Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g065560.1.1
CDS Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9R8H7_RICCO)
Sequence	ATGAGCAATGGTTCAATATCTATAGCACTTGAATCATCTTCTTCCCTTTTCACCAAAATA CTCCATTACACTCGGTGCAAAAACCTTCCAAAAGGTCAATCTCTTCATTCTCATCTCATT AAAACTGGTTCTTCATCTTCTTGCATTTACATAGCCAACAGCATTGTCAACTTGTACGCC AAGTGCCACCGTTTATCGGACGCCCATCTCGCTTTCCAAGAAATACAGACCAAAGACGTT GTTTCATGGAACTCTCTCATCAATGGCTATTCTCAATTGGGTCGTCGAGATTCTTCTCTT TCTGCCCTCAATCTCTTCAAGCTAATGAGACAAGAAAACACCCTCCCAAATCCTCACACC TTTGCTGGCATTTTTACCTCTCTTTCGACTTTGGGGGATTCCTTTACTGGGAAGCAAGCA CATTGTCTTGCGTTTAAACTCGGTTATCTTTCCGATGTATTTGTGGGTAGTTCTTTGTTG AATGTGTATTGTAAGGCTGGTCATCATCTTGGTGATGCCCGCAACATGTTTGATGAAATG CCTGAGAGAAATTCTGTTTCTTGTACTACGATGATATCTGGGTATGCGTTGCAGAGGATG GTTAAGGAGGCTGTGGGAGTGTTTAGTGTGATGCTATTGAAGAGAGGGGAAGATGTGAAT GAGTTTGTCTTTACTAGTGTTCTTAGTGCTATTGCATTGCCTGAGTTTGTTTATGTTGGA AAGCAAATTCATTGTCTTTCTCTGAAGAATGGATTTTTATCGGCTGTTTCTGTTGCTAAT GCGACTGTGACTATGTATGCTAAGTGTGGGAGATTAGATGATGCGTGTAGGGCGTTCGAG CTCTCTTCTGAAAAGAATTCTATAACATGGTCTGCGTTAATTACTGGTTACGCACAGAAT GGGGATTGTGAGAAGGCGTTGAAGTTGTTCTCTGAGATGCATTACCGTGGGATGATTCCC AGTGAGTACACTCTGGTTGGGGTGCTTAATGCTTGTAGTGATTTTGATGCGCTTAGAGAA GGAAAACAGGTTCATGGATATCTAGTGAAGTTAGGATTTGAGCCTCAAATGTATATTCTG ACTGCATTAGTGGACATGTATGCTAAATGTGGTAACATAAGTGATGCAAGAAGAGGTTTT GAGTATTTGAAAGAACCCGATATAGTCTTATGGACTTCCATGATTGCGGGATATGTAAAG AATGGGGATAATGAAAGTGCTAAGGGTATGTATTGTAGAATGCTGATGGAGGGTGTTATG CCCAATGAGTTGACAATGGCGAGCGTGTTAAAAGCCTGTTCGAGTCTTGCTGCATTGGAA CAGGGAAAGCAGATTCATGCTCATATAGTCAAGCATGGTTTTAGTCTTGAAGTTCCAATT GGAAGTGCTCTGTCAACTATGTACGCAAAATCCGGAAGCCTCCATGACGGTAATCTAGTC TTTAGGCGAATGCCTGCTAGAGACTTAGTGTCATGGAACTCAATGATGTCAGGTCTTTCT CAGAACGGCTGCGGGACTGAAGCCCTTGAACTTTTTGAGGAAATGCTTCATGAGGGAACA AGACCAGATTATGTTACTTTTGTAAACATTCTTTCAGCTTGTAGTCACATGGGTTTGGTA AAGAGAGGGTGGAGTATTTTCAGAATGATGTCTGATGAGTTCGGGATAGAGCCAAGGCTA