Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g065070.3.1
CDS Infomation

CDPK-related kinase (AHRD V3.3 *** AT3G50530.1)
Sequence

ATGGGTGGTTGCACATCGAAACCTTCCCCTGAACCCAATTATTCCAACAATGATCTCTAT
GCTCCCGACGGAACTGCTATTCCGGCTAAAGATAATAACAGCGAAGATAGTAAGAGCAAG
GAGGGAGCTGAAGTGGGTAAAAAGTCGCCGTTTTTTCCATTTTACAGTCCAAGTCCGGCG
CATTATTTTTTTTCAAAGAAGTCACCGGCGAGATCTCCGTCGAATTCTACGCCCCGGAGG
TTTTTTAAGCGGCCGTTTCCTCCGCCGTCTCCGGCGAAACACATACGAGCTGTGCTAGCA
CGGCGGCATGGTTCTGTGAAACCCAATGCAATTCCGGAAGGAAATGAATTGGAGGGGGGT
GGGGGTCTTGATAAGAGTTTTGGGTTTTCGAAGAATTTTGAAAACAAGTATGAACTTGGA
GAAGAAGTTGGGAGAGGGCATTTTGGGTATACTTGTAAAGCTAAGTTCAAGAAGGGTGAA
CTTAAGGGACAAGAAGTTGCAGTAAAAGTCATACCCAAAGCAAAGATGACCACGACGATA
GCCATTGAGGACGTGAGAAGAGAGGTGAAGATATTAAGAGCTTTAACGGGACACGAAAAT
CTAGTAAAATTTTATGATGCATACGAAGATCACGAAAATGTCTACATAGTGATGGAGCTA
TGTGAAGGAGGCGAGCTTTTGGATAGGATACTTTTAAGAGGTGGAAAATACACTGAAGAT
GATGCAAGGGCTGTGTTGACACAAATATTGAAAGTTGTTGCATTTTGTCATCTTCAAGGT
GTGGTACACCGGGATCTTAAACCAGAGAATTTCTTGTTCATGTCCAAGGAAGAAAATGCA
CAACTTAAAGCCATCGACTTTGGGTTGTCTGATTTTGTGAAACCAGATGAAAGGCTTAAT
GATATTGTTGGTAGTGCATATTATGTAGCGCCAGAAGTTCTACACAGATCTTATAGTACA
GAGGCTGATGTGTGGAGTATAGGTGTTATTTCATATATCTTGCTGTGTGGTAGCCGTCCC
TTTTGGGCTCGAACTGAGTCTGGGATATTTAGGGCTGTTCTCAAAGCTGATCCAGGTTTT
GAAGAACAGCCTTGGCCTACATTATCTTCTGAAGCAAAAGACTTTGTGAAACGTCTCTTG
AATAAGGATCCACGGAAAAGAATGACAGCAGCTCAGGCCTTGGGTCATCCTTGGATAAAG
AATAGTCATGACGTAGAAGTGCCTTTGGATATACTGATATTCAAACTCATGAAGACTTAC
ATGCGTTCATCTGCTCTTTGGAAAGCTGCTCTAAGGGCGTTGTCAAAGACATTGACCGTA
GATGAGTTGGTCCATTTGAAGCAGCAGTTTGCACTGCTGGAGCCAAACAAAAATGGCACA
ATAAACTTGGATAACATTAAAGCGGCCCTGATGAAATATGCAACAGATGCCATGAAGGAG
GCACGCATTCATGATTTCGTTGCTTCACTTAATGCACTGCAATACCGAAGGATGGATTTT
GAGGAATTCTGTGCTGCTGCATTAAGTGTATATCAGCTTGAGGCTCTTGACCAATGGGAA
CAACATGCGCGCTGTGCATATGAAATTTTTGAGAAAGATGGCAACAGAGCAATTGTCATA
GAAGAATTAGCTTCGGAACTTGGTCTTGGTCCATCTGTTCCTGTTCATGCTGTTCTTCTT
GACTGGATCAGACACACTGATGGAAAGCTTAGTTTTCTTGGTTTTGCAAAGTTGTTGCAT
GGTGTGTCAAGCCGCTCAATCACAAAAGTTCAATGA

Peptide Sequence

PEP ID

Solyc02g065070.3.1
PEP Infomation

CDPK-related kinase (AHRD V3.3 *** AT3G50530.1)
Sequence

MGGCTSKPSPEPNYSNNDLYAPDGTAIPAKDNNSEDSKSKEGAEVGKKSPFFPFYSPSPA
HYFFSKKSPARSPSNSTPRRFFKRPFPPPSPAKHIRAVLARRHGSVKPNAIPEGNELEGG
GGLDKSFGFSKNFENKYELGEEVGRGHFGYTCKAKFKKGELKGQEVAVKVIPKAKMTTTI
AIEDVRREVKILRALTGHENLVKFYDAYEDHENVYIVMELCEGGELLDRILLRGGKYTED
DARAVLTQILKVVAFCHLQGVVHRDLKPENFLFMSKEENAQLKAIDFGLSDFVKPDERLN
DIVGSAYYVAPEVLHRSYSTEADVWSIGVISYILLCGSRPFWARTESGIFRAVLKADPGF
EEQPWPTLSSEAKDFVKRLLNKDPRKRMTAAQALGHPWIKNSHDVEVPLDILIFKLMKTY
MRSSALWKAALRALSKTLTVDELVHLKQQFALLEPNKNGTINLDNIKAALMKYATDAMKE
ARIHDFVASLNALQYRRMDFEEFCAAALSVYQLEALDQWEQHARCAYEIFEKDGNRAIVI
EELASELGLGPSVPVHAVLLDWIRHTDGKLSFLGFAKLLHGVSSRSITKVQ*

