Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g062700.3.1
CDS Infomation

AAA-type ATPase family protein (AHRD V3.3 *** AT2G18330.1)
Sequence

ATGGCAGCTTCGAAGTTGTCTTCAATGGCAGCAATGGCAGCTGCAGCTGCCATTGCTGCT
ACATCTTCCACTATCCCAAACCGTGCATACGCTGACTCTCCATTTCGTTTCAACCCTTTT
TCATCTCCATCTCCTTCTGTGCCTTCATCTTCTTCAGAGTCTCCTCAGGCCGACTCTTCC
GAGTCAGATGCAAAGGATTCTTCTGAAGATTCAAGAGGTGGGTTCAACCCGGAATCCTTA
GAAAGGGGTGCAAAAGCCCTTAGGGAAATCAATAGTTCTCCTTATCACAAGCAGGTGTAT
GATGTGATGAGAAAGCAGGAAAAAACCCGGCTTGCAGATATTGCTGCGGAAAAAGTTCAT
TTTGAGGCAATCCAGGCTCATGCAGATATTGATAAACAGCGACAATGGGGAGAAGACCAG
CGGAATCTTTACCAACAACAATCACAAGCCAAGGCACAAATGTTAAGATATGAAGATGAA
TTGGCTAGGAAAAGAATGCAGACTGATCACGAAGCTCAAAGGAGACACAATGCTGAACTG
GTTAAAATGCAAGAGGAGTCATCACTACGAAAAGAGCAAGCTAGACGAGCAACAGAAGAT
CAAATTCAAGCACAACAAAGACAAACTGAAAAGGAGAGAGCTGAAATAGAACGAGAAACA
GTAAGAGTGAAGGCCATGGCTGAGGCAGAAGGTAGGGCACATGAAGCTAAACTGACTGAA
GATCATAAAAGGAGGATGCTGATGGAAAGAATAAATGGTGAAAGAGAGAAGTGGCTTGCA
GCCATTAATACAACTTTCAGTCATGTTGAAGAGGGCTTCCGGATTCTATTGACTGATAGG
AGTAAATTGGTAATGACTGTTGGCGGAGTCACTGCATTGGCTGCTGGAGTTTATACCACC
AGGGAAGGTGCAAGAGTTACCTGGGGATATATTAACAGAATTCTTGGTCAACCATCATTA
ATTCGTGAATCATCCATGTCAAGATTTCCTTGGTCAGGGATGATTTCTCAAGTAGCAAAC
AAAGGACTCAAATTTGGTACAGCTGCTGGATTGTCAGCAACTGGACAAAGTTCATCTGCT
TTTGGGAACATTATTCTGCATCCTTCTCTTCAGAGGAGAATAGAACACCTTGCTAGGGCC
ACAGCAAACACCAAGTCTCACCAGGCACCATTTCGCAATATGCTCTTTTATGGTCCTCCT
GGCACTGGGAAAACAATGGTTGCAAGGGAAATAGCAAGAAAATCGGGTTTGGACTATGCT
ATGATGACCGGAGGAGATGTTGCACCCCTGGGTGCACAGGCGGTCACCAAAATTCATGAG
ATATTTGATTGGGCCAAAAAATCAAAGAAAGGCTTACTACTTTTCATTGATGAGGCTGAT
GCATTTTTGTGCGAGCGGAATAGTACATACATGAGTGAAGCTCAGCGAAGTGCTTTGAAT
GCTTTACTCTTTCGGACAGGTGACCAGTCACGAGACGTAGTTCTTGTCCTCGCTACCAAC
AGACCAGGAGACCTTGACAGTGCTGTCACTGACCGTATAGATGAAGTTATTGAATTCCCT
CTACCTCAAGAGGATGAGCGTTTCCAATTGCTGAAGCTCTATTTGAACAAGTACCTTGCT
GGTGAAGGTGACAGTGACAGCGATTCTAAGTGGGGACACCTCTTCAAGAAGAGCCCGCAA
AGGATAACCATAAAAGATTTGTCTGATGAGGTGATTAGAGAGGCTGCTAAGAAGACAGAA
GGATTCTCTGGGCGTGAGATTGCAAAACTTGTGGCAAGTGTTCAAGCAACTGTATATGGG
AGCCCAGACTGCGTTCTTGATTCTCