNGCVSAESTGKSAPAAVPSNASDKRDGTTDEKTQKEEIASNRENPMMD PYGVPCMVEIFHFLCSLLNVMESIEIGSRSNPIAYDEDVPLFALGLINSAIEVSGASSGN HPELLALIQKDLFHNLMRFGLSMSPLILSTVCSIVLNLYHHMRSKLKLQLGTFFSGVLLR IAQSKYGTYYQQQEVAIETLVDFCRQPMFMPEMYANFDCDISCSNVFEDLANLLSKSSFP VNIPLSALNTLALDGLIAMMEGMAERISQDSFVSDQASIDLGEYRSFWTEICKDYSDPNH WVPYLRKMKVIKRKLLIGVDHFNRDPKKGMDFLQGVHLLPEKRDPKSVACFFRYTTGLDK NLIGDFLGSHEDFYIEVLHEFAGTFDFRGMNLDIALRIFLETFRLPGESQKIQRVLEAFA ERYYEQSQNILADKDAALLLSYSIIMLNTDQHNAQVKKKMTEEDFIRNNRRINGGNDLPR EFLSELYRSICEDEIRITPDRGAGIPMMAPSHWIGLVHKSRQTSPYIICDPGPYLDYDMF AMLSGPAIASISVVFDNVEQEDVWETCISGFLAIARIAAAYSFDDVLNDLVVSLCKFTTL LLPSYVDEFTVAFAEDGKARLATLAVFTLANEYGDHIRSGWKNILDCILCLHKLGLLPTR LFSDAADDLESTGDADPRRPTALFPSPSRFPSSTPSRKSSGLMGVFSQLLYLDEEPAPQP NEQQLAARQQTLQTIQSCHVDSIFAESKFLQAESLLQLVRAVVLAAGKPRKRNNSLEDEE TAVFCLELLIAITINNRDRIMLLWQVVYDHIASVVHLTTMPSTLIEKAVFGLLRICQRLL PYKENLTDELLKSLQLILKLDARVADAFLEQITREVMHLVKANAMQIRSHIGWRTIISLL SFTARHPEASETGFDTLVFIMADGAHLLPANYVLCLNVAAQFADSHVGNVDQSVRSLDLM AGSLISLIRWSHQAKEALGQEAAVKMTQDITEMWLRLIQGLRKFCKDRREEVRDHAILML QMCLTGVDGIHIPEDLWLQCFDQVIFTLLDELLNLAQPSFVKDYRSTEGAIVLALKLMFK MFLQSLNHLSQSTSFCKLWLGVLSLTERCMKVKFKGKWSEKIPELISELLKNTLLVMKTS GILGPSNPVGGDSFWKSTWLHVHKICPSLQTEIFPTNEAEQSEKQHIQVGCSPLAEGNVI VSSGNSTA*

Transcript Sequence

Transcript ID	Solyc02g067010.3.1
Transcript Infomation	Pattern formation EMB30-like protein (AHRD V3.3 *** A0A0B0NVB0_GOSAR)
Sequence	AAAAAATATTGATTTCTAACCCGTTGTCTAAAGATCGACAAGGAGGACCCCTCCAAAATC AACTGCAAAAAAACCAAAAAAAAATATCAACTGCAATGACCCTATTACGAGCAGCTTTCA ATATTGTGTATAAGGAAGAAAGATGAGCATTTAAGAGAGAGAGAAGAGTGATTTAAACAT TTGAAAGCGGCAGAGACTTCGACATTTGGATGCCTAGAAGCGTACTTGGAGTAGAGTTGA ATTCTAATAAAATATTCAAGGTGGAGAAGAACTATCAATAATTCAGGAAATTGAAATGAT TTAGCAAGATGCTGCTTGATTCGTTCTGTAGCCTTTTGATTCTTTTACAATTGAAGTGAA CTAAATTAAAAGTTTAATCAAGATGGGGTGCCTCAATCAGCAGAGTGAAGTCAATACTCC ATTTTCAGAACCCAATGATTGCACTGTAAAGCCTTCCAAAGGTGCCTTAGCATGTATGGT AAATTCAGAAATTGGTGCTGTTTTGGCCGTTATGAGGAGAAATGTAAGGTGGGGGTTCCA TTATGCTGCTGCTGATGATCAGCTAGAGCATCCTCTCATACATTCTTTCAAGGAATTACG GAAAAATGTCTTCTCATGGAAACATCACTGGAACAGAGTTGATCCACTCCTATATCTTCA GCCTTTCTTGGATGTGATTCAATCTGATGAAACTGGTGCACCAATAACCGGTGTTGCACT GTCTTCTGTTTACAAATTCTTAACCCTTGAAATAATTGATTCATCTATCATGAATGTGGA GAAAGCTTTATATCAGATAGTTGAGACCGTGACAAGTTGCCGCTTTGAAGTGACTGATCC