GAGCATTTCGCCTGTATGGTAGATATGCTCGGTCGTGCTGGAGAACTCTACAAAGCAAAA GAATTTATCGAGTCAGCAGCAAGTCATGTTGACCATGGTCTGTGTTTGTGGCGTATCTTG CTAAGTGCTTGCAGGAACTATAGAAACTATGAACTAGGCGCATACGCTGGAGAGAAGTTA ATGGAATTAGGTTCACAAGAGTCATCTGCTTATGTGCTACTCTCTAATATTTATTCATCT CTAGGAAGATTGGAGGACGTTGAACGCGTGAGAAGGTTGATGAATCTCCGCGGGGTAAGC AAGGAGCCTGGATGTAGCTGGATTGAGCTGAAGAGTCAGTTTCATGTATTTGTTGTTGGA GATCAGTTGCATCCACAAATCATACATATACGCGACGAGTTGTGGAAGTTAACTAAGCTC ATGAAAGATGAGGGATACAAACCAGATTTTGATCCTTGCTTAGAGTTAGAGGGAGTCATG GACTGA

Peptide Sequence

PEP ID	Solyc02g065560.1.1
PEP Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9R8H7_RICCO)
Sequence	MSNGSISIALESSSSLFTKILHYTRCKNLPKGQSLHSHLIKTGSSSSCIYIANSIVNLYA KCHRLSDAHLAFQEIQTKDVVSWNSLINGYSQLGRRDSSLSALNLFKLMRQENTLPNPHT FAGIFTSLSTLGDSFTGKQAHCLAFKLGYLSDVFVGSSLLNVYCKAGHHLGDARNMFDEM PERNSVSCTTMISGYALQRMVKEAVGVFSVMLLKRGEDVNEFVFTSVLSAIALPEFVYVG KQIHCLSLKNGFLSAVSVANATVTMYAKCGRLDDACRAFELSSEKNSITWSALITGYAQN GDCEKALKLFSEMHYRGMIPSEYTLVGVLNACSDFDALREGKQVHGYLVKLGFEPQMYIL TALVDMYAKCGNISDARRGFEYLKEPDIVLWTSMIAGYVKNGDNESAKGMYCRMLMEGVM PNELTMASVLKACSSLAALEQGKQIHAHIVKHGFSLEVPIGSALSTMYAKSGSLHDGNLV FRRMPARDLVSWNSMMSGLSQNGCGTEALELFEEMLHEGTRPDYVTFVNILSACSHMGLV KRGWSIFRMMSDEFGIEPRLEHFACMVDMLGRAGELYKAKEFIESAASHVDHGLCLWRIL LSACRNYRNYELGAYAGEKLMELGSQESSAYVLLSNIYSSLGRLEDVERVRRLMNLRGVS KEPGCSWIELKSQFHVFVVGDQLHPQIIHIRDELWKLTKLMKDEGYKPDFDPCLELEGVM D*

Transcript Sequence

Transcript ID	Solyc02g065560.1.1
Transcript Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9R8H7_RICCO)
Sequence	ATGAGCAATGGTTCAATATCTATAGCACTTGAATCATCTTCTTCCCTTTTCACCAAAATA CTCCATTACACTCGGTGCAAAAACCTTCCAAAAGGTCAATCTCTTCATTCTCATCTCATT AAAACTGGTTCTTCATCTTCTTGCATTTACATAGCCAACAGCATTGTCAACTTGTACGCC AAGTGCCACCGTTTATCGGACGCCCATCTCGCTTTCCAAGAAATACAGACCAAAGACGTT GTTTCATGGAACTCTCTCATCAATGGCTATTCTCAATTGGGTCGTCGAGATTCTTCTCTT TCTGCCCTCAATCTCTTCAAGCTAATGAGACAAGAAAACACCCTCCCAAATCCTCACACC