Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g065620.3.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 --* AT1G74990.1)
Sequence

ATGCCACTCATAAATTCGCCCCTAATTATAAGGTCTAAACCACGAGAAACCCGACCCGAA
AACATTTTCGTACTTTTATTCAAAACCGCGGCATACAAATCGACAAATTCAAAAATTTTT
CCATTCCCGGCAACTTGCAGAGCTTCCATGGAAGAGGAAGAGGCGAATCGACGGCATAAT
AAAGAGCGCCGGCCTTTACCTATCCGAGGCATGGAATCGGTGATTGCTACAGTCAGTGGA
TACCACGGTACCGAGAGATTTAATCTTATCAAGTTGATCGATAAGAGTGGTGCAAGTTAT
GTCGGTTCAATGAACCAGTCGATCACTCATTTGGTGTGTTGGAGATTTGAAGGGAAGAAA
TATGAGCTCGCAAAAAAGTTCAAAATGTCAATAATCAACCATAAGTGGGTTGAAAATTGT
ATTAAGGAAGGAAGACGTCTTCCAGAGGCTCCCTACACATTTCAGTGTGGACAAGACGTG
GGGCCGTTAATGTTGGATAGTACACTTCTTATAGAAACCATACAATTGAATCTCTCCAAA
AAACCAGCTATTCATATTGAATCTGAAGAGGATTTCAACTCTTGGACGGATTCAACTTTG
TTAAAAGAGAATTTATTTCCTGAGATGGGTAAATACAAGGATAAACGAAGGAGGAAATCA
AATGTCAATATTAAAAATAAGGATCACCCTTCCAGCAGCAAATATTGTTCCGATGAACAC
TCTTTACAGGGCTCACATAGGGTAGAGATTGAAGATTTGAATTTGGCCTCTTCTGCTTCC
CGTAAATCCAATAAGAGAAGTTCTGAATTTTGTGAAACTTCTCGCAGAAGTCGTAGATTG
ATGAAGAAGAACATTAGTGGGGATCTTCTGGAGATTACTTCGGGTTCAGGGAAACATAGT
CTCCAAATACAAGCTCGTCAGGAACTTGAAACTTCGGCACAATTTTACAACTTGGATGTT
GAAATGCCAGAATTCTCTGTGAACAACCGGCATGGATCTGGTTTTAGCTGCTATCAGTCG
GAGCCAATTAGAATAGACCTGGATGGTATTGAGGAAACTGAAGTTAACAGACCTCTTGAT
AGTGGTAATCAGAATTTACAAACAGAAAGTGCCTCCTCTGATCTTACTGGAAACCGACAA
GAGCCATGCCCAGCTATTGATGAGGTCCAAAATGAGACTGATAATACTTGCAAAGCGTCT
ACATCAACCACATTATCCTGTGTCATATGTTGGACAGACTTCAGTTCATCCAGGGGGGTG
CTTCCCTGTGGTCATCGTTTTTGTTTCTCATGCATCCAGACGTGGGCCAATCATATGGCA
TCAAGCAGAAAAGTATCAACATGCCCTTTGTGCAAGGCTAGTTTTGTTGCCATTAGAAAG
GTTGATGATGCAATTCCTGCTGATCAAAAGATATACACCCAAACTATTCCGGAGAAGAAT
CCAGAAATGGACATATATATACTTCCTGAGGGTGTAATAACACCAAGGTTGCCTTCAAAT
TCATCAAGAACTCCAGTCTGTTGTCAATGCTCTTGTCAAGAACCAGAGGACCTACTAGTC
AAATGCCATCTATGCGAGACTCTCTGTATCCATTCCTATTGTCTGGATCCTCCATTGTTT
CCATGGACATGTACACACTGCAAGGATCTACAAAGGCTTTACGGTCGTAACTGGTAA

Peptide Sequence

PEP ID

Solyc02g065620.3.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 --* AT1G74990.1)
Sequence

MPLINSPLIIRSKPRETRPENIFVLLFKTAAYKSTNSKIFPFPATCRASMEEEEANRRHN
KERRPLPIRGMESVIATVSGYHGTERFNLIKLIDKSGASYVGSMNQSITHLVCWRFEGKK
YELAKKFKMSIINHKWVENCIKEGRRLPEAPYTFQCGQDVGPLMLDSTLLIETIQLNLSK
KPAIHIESEEDFNSWTDSTLLKENLFPEMGKYKDKRRRKSNVNIKNKDHPSSSKYCSDEH
SLQGSHRVEIEDLNLASSASRKSNKRSSEFCETSRRSRRLMKKNISGDLLEITSGSGKHS
LQIQARQELETSAQFYNLDVEMPEFSVNNRHGSGFSCYQSEPIRIDLDGIEETEVNRPLD
SGNQNLQTESASSDLTGNRQEPCPAIDEVQNETDNTCKASTSTTLSCVICWTDFSSSRGV
LPCGHRFCFSCIQTWANHMASSRKVSTCPLCKASFVAIRKVDDAIPADQKIYTQTIPEKN
PEMDIYILPEGVITPRLPSNSSRTPVCCQCSCQEPEDLLVKCHLCETLCIHSYCLDPPLF
PWTCTHCKDLQRLYGRNW*

Transcript Sequence

Transcript ID

Solyc02g065620.3.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 --* AT1G74990.1)
Sequence

ACCTTCACGCATTAATAAAAATGACAAAATAAAGAGAGAAAGAAAAAGTTGAATAAAAAT
GAGAAACAAGGGAAAAAAGAAATGACAAAATAAAGATAGAGAAAAAAAAGAAAGAAAGAA
AAAGTTGAATAAAAATGAGAAACAAGACGGAAAAAGCTGAAAGCTTCCAAAAATTAATGT
TATTAACGAGGATTGAATAACAAATGGGTTGCTTTGCCAATTAGATTATTCACCATGGAT
GGGTTGCTTTGCCAATTATATACACAAAGTCTTTTTTCGAGACTAGTGAATGCCACTCAT
AAATTCGCCCCTAATTATAAGGTCTAAACCACGAGAAACCCGACCCGAAAACATTTTCGT
ACTTTTATTCAAAACCGCGGCATACAAATCGACAAATTCAAAAATTTTTCCATTCCCGGC
AACTTGCAGAGCTTCCATGGAAGAGGAAGAGGCGAATCGACGGCATAATAAAGAGCGCCG
GCCTTTACCTATCCGAGGCATGGAATCGGTGATTGCTACAGTCAGTGGATACCACGGTAC
CGAGAGATTTAATCTTATCAAGTTGATCGATAAGAGTGGTGCAAGTTATGTCGGTTCAAT
GAACCAGTCGATCACTCATTTGGTGTGTTGGAGATTTGAAGGGAAGAAATATGAGCTCGC
AAAAAAGTTCAAAATGTCAATAATCAACCATAAGTGGGTTGAAAATTGTATTAAGGAAGG
AAGACGTCTTCCAGAGGCTCCCTACACATTTCAGTGTGGACAAGACGTGGGGCCGTTAAT
GTTGGATAGTACACTTCTTATAGAAACCATACAATTGAATCTCTCCAAAAAACCAGCTAT
TCATATTGAATCTGAAGAGGATTTCAACTCTTGGACGGATTCAACTTTGTTAAAAGAGAA
TTTATTTCCTGAGATGGGTAAATACAAGGATAAACGAAGGAGGAAATCAAATGTCAATAT
TAAAAATAAGGATCACCCTTCCAGCAGCAAATATTGTTCCGATGAACACTCTTTACAGGG
CTCACATAGGGTAGAGATTGAAGATTTGAATTTGGCCTCTTCTGCTTCCCGTAAATCCAA
TAAGAGAAGTTCTGAATTTTGTGAAACTTCTCGCAGAAGTCGTAGATTGATGAAGAAGAA
CATTAGTGGGGATCTTCTGGAGATTACTTCGGGTTCAGGGAAACATAGTCTCCAAATACA
AGCTCGTCAGGAACTTGAAACTTCGGCACAATTTTACAACTTGGATGTTGAAATGCCAGA
ATTCTCTGTGAACAACCGGCATGGATCTGGTTTTAGCTGCTATCAGTCGGAGCCAATTAG
AATAGACCTGGATGGTATTGAGGAAACTGAAGTTAACAGACCTCTTGATAGTGGTAATCA
GAATTTACAAACAGAAAGTGCCTCCTCTGATCTTACTGGAAACCGACAAGAGCCATGCCC
AGCTATTGATGAGGTCCAAAATGAGACTGATAATACTTGCAAAGCGTCTACATCAACCAC
ATTATCCTGTGTCATATGTTGGACAGACTTCAGTTCATCCAGGGGGGTGCTTCCCTGTGG
TCATCGTTTTTGTTTCTCATGCATCCAGACGTGGGCCAATCATATGGCATCAAGCAGAAA
AGTATCAACATGCCCTTTGTGCAAGGCTAGTTTTGTTGCCATTAGAAAGGTTGATGATGC
AATTCCTGCTGATCAAAAGATATACACCCAAACTATTCCGGAGAAGAATCCAGAAATGGA
CATATATATACTTCCTGAGGGTGTAATAACACCAAGGTTGCCTTCAAATTCATCAAGAAC
TCCAGTCTGTTGTCAATGCTCTTGTCAAGAACCAGAGGACCTACTAGTCAAATGCCATCT
ATGCGAGACTCTCTGTATCCATTCCTATTGTCTGGATCCTCCATTGTTTCCATGGACATG
TACACACTGCAAGGATCTACAAAGGCTTTACGGTCGTAACTGGTAA