Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g062810.3.1
CDS Infomation

Signal recognition particle subunit SRP68 (AHRD V3.3 *** K4B6G9_SOLLC)
Sequence

ATGGGGAAGCAGAAGGAAAGTACTGCTATGGAAATCGAGGATCAGAGTTCTATTCCTTCT
GACCAGATCAGTAACCTTAAGTTCTCTGTCAATGTGTTACAGCTTTTAAAATCTGCTCAA
ATGCAGCATGGACTGAGATTCGGTGATTATGCTCGTTACAGGAGGTATTGTACGGCTCGA
TTAAGGAGATTGTATAAATCACTCAAGTTTACTCACGGACGTTTGAAGTACACTAAGCGT
TCAATTTCAGTAACTACGGTCACCGAAGTAAGGTTTCTTCACTTGGTTCTCTATACATCT
GAAAGAGCTTGGAGTCATGCTATGGAAAAGAAAACATTGCCTGATGGACCAAATGCACGC
CAAAGAAGTTATCTGATTGGTCGGTTGAGAAAGGCGGTTAAATGGGCTAGTCTTTTCCAG
GAATTATGTTCCATCAAGGGAGATTCAAGAACATCTTTAGAAGCTGAGGCTTATGCTGCA
TACATGAAAGGGAGTTTATTGTTTGAAAAAGATCAAAATTGGGACGTTGCTCTAAAGTGT
TTCAAAAGTGCCAGGGCTGTGTATGAGGAACTTGGAAAATATGGGGATCTAGAGAACCAA
GTATTGTGCCGTGAGCGAGTTGAGGAACTAGAACCTAGTATCAGATATTGCTTACACAAG
ATTGGTGAGTCTAACTTACAAACTTCTGAACTCGTTTCCATCGGTGAAATTGAAGGGCCT
GCACTGGACCTTTTCAAAGCAAAGTTGGAGGCTGCTATGGCAGAGGCAAGATCTCAGCAG
GCTGCATCTATGACAGAATTTCATTGGCTTGGAAATAGATTTCCAATTTCAAATGCAAAG
ACACGTGTGTCCATCCTGAAAGCCCAGGAACTGGAGAAAGATATCCATGGTTCAGCTGCT
GATTCTCTTCCAGCAGAGAAGAAACTTGTGTTATATGACAAAATATTTGCCGCATATCAC
GAAGCCAGGAGCTGCATCCGGAATGACCTGGTTACGGCTGCTAATTCAGAAAATGTGAAG
GATGAGTTAAGTGGACTGGATAAAGCCGTTGGTGCAATTTTAGGTCAGCGAACCATTGAG
AGGAACCAGTTGCTAGTTAAAATAGCTAAAAGCAAGCTCAACAAGGTCCGTGATGATAAA
AATGAAAAGGTCACGAAGCCAGAGGAGCTTGTTCGTCTGTATGATCTACTGTTACAGAAT
ACTGCTGATCTTTCTGATCTAGTTAGTTCTGGAAGAGATAGAAAGATTGAAGAAGTTGCG
TTAGCTGAAGAGTGTGAGCTGAAAAGTATGGTTTTCCGAGCAGAAAGGTGCTTCTACTTA
GCAAAATCCTACAGTTCGGCGGGAAAGAGGACAGAAGCTTATGCCTTGTACTCTCGAGCT
CGTTCTTTAGCTGATGCAGCTCTTATGAAACTGCAGTCCGCGAATGCTGCTGATCTGAGC
AGATCTAACAGCTGTGCTGAGCATGCCAGAGGAATTATGGAGGAGGAAAAGGCTCCAGAA
AATCTCTCGAAAAAGATATCTAATATCTCATTGAATGGAACTGATAAGAAGATGGAGAAA
CTTCTCATGGAAAAATTGGACACATATGAATCAGCTGTTGGTGAAGCCAACGTGAAGGTT
GTTCCTCGAATTGAAACATTTCCACCTGCCTTTCAACCAGTTGCTCGTAATCCCATCGTA
TTGGACCTGGCCTATAACCTTATTGAGTTCCCATCACTGGACTCTCGTATGAAGAAAGAT
AAGAAAGGTTTCATTAGTAGGTTTTGGGGCTGA