Transcript Sequence

Transcript ID

Solyc02g065070.3.1
Transcript Infomation

CDPK-related kinase (AHRD V3.3 *** AT3G50530.1)
Sequence

TCATGCAAAGTTTTCATCTTTGAGCTAACTAAATTCTTCAACTAATTTAATGGGTGGTTG
CACATCGAAACCTTCCCCTGAACCCAATTATTCCAACAATGATCTCTATGCTCCCGACGG
AACTGCTATTCCGGCTAAAGATAATAACAGCGAAGATAGTAAGAGCAAGGAGGGAGCTGA
AGTGGGTAAAAAGTCGCCGTTTTTTCCATTTTACAGTCCAAGTCCGGCGCATTATTTTTT
TTCAAAGAAGTCACCGGCGAGATCTCCGTCGAATTCTACGCCCCGGAGGTTTTTTAAGCG
GCCGTTTCCTCCGCCGTCTCCGGCGAAACACATACGAGCTGTGCTAGCACGGCGGCATGG
TTCTGTGAAACCCAATGCAATTCCGGAAGGAAATGAATTGGAGGGGGGTGGGGGTCTTGA
TAAGAGTTTTGGGTTTTCGAAGAATTTTGAAAACAAGTATGAACTTGGAGAAGAAGTTGG
GAGAGGGCATTTTGGGTATACTTGTAAAGCTAAGTTCAAGAAGGGTGAACTTAAGGGACA
AGAAGTTGCAGTAAAAGTCATACCCAAAGCAAAGATGACCACGACGATAGCCATTGAGGA
CGTGAGAAGAGAGGTGAAGATATTAAGAGCTTTAACGGGACACGAAAATCTAGTAAAATT
TTATGATGCATACGAAGATCACGAAAATGTCTACATAGTGATGGAGCTATGTGAAGGAGG
CGAGCTTTTGGATAGGATACTTTTAAGAGGTGGAAAATACACTGAAGATGATGCAAGGGC
TGTGTTGACACAAATATTGAAAGTTGTTGCATTTTGTCATCTTCAAGGTGTGGTACACCG
GGATCTTAAACCAGAGAATTTCTTGTTCATGTCCAAGGAAGAAAATGCACAACTTAAAGC
CATCGACTTTGGGTTGTCTGATTTTGTGAAACCAGATGAAAGGCTTAATGATATTGTTGG
TAGTGCATATTATGTAGCGCCAGAAGTTCTACACAGATCTTATAGTACAGAGGCTGATGT
GTGGAGTATAGGTGTTATTTCATATATCTTGCTGTGTGGTAGCCGTCCCTTTTGGGCTCG
AACTGAGTCTGGGATATTTAGGGCTGTTCTCAAAGCTGATCCAGGTTTTGAAGAACAGCC
TTGGCCTACATTATCTTCTGAAGCAAAAGACTTTGTGAAACGTCTCTTGAATAAGGATCC
ACGGAAAAGAATGACAGCAGCTCAGGCCTTGGGTCATCCTTGGATAAAGAATAGTCATGA
CGTAGAAGTGCCTTTGGATATACTGATATTCAAACTCATGAAGACTTACATGCGTTCATC
TGCTCTTTGGAAAGCTGCTCTAAGGGCGTTGTCAAAGACATTGACCGTAGATGAGTTGGT
CCATTTGAAGCAGCAGTTTGCACTGCTGGAGCCAAACAAAAATGGCACAATAAACTTGGA
TAACATTAAAGCGGCCCTGATGAAATATGCAACAGATGCCATGAAGGAGGCACGCATTCA
TGATTTCGTTGCTTCACTTAATGCACTGCAATACCGAAGGATGGATTTTGAGGAATTCTG
TGCTGCTGCATTAAGTGTATATCAGCTTGAGGCTCTTGACCAATGGGAACAACATGCGCG
CTGTGCATATGAAATTTTTGAGAAAGATGGCAACAGAGCAATTGTCATAGAAGAATTAGC
TTCGGAACTTGGTCTTGGTCCATCTGTTCCTGTTCATGCTGTTCTTCTTGACTGGATCAG
ACACACTGATGGAAAGCTTAGTTTTCTTGGTTTTGCAAAGTTGTTGCATGGTGTGTCAAG
CCGCTCAATCACAAAAGTTCAATGATTCCAGCTTCATATACCTAGCATGTACGTTAGTGA
TATGTGATGCAGGGACCAGTATGCGGTTCCTTTGAGATGAATTCCTAGCAGAAGATGTTT
TTATCTTGGCATTGGCACCATGTCATATAGTTTTTGTTTTCCTTGTGTAAATGAATAGTT
AGTTTCTGTTTGGTTACAGATGATAGTATATCTCTCAGCTGGTTCCTAGACACTTATACA
AGATGTTCTAACCTATTAGACAGCCCTCCCTGACCACTGCCATTGCATTGTATGATTGTA
TCATCGTGTTTGTAAACATACGCCTTTATAGTTGAAAAAAATTCATCACTTTTTTGCTTC