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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g065100.1.1
CDS Infomation

Patatin (AHRD V3.3 *** K4B6U5_SOLLC)
Sequence

ATGGCTAGGATTTTTGTAGTTGCACTACTAATCACTTTTCTAGTACTGTTGCAACAATAT
CCTATAGCTTGTGTAGCTACTAAACGAAAGACGGTAACGATTTTAAGCATTGATGGAGGT
GGTATTAGAGGCATTATTCCCAGCACTATTCTTGCATTCCTTGAATCCAAACTTCAGGAA
CTTGATGGAGCCAATGCAAGAATTGCAGACTATTTTGATGTAATAGCTGGTACAAGTACA
GGTGGACTTGTAACCACAATGCTCACAGCTCCAAACAAGGATAATCGCCCTTTATATGCT
GCAAAAGATATTAACAACTTCTACATGGAACACGCCCCTAAAATCTTTCCTCAGAGAAGC
CGCAACAACTTCATGAAGAAGATGTTTAATTTATTTGGTGGACCAAAGTATGATGGCGAA
TACCTGAGATTGTTGGTTAGGTCGGAACTAGGCAATCTTACTATGAAGCAAACATTGACG
GATACACTTATTCCAACTTTTGATATCAAACGCCTTCAACCTATCATTTTCACAACTACT
GATGCCAGAGCAATTGTGTCTAAGAATGCACGCCTATCAGACGTTTCTCTTGGTACTTCA
GCAGCACCCACTTATTTCCCTGTACATTATTTTGAGACTAAGGATGCTCAAGGAAAAATA
CGTACATTTGATCTTGTTGATGGAGCTGTAGCTGCAAATAATCCTACTCTACTAGCAATT
ACTCACATTTCAAGAGAAATGATGACGAGAAGACTGAAATATGAGGATGCGAAAACTGTG
GACTGCAAGAAAATGTTGGTTCTGTCACTGGGCACTGGCACAGGCAAGAATAAAGAGAAG
TACAATGCTGCCACAGCTTCAAAATGGGGTCTTCTTAGTTGGATGTACAATCATGGTGCA
ATTCCATTACTAGACATTTTTACTGATGCAATTACTGATATTGTGGATATACATGTTTCA
ACTATGTTTCAGTCCCTTCACAACCACAAGAATTACCTCAGAATTCAGAATGATAGTATG
ATCGGGGAGGCGGCATCTATGGATATTTCAACCATAGAAAACATGCAGACATCAGTGCAG
ACTGGTAAAGATCTACTGAAGAAGCCTGTGTCAAGGGTCAACTTGGAGACGGGCCGCGTT
GAAGCAGTTCGAGGGGAAGGCACCAATGAAGAAGCTCTTACTCGCTTTGCTAAGTTGCTT
TCAGAGGAAAGAAAGTTTCGACGATTAGAGACATGA

Peptide Sequence

PEP ID

Solyc02g065100.1.1
PEP Infomation

Patatin (AHRD V3.3 *** K4B6U5_SOLLC)
Sequence

MARIFVVALLITFLVLLQQYPIACVATKRKTVTILSIDGGGIRGIIPSTILAFLESKLQE
LDGANARIADYFDVIAGTSTGGLVTTMLTAPNKDNRPLYAAKDINNFYMEHAPKIFPQRS
RNNFMKKMFNLFGGPKYDGEYLRLLVRSELGNLTMKQTLTDTLIPTFDIKRLQPIIFTTT
DARAIVSKNARLSDVSLGTSAAPTYFPVHYFETKDAQGKIRTFDLVDGAVAANNPTLLAI
THISREMMTRRLKYEDAKTVDCKKMLVLSLGTGTGKNKEKYNAATASKWGLLSWMYNHGA
IPLLDIFTDAITDIVDIHVSTMFQSLHNHKNYLRIQNDSMIGEAASMDISTIENMQTSVQ
TGKDLLKKPVSRVNLETGRVEAVRGEGTNEEALTRFAKLLSEERKFRRLET*

Transcript Sequence

Transcript ID

Solyc02g065100.1.1
Transcript Infomation

Patatin (AHRD V3.3 *** K4B6U5_SOLLC)
Sequence

ATGGCTAGGATTTTTGTAGTTGCACTACTAATCACTTTTCTAGTACTGTTGCAACAATAT
CCTATAGCTTGTGTAGCTACTAAACGAAAGACGGTAACGATTTTAAGCATTGATGGAGGT
GGTATTAGAGGCATTATTCCCAGCACTATTCTTGCATTCCTTGAATCCAAACTTCAGGAA
CTTGATGGAGCCAATGCAAGAATTGCAGACTATTTTGATGTAATAGCTGGTACAAGTACA
GGTGGACTTGTAACCACAATGCTCACAGCTCCAAACAAGGATAATCGCCCTTTATATGCT
GCAAAAGATATTAACAACTTCTACATGGAACACGCCCCTAAAATCTTTCCTCAGAGAAGC
CGCAACAACTTCATGAAGAAGATGTTTAATTTATTTGGTGGACCAAAGTATGATGGCGAA
TACCTGAGATTGTTGGTTAGGTCGGAACTAGGCAATCTTACTATGAAGCAAACATTGACG
GATACACTTATTCCAACTTTTGATATCAAACGCCTTCAACCTATCATTTTCACAACTACT
GATGCCAGAGCAATTGTGTCTAAGAATGCACGCCTATCAGACGTTTCTCTTGGTACTTCA
GCAGCACCCACTTATTTCCCTGTACATTATTTTGAGACTAAGGATGCTCAAGGAAAAATA
CGTACATTTGATCTTGTTGATGGAGCTGTAGCTGCAAATAATCCTACTCTACTAGCAATT
ACTCACATTTCAAGAGAAATGATGACGAGAAGACTGAAATATGAGGATGCGAAAACTGTG
GACTGCAAGAAAATGTTGGTTCTGTCACTGGGCACTGGCACAGGCAAGAATAAAGAGAAG
TACAATGCTGCCACAGCTTCAAAATGGGGTCTTCTTAGTTGGATGTACAATCATGGTGCA
ATTCCATTACTAGACATTTTTACTGATGCAATTACTGATATTGTGGATATACATGTTTCA
ACTATGTTTCAGTCCCTTCACAACCACAAGAATTACCTCAGAATTCAGAATGATAGTATG
ATCGGGGAGGCGGCATCTATGGATATTTCAACCATAGAAAACATGCAGACATCAGTGCAG
ACTGGTAAAGATCTACTGAAGAAGCCTGTGTCAAGGGTCAACTTGGAGACGGGCCGCGTT
GAAGCAGTTCGAGGGGAAGGCACCAATGAAGAAGCTCTTACTCGCTTTGCTAAGTTGCTT
TCAGAGGAAAGAAAGTTTCGACGATTAGAGACATGA