Peptide Sequence

PEP ID

Solyc02g062810.3.1
PEP Infomation

Signal recognition particle subunit SRP68 (AHRD V3.3 *** K4B6G9_SOLLC)
Sequence

MGKQKESTAMEIEDQSSIPSDQISNLKFSVNVLQLLKSAQMQHGLRFGDYARYRRYCTAR
LRRLYKSLKFTHGRLKYTKRSISVTTVTEVRFLHLVLYTSERAWSHAMEKKTLPDGPNAR
QRSYLIGRLRKAVKWASLFQELCSIKGDSRTSLEAEAYAAYMKGSLLFEKDQNWDVALKC
FKSARAVYEELGKYGDLENQVLCRERVEELEPSIRYCLHKIGESNLQTSELVSIGEIEGP
ALDLFKAKLEAAMAEARSQQAASMTEFHWLGNRFPISNAKTRVSILKAQELEKDIHGSAA
DSLPAEKKLVLYDKIFAAYHEARSCIRNDLVTAANSENVKDELSGLDKAVGAILGQRTIE
RNQLLVKIAKSKLNKVRDDKNEKVTKPEELVRLYDLLLQNTADLSDLVSSGRDRKIEEVA
LAEECELKSMVFRAERCFYLAKSYSSAGKRTEAYALYSRARSLADAALMKLQSANAADLS
RSNSCAEHARGIMEEEKAPENLSKKISNISLNGTDKKMEKLLMEKLDTYESAVGEANVKV
VPRIETFPPAFQPVARNPIVLDLAYNLIEFPSLDSRMKKDKKGFISRFWG*

