Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g062740.3.1
CDS Infomation

cytosine-5 DNA methyltransferase5
Sequence

ATGGACAAACATCTTTCTGAAGAAGATAGTGACAACATTGACTGGGATACTGAAGATGAG
TTAGAAATACAGGATACAACATTTTCCTCATGCAGGGATTTAAGAACTAATGGACAGTAT
GCTATTAGTGGTGATGGGGAGGCAAGCTCATCATCAGTACCTGGCCAGTCTACGTTCATT
CAGAAGTTTTTAGTGATGGGATTTTCTGAAGAGTCCATTGCAAAAGCAATAGAGCAAAAT
GGAGAAAATTCAGATTTGGTGCTGGATGCTCTTTTGACATTAAAGGCCATCGAAGATTCT
CCTGAAGAACAGCCCAGTGCTAGCCCTCACCTGGAGCCCTGCATTAATTCTGATGATAGC
TCTTCTGAATACAATGAGAACTTTCTGGATGATGTTTATGATGAAGATAGTTGGTCCTCT
GACTCAGACTACTGTACAAATTCTGTTAAACAGTGCTATGTGAAAGAAGAGAGCAATTCT
TTGTCTGAAAAAGAGCAGACAATCTTATTTCTGGCAAATATGGGATACCCAGTGGAAGAG
GTTTCTATAGCAATGGAGAGATGTGGTCCAGAAGCATCGGTTTCTGAATTGACAGATTTC
ATTTGTGCTGCTCAAATGGCAAGAGAAGAAGATCCCTATTTGCCAGAAGATGTAAAGCCA
AAACTGAACCATGGTAGTGGTGGATACAAGAAGAGGAAGATGTTCAATCAGTTGTGCAAA
AGCAAAAAGCCAAGGGCGATTTTTGATGAAGAGACAATTCGTTTGCCCAAACCTATGATT
GGATTTGGGGTTCCTACAGAATCAGTTTCTGCAATTGTCCGAAGAACTATTCCGGAGCAA
GCTTTTGGCCCCCCTTTTTTCTATTACGAAAATGTTGCTCTAGCTCCAAAGGGTGTGTGG
GATACCATTTCCAGATTCCTATATGATATTGAGCCTGAGTTTGTCGATTCAAAGTATTTT
TGTGCTACTGCAAGAAAAAGGGGTTATATTCATAACCTACCTACTGAAAATAGATTTCCC
TTGCTTCCACTTCCTCCACGCACCATTAATGAGGCACTTCCCCTTACAAAGAAATGGTGG
CCATCTTGGGATCCACGGACAAAGTTAAATTGTTTGCAAACAGCTATTGGAAGTGCAAGA
TTGACTGATAGGATCAGGAAAGCTGTGGAGGCCTTTGACGGTGAGCCACCTATGAGGGTG
CAAAAGTTTGTTCTTGATCAATGTCGGAAGTGGAATTTGGTGTGGGTTGGGAGAAACAAA
GTTGCTCCTTTGGAGCCAGATGAATTTGAAATGCTATTGGGGTTTCCAAAGAACCATACC
AGGGGAGGTGGTATAAGTAGGACCGATAGATACAAATCGCTTGGTAACTCATTCCAGGTT
GACACAGTGGCATACCATTTATCAGTGTTGAAAGACATGTTTCCAAATGGGATGAACGTC
TTATCACTCTTCTCTGGGATTGGCGGTGCTGAAGTTGCTCTTTACCGTCTTGGGATTCAA
CTAAACAATGTGGTCTCTGTGGAAAAATCTGAAGTGAACAGAAACATTGTGAGAAGTTGG
TGGGAGCAAACTAATCAGAGAGGCAATCTTATTGATTTTGATGATGTGCAGCAGTTGAAT
GGAGACCGCTTAGAACAACTGATAGATTCATGTGGCGGATTTGATTTACTGATTGGTGGA
AGCCCGTGCAACAATCTTGCAGGCAGTAACAGGGTGAGCAGGGACGGTCTTGAAGGCAAA
GAATCGTCTCTATTTTATGACTATGTTCGGATACTGGACTTAGTCAAGTCCATAATGTCT
AGACAGAGATAG