TGCCTCTGAGGAAGTGGTACTGATGAAGATACTTCAGGTTCTTTTGGCTTGCATGAAAAG TAAGGCATCAGAAAATTTAAGTAATCATCACGTGTGCAACATTGTAAACACTTGCTTTCG GCTTGTTCATCAAGCTAGTGCCAAAAGTGAACTGCTGCAGAGAATAGCAAGACACACAAT GCATGAATTGGTGAGACACATTTTCGCTCACCTGCCTAACATTATCAGCAAAGCGCATGA ATTTGATCAGCAAAGCAGATTGTGTGCTGACTCAGAGGCAGGCGAAAAACAACATGACAA TGGTTGTGTTAGTGCAGAATCCACTGGTAAGTCAGCACCAGCTGCAGTTCCTTCCAATGC ATCAGACAAGAGGGATGGAACAACGGATGAAAAAACTCAAAAGGAGGAGATTGCTAGTAA TAGAGAAAACCCTATGATGGATCCATATGGGGTCCCCTGCATGGTGGAGATATTTCATTT CCTGTGTTCTCTTCTGAATGTGATGGAGTCCATTGAAATTGGTTCTAGATCCAACCCTAT AGCATATGATGAAGATGTTCCCTTGTTTGCACTGGGGTTAATTAATTCAGCCATAGAAGT AAGTGGTGCTTCATCTGGAAATCATCCTGAGTTATTGGCTCTGATACAGAAAGACTTGTT CCACAATCTGATGCGTTTTGGCTTGTCTATGAGTCCTTTAATTCTTTCAACAGTTTGTAG CATTGTTCTAAATTTGTATCATCATATGCGTAGTAAGTTAAAGCTACAGCTTGGAACTTT CTTCTCTGGTGTGTTATTGAGGATTGCCCAAAGCAAGTATGGAACTTATTATCAACAACA AGAGGTTGCCATAGAAACTCTTGTTGACTTCTGCAGACAGCCCATGTTCATGCCTGAGAT GTATGCAAATTTTGATTGTGACATATCTTGCAGCAATGTATTTGAAGACCTTGCAAACCT GTTATCCAAGAGTTCCTTTCCGGTCAACATCCCACTATCAGCTTTAAATACGCTCGCCTT AGATGGTCTAATTGCCATGATGGAGGGAATGGCCGAGAGAATTAGCCAGGATTCATTTGT TTCTGATCAAGCTTCAATAGATCTGGGTGAATATAGATCGTTTTGGACAGAGATATGCAA GGACTACAGTGATCCTAATCATTGGGTTCCATATCTTCGTAAGATGAAGGTCATAAAGAG GAAATTGTTGATTGGAGTTGATCACTTTAACCGAGATCCAAAAAAGGGTATGGATTTTCT CCAAGGAGTGCATTTGTTACCTGAGAAACGTGACCCAAAAAGTGTAGCATGCTTTTTCAG GTATACGACTGGCTTAGATAAGAATCTTATTGGGGATTTCCTAGGAAGTCATGAAGACTT CTATATTGAAGTGCTTCACGAATTTGCAGGAACATTTGATTTTCGGGGCATGAACTTAGA CATAGCCTTGCGAATCTTTTTAGAAACCTTCAGATTGCCTGGAGAGTCTCAGAAAATACA GAGGGTGCTTGAGGCATTTGCTGAGCGATATTACGAGCAGTCGCAAAATATTCTGGCTGA CAAAGATGCTGCACTATTGTTGTCATATTCAATTATTATGCTCAACACAGATCAACACAA TGCCCAGGTAAAAAAGAAGATGACGGAGGAAGATTTCATCCGGAACAACCGGAGGATAAA CGGAGGAAATGACCTCCCTCGGGAATTTTTGTCCGAGCTTTACCGCTCCATTTGTGAGGA TGAGATCCGAATTACCCCAGATCGAGGTGCTGGTATTCCAATGATGGCACCAAGCCATTG GATTGGTCTAGTTCATAAATCAAGGCAAACTTCCCCATATATTATCTGTGATCCTGGTCC ATATCTTGATTATGATATGTTTGCTATGTTGTCTGGTCCTGCAATTGCTTCCATATCTGT GGTTTTTGATAATGTGGAGCAAGAGGATGTTTGGGAAACATGTATCAGTGGATTCCTTGC CATTGCCAGAATTGCAGCTGCCTATAGCTTCGATGATGTGTTAAATGATTTAGTAGTATC TCTTTGCAAGTTCACAACCCTTTTGCTTCCATCTTATGTTGATGAATTTACTGTTGCATT TGCGGAAGATGGTAAAGCTAGATTGGCCACATTAGCAGTCTTTACATTAGCGAACGAATA TGGAGATCACATTCGCTCTGGTTGGAAGAACATCCTAGACTGCATTTTGTGTTTGCACAA ATTGGGCCTTCTCCCCACACGTCTATTTAGTGATGCTGCTGATGACTTGGAGTCTACTGG TGATGCAGACCCTAGGAGACCTACTGCACTTTTTCCATCACCATCTCGTTTTCCTTCATC GACTCCATCAAGAAAATCATCTGGCTTAATGGGGGTGTTTAGCCAACTATTATATCTTGA CGAAGAACCTGCACCACAGCCAAATGAACAACAGCTTGCCGCACGTCAGCAGACTCTTCA GACAATTCAGAGCTGTCACGTTGATAGCATCTTTGCCGAGAGTAAATTTTTGCAAGCTGA GTCCCTGTTACAGCTTGTTCGGGCCGTTGTGTTGGCTGCAGGCAAGCCTCGCAAAAGAAA CAATTCTCTGGAAGACGAAGAGACTGCAGTATTTTGTCTAGAGTTGCTTATTGCTATCAC AATAAATAACCGTGACAGAATAATGCTTCTTTGGCAGGTCGTCTATGACCATATAGCAAG TGTTGTCCATTTAACAACAATGCCATCTACTTTGATAGAGAAGGCTGTGTTTGGTCTGCT TCGCATATGCCAAAGGTTACTTCCGTACAAGGAAAATCTCACAGATGAGCTTCTCAAGTC TCTGCAACTTATCTTAAAGCTTGATGCTCGGGTTGCTGATGCATTTCTTGAACAGATAAC CCGGGAGGTTATGCACCTTGTCAAAGCAAATGCTATGCAGATACGATCTCATATAGGCTG GCGGACAATCATATCTCTGCTTTCTTTTACTGCTCGGCATCCCGAAGCATCTGAAACAGG TTTTGATACACTAGTGTTCATCATGGCAGATGGGGCCCACCTCTTGCCTGCTAATTATGT TCTCTGTTTGAATGTGGCGGCGCAGTTTGCTGATTCTCATGTTGGGAATGTTGATCAATC TGTGAGATCTTTAGACCTGATGGCTGGATCACTTATCTCTCTTATTAGATGGTCTCACCA GGCGAAGGAAGCACTTGGGCAGGAGGCTGCTGTAAAAATGACCCAGGATATAACAGAAAT GTGGCTCAGGCTGATACAGGGACTGCGTAAATTTTGTAAAGACAGGAGAGAAGAGGTAAG GGATCATGCCATCTTGATGCTGCAGATGTGCTTGACTGGAGTTGATGGGATCCATATCCC TGAAGATTTGTGGTTGCAATGTTTTGATCAGGTGATATTTACATTACTAGATGAATTACT CAATCTTGCCCAGCCGAGCTTTGTGAAGGATTATAGGAGCACTGAAGGAGCAATAGTTTT GGCACTGAAGCTCATGTTCAAAATGTTTTTACAGTCTTTGAATCATCTCTCCCAGTCGAC ATCCTTTTGCAAACTGTGGTTAGGGGTCTTGAGTCTAACAGAGAGATGCATGAAGGTGAA ATTTAAAGGGAAATGGAGTGAAAAGATCCCTGAACTCATTTCCGAGCTCCTAAAGAACAC TCTACTTGTCATGAAAACAAGTGGAATTCTGGGGCCAAGTAATCCTGTAGGAGGGGACAG CTTCTGGAAGTCAACATGGTTGCATGTCCACAAAATATGCCCATCCCTTCAGACAGAAAT CTTTCCCACAAACGAAGCAGAACAGTCGGAAAAACAGCATATCCAAGTAGGTTGTAGTCC TCTGGCAGAGGGAAATGTTATCGTCTCATCTGGTAATAGCACAGCTTGAAGACAAAGTTC CCATCAGGCAGGTCTTTGTACAGTGAAAGTGATATATTCTGCATCAGCACCATTATTAGC GTAAGCAGATGATGAATTTTTCAGCTGAGAACCAGTTAAGCTTTATAGAAGCAACATTTG GGAGCAAATCTGAATTCAGCTTCTTCGCGGTATGGTTTAGTTTACAGATTGTCATATCTT TATTTCCACTCTTCAAAAAGGCATATATTTGCAGCCTTGATGGCTGTTGAAGAAGGGGTT ACTTTGATGAAATTTTGCACCGTCATCGCAGTTTCTGTACACACTCAAAGTCTGATAGTA GTTAACCATTTTGTCTGTACAATACTAGTATACTAGTACAAAATAGTGATTAATAGTATT AATATGAAATATTTCCATCAGGTTGATACACAGTTTTCTTGAAATAATATATTGCGATTA ACTAATGAACAAGTT