Transcript Sequence

Transcript ID

Solyc02g062810.3.1
Transcript Infomation

Signal recognition particle subunit SRP68 (AHRD V3.3 *** K4B6G9_SOLLC)
Sequence

TTATCTACTTTTATAAAATTAACGCCATTTTCTACTGTCGTCTTCTTTGTTCTTCCGTCT
GTGCACAAAAAAGGGCGAGAATCAAAGGCCATCCTCAACACCGACCCAGGTTGTGTTCCC
TGGAAGAAACAGAAAATAAATCAAATGAGAAAGTGAGGGATATGGCGATTAACTAGTTAA
AAAAAGTAAGAATCATTTTAACCCAAAAAAATGAAATTGAATCAGAAAACGCTCGGCCAT
TAGCTGGAAATGGGGAAGCAGAAGGAAAGTACTGCTATGGAAATCGAGGATCAGAGTTCT
ATTCCTTCTGACCAGATCAGTAACCTTAAGTTCTCTGTCAATGTGTTACAGCTTTTAAAA
TCTGCTCAAATGCAGCATGGACTGAGATTCGGTGATTATGCTCGTTACAGGAGGTATTGT
ACGGCTCGATTAAGGAGATTGTATAAATCACTCAAGTTTACTCACGGACGTTTGAAGTAC
ACTAAGCGTTCAATTTCAGTAACTACGGTCACCGAAGTAAGGTTTCTTCACTTGGTTCTC
TATACATCTGAAAGAGCTTGGAGTCATGCTATGGAAAAGAAAACATTGCCTGATGGACCA
AATGCACGCCAAAGAAGTTATCTGATTGGTCGGTTGAGAAAGGCGGTTAAATGGGCTAGT
CTTTTCCAGGAATTATGTTCCATCAAGGGAGATTCAAGAACATCTTTAGAAGCTGAGGCT
TATGCTGCATACATGAAAGGGAGTTTATTGTTTGAAAAAGATCAAAATTGGGACGTTGCT
CTAAAGTGTTTCAAAAGTGCCAGGGCTGTGTATGAGGAACTTGGAAAATATGGGGATCTA
GAGAACCAAGTATTGTGCCGTGAGCGAGTTGAGGAACTAGAACCTAGTATCAGATATTGC
TTACACAAGATTGGTGAGTCTAACTTACAAACTTCTGAACTCGTTTCCATCGGTGAAATT
GAAGGGCCTGCACTGGACCTTTTCAAAGCAAAGTTGGAGGCTGCTATGGCAGAGGCAAGA
TCTCAGCAGGCTGCATCTATGACAGAATTTCATTGGCTTGGAAATAGATTTCCAATTTCA
AATGCAAAGACACGTGTGTCCATCCTGAAAGCCCAGGAACTGGAGAAAGATATCCATGGT
TCAGCTGCTGATTCTCTTCCAGCAGAGAAGAAACTTGTGTTATATGACAAAATATTTGCC
GCATATCACGAAGCCAGGAGCTGCATCCGGAATGACCTGGTTACGGCTGCTAATTCAGAA
AATGTGAAGGATGAGTTAAGTGGACTGGATAAAGCCGTTGGTGCAATTTTAGGTCAGCGA
ACCATTGAGAGGAACCAGTTGCTAGTTAAAATAGCTAAAAGCAAGCTCAACAAGGTCCGT
GATGATAAAAATGAAAAGGTCACGAAGCCAGAGGAGCTTGTTCGTCTGTATGATCTACTG
TTACAGAATACTGCTGATCTTTCTGATCTAGTTAGTTCTGGAAGAGATAGAAAGATTGAA
GAAGTTGCGTTAGCTGAAGAGTGTGAGCTGAAAAGTATGGTTTTCCGAGCAGAAAGGTGC
TTCTACTTAGCAAAATCCTACAGTTCGGCGGGAAAGAGGACAGAAGCTTATGCCTTGTAC
TCTCGAGCTCGTTCTTTAGCTGATGCAGCTCTTATGAAACTGCAGTCCGCGAATGCTGCT
GATCTGAGCAGATCTAACAGCTGTGCTGAGCATGCCAGAGGAATTATGGAGGAGGAAAAG
GCTCCAGAAAATCTCTCGAAAAAGATATCTAATATCTCATTGAATGGAACTGATAAGAAG
ATGGAGAAACTTCTCATGGAAAAATTGGACACATATGAATCAGCTGTTGGTGAAGCCAAC
GTGAAGGTTGTTCCTCGAATTGAAACATTTCCACCTGCCTTTCAACCAGTTGCTCGTAAT
CCCATCGTATTGGACCTGGCCTATAACCTTATTGAGTTCCCATCACTGGACTCTCGTATG
AAGAAAGATAAGAAAGGTTTCATTAGTAGGTTTTGGGGCTGAGCTGCTTTTTTCATTGGT
CATTGATTTTTCAGTTGCACCATAGAGTTGAGTTGAGGCAATTTTATCAAATTTTTAAGC
TGCAAAATTCTTCAACATGACTTCAGAAAATTTTTCTATACCTGAGAAGTCAGAGAAAAA
TTTCATTTTATATGCACCGTGTTTTTTCTGAAGTTCTAGTTTTGGAACAAAGTTCAAAAG
AATCATTAAGAGGGCCTTCATTGGTTGCATAAAATGGTAAAAAAAGAATTTAATGTCAGT
TTATTTAATAAAAAATAGAAGCGTAAAATATACGCAAGATTTGACTATATATATCTTGTC
ATAGTAGAAGTGTAGAATGTACACAGAAAGATTACTATGTGTGAAGTAGGCGACTCAATA
CACATAGTAGTCTTTAAAAAAAAAGGAACAAAATTTCCCCATTTTTCCTCAAAATTCGTT
TTCTAGGCTTCATTGTTAGTACAATATATATACGTCCTTCTGCCTGCCTTCAAGGACTCC
ACTCCATTTCCCCATGATCAGAGGTAAATCTATAACTAATCTATTGATATTGTATATACA
TGTATAGAAAACTGTTTGCTTTTATTAAAATTATAAAATCATTTTCTAAATTCCTCTAAA
TAGTTATAGGCTAGGTTGCTTATTTTTGATTAAGGTTGAAGACTTGAAGAGACAAAAAAT
GTCTTATGATCAAAATACTA