Peptide Sequence

PEP ID

Solyc02g062740.3.1
PEP Infomation

cytosine-5 DNA methyltransferase5
Sequence

MDKHLSEEDSDNIDWDTEDELEIQDTTFSSCRDLRTNGQYAISGDGEASSSSVPGQSTFI
QKFLVMGFSEESIAKAIEQNGENSDLVLDALLTLKAIEDSPEEQPSASPHLEPCINSDDS
SSEYNENFLDDVYDEDSWSSDSDYCTNSVKQCYVKEESNSLSEKEQTILFLANMGYPVEE
VSIAMERCGPEASVSELTDFICAAQMAREEDPYLPEDVKPKLNHGSGGYKKRKMFNQLCK
SKKPRAIFDEETIRLPKPMIGFGVPTESVSAIVRRTIPEQAFGPPFFYYENVALAPKGVW
DTISRFLYDIEPEFVDSKYFCATARKRGYIHNLPTENRFPLLPLPPRTINEALPLTKKWW
PSWDPRTKLNCLQTAIGSARLTDRIRKAVEAFDGEPPMRVQKFVLDQCRKWNLVWVGRNK
VAPLEPDEFEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKDMFPNGMNV
LSLFSGIGGAEVALYRLGIQLNNVVSVEKSEVNRNIVRSWWEQTNQRGNLIDFDDVQQLN
GDRLEQLIDSCGGFDLLIGGSPCNNLAGSNRVSRDGLEGKESSLFYDYVRILDLVKSIMS
RQR*

Transcript Sequence

Transcript ID

Solyc02g062740.3.1
Transcript Infomation

cytosine-5 DNA methyltransferase5
Sequence

GGGTGGGTGGGTGTTCTCATCTCAGTACATTTCGATCTCTCTCTCATCACTCCACAAGAA
TCTCTCTCAACTCCTCTTCTTCCTTCGCTCTCAAATCTATGATATTAAGAAGATTTATGA
TATAGCGCAGCACGGAGTTGCTTGACACCCTTTGATCGACAAGGATTCTCAGGGTGCTCA
ATTACTCTTCGTGCTGAACACTTTAGAGTTCTTTCAGGCTTACATTGTGAAATGGACAAA
CATCTTTCTGAAGAAGATAGTGACAACATTGACTGGGATACTGAAGATGAGTTAGAAATA
CAGGATACAACATTTTCCTCATGCAGGGATTTAAGAACTAATGGACAGTATGCTATTAGT
GGTGATGGGGAGGCAAGCTCATCATCAGTACCTGGCCAGTCTACGTTCATTCAGAAGTTT
TTAGTGATGGGATTTTCTGAAGAGTCCATTGCAAAAGCAATAGAGCAAAATGGAGAAAAT
TCAGATTTGGTGCTGGATGCTCTTTTGACATTAAAGGCCATCGAAGATTCTCCTGAAGAA
CAGCCCAGTGCTAGCCCTCACCTGGAGCCCTGCATTAATTCTGATGATAGCTCTTCTGAA
TACAATGAGAACTTTCTGGATGATGTTTATGATGAAGATAGTTGGTCCTCTGACTCAGAC
TACTGTACAAATTCTGTTAAACAGTGCTATGTGAAAGAAGAGAGCAATTCTTTGTCTGAA
AAAGAGCAGACAATCTTATTTCTGGCAAATATGGGATACCCAGTGGAAGAGGTTTCTATA
GCAATGGAGAGATGTGGTCCAGAAGCATCGGTTTCTGAATTGACAGATTTCATTTGTGCT
GCTCAAATGGCAAGAGAAGAAGATCCCTATTTGCCAGAAGATGTAAAGCCAAAACTGAAC
CATGGTAGTGGTGGATACAAGAAGAGGAAGATGTTCAATCAGTTGTGCAAAAGCAAAAAG
CCAAGGGCGATTTTTGATGAAGAGACAATTCGTTTGCCCAAACCTATGATTGGATTTGGG
GTTCCTACAGAATCAGTTTCTGCAATTGTCCGAAGAACTATTCCGGAGCAAGCTTTTGGC
CCCCCTTTTTTCTATTACGAAAATGTTGCTCTAGCTCCAAAGGGTGTGTGGGATACCATT
TCCAGATTCCTATATGATATTGAGCCTGAGTTTGTCGATTCAAAGTATTTTTGTGCTACT
GCAAGAAAAAGGGGTTATATTCATAACCTACCTACTGAAAATAGATTTCCCTTGCTTCCA
CTTCCTCCACGCACCATTAATGAGGCACTTCCCCTTACAAAGAAATGGTGGCCATCTTGG
GATCCACGGACAAAGTTAAATTGTTTGCAAACAGCTATTGGAAGTGCAAGATTGACTGAT
AGGATCAGGAAAGCTGTGGAGGCCTTTGACGGTGAGCCACCTATGAGGGTGCAAAAGTTT
GTTCTTGATCAATGTCGGAAGTGGAATTTGGTGTGGGTTGGGAGAAACAAAGTTGCTCCT
TTGGAGCCAGATGAATTTGAAATGCTATTGGGGTTTCCAAAGAACCATACCAGGGGAGGT
GGTATAAGTAGGACCGATAGATACAAATCGCTTGGTAACTCATTCCAGGTTGACACAGTG
GCATACCATTTATCAGTGTTGAAAGACATGTTTCCAAATGGGATGAACGTCTTATCACTC
TTCTCTGGGATTGGCGGTGCTGAAGTTGCTCTTTACCGTCTTGGGATTCAACTAAACAAT
GTGGTCTCTGTGGAAAAATCTGAAGTGAACAGAAACATTGTGAGAAGTTGGTGGGAGCAA
ACTAATCAGAGAGGCAATCTTATTGATTTTGATGATGTGCAGCAGTTGAATGGAGACCGC
TTAGAACAACTGATAGATTCATGTGGCGGATTTGATTTACTGATTGGTGGAAGCCCGTGC
AACAATCTTGCAGGCAGTAACAGGGTGAGCAGGGACGGTCTTGAAGGCAAAGAATCGTCT
CTATTTTATGACTATGTTCGGATACTGGACTTAGTCAAGTCCATAATGTCTAGACAGAGA
TAGTATGACAGAAATTCGTTCTAGCTTCAGATTCTTAGTTATCTTTCAAAATTATGAAAC
ATTACATTAAGGGATAAAGCCATCACATAAAATTTCTGGCTTAAGATTCTACATCGACTG
GTCTCCTACAATACCAGTTGATGAGCATTCTATTTCGCTTTGAAGCGAAAACAAACATGA
AGTGTAAAGTACATTGTTACTATTAGTTATTGGCCTAACATGCCATTTCAGTTGATGAGC
ATGCACAGTTACAGTGTTGTATCCTCCATGAATAATATTCTGGAATTTGCACAAGAAAGC
TCTGCACTTGAATCTCAATGTTATTTTTTCTCAAAAATAAAGAGTTTTACTTTTACCATG
ACAATATGACTTAAGTTTTTTTGAACACGATTTGGTCCCCTAAAAAGGATTGTCTTACTA
TTAAACCTTGTTGCCTGGAAAATGAAGTACACAACTTTTTTCTTATAGCTACTTACTCTT
ATAATATGTAGACACTAAATATTTTAGAAACTAATATAAATGCAAAGCTTTTTTTCTCTG
CTAAAGTTCCTGTGTAATAATATTAGATACTATATGCATATCCCAACTTTCATGATCATA
ATAACATATCTAATTTTCATTTTAGATTGTCTTATAAGCGCAAGAAAGTTATATAAATTT
GGTCTGTCGACTATTATTTTTAATTATGAATATATTCACGTAAGAGCCACATAGGATGAT
AAAAGTGGAGTGAGGCGACTTAACCGTTCAAGGGCAAATATGTATCCAAAGCTGGATGAT
ATAAGTGTAGAGACAAGGCTTAACCGTTCAAAGGCAAATAAGTGTCCAAAGTTGAACTAC