TTTGCTGGCATTTTTACCTCTCTTTCGACTTTGGGGGATTCCTTTACTGGGAAGCAAGCA CATTGTCTTGCGTTTAAACTCGGTTATCTTTCCGATGTATTTGTGGGTAGTTCTTTGTTG AATGTGTATTGTAAGGCTGGTCATCATCTTGGTGATGCCCGCAACATGTTTGATGAAATG CCTGAGAGAAATTCTGTTTCTTGTACTACGATGATATCTGGGTATGCGTTGCAGAGGATG GTTAAGGAGGCTGTGGGAGTGTTTAGTGTGATGCTATTGAAGAGAGGGGAAGATGTGAAT GAGTTTGTCTTTACTAGTGTTCTTAGTGCTATTGCATTGCCTGAGTTTGTTTATGTTGGA AAGCAAATTCATTGTCTTTCTCTGAAGAATGGATTTTTATCGGCTGTTTCTGTTGCTAAT GCGACTGTGACTATGTATGCTAAGTGTGGGAGATTAGATGATGCGTGTAGGGCGTTCGAG CTCTCTTCTGAAAAGAATTCTATAACATGGTCTGCGTTAATTACTGGTTACGCACAGAAT GGGGATTGTGAGAAGGCGTTGAAGTTGTTCTCTGAGATGCATTACCGTGGGATGATTCCC AGTGAGTACACTCTGGTTGGGGTGCTTAATGCTTGTAGTGATTTTGATGCGCTTAGAGAA GGAAAACAGGTTCATGGATATCTAGTGAAGTTAGGATTTGAGCCTCAAATGTATATTCTG ACTGCATTAGTGGACATGTATGCTAAATGTGGTAACATAAGTGATGCAAGAAGAGGTTTT GAGTATTTGAAAGAACCCGATATAGTCTTATGGACTTCCATGATTGCGGGATATGTAAAG AATGGGGATAATGAAAGTGCTAAGGGTATGTATTGTAGAATGCTGATGGAGGGTGTTATG CCCAATGAGTTGACAATGGCGAGCGTGTTAAAAGCCTGTTCGAGTCTTGCTGCATTGGAA CAGGGAAAGCAGATTCATGCTCATATAGTCAAGCATGGTTTTAGTCTTGAAGTTCCAATT GGAAGTGCTCTGTCAACTATGTACGCAAAATCCGGAAGCCTCCATGACGGTAATCTAGTC TTTAGGCGAATGCCTGCTAGAGACTTAGTGTCATGGAACTCAATGATGTCAGGTCTTTCT CAGAACGGCTGCGGGACTGAAGCCCTTGAACTTTTTGAGGAAATGCTTCATGAGGGAACA AGACCAGATTATGTTACTTTTGTAAACATTCTTTCAGCTTGTAGTCACATGGGTTTGGTA AAGAGAGGGTGGAGTATTTTCAGAATGATGTCTGATGAGTTCGGGATAGAGCCAAGGCTA GAGCATTTCGCCTGTATGGTAGATATGCTCGGTCGTGCTGGAGAACTCTACAAAGCAAAA GAATTTATCGAGTCAGCAGCAAGTCATGTTGACCATGGTCTGTGTTTGTGGCGTATCTTG CTAAGTGCTTGCAGGAACTATAGAAACTATGAACTAGGCGCATACGCTGGAGAGAAGTTA ATGGAATTAGGTTCACAAGAGTCATCTGCTTATGTGCTACTCTCTAATATTTATTCATCT CTAGGAAGATTGGAGGACGTTGAACGCGTGAGAAGGTTGATGAATCTCCGCGGGGTAAGC AAGGAGCCTGGATGTAGCTGGATTGAGCTGAAGAGTCAGTTTCATGTATTTGTTGTTGGA GATCAGTTGCATCCACAAATCATACATATACGCGACGAGTTGTGGAAGTTAACTAAGCTC ATGAAAGATGAGGGATACAAACCAGATTTTGATCCTTGCTTAGAGTTAGAGGGAGTCATG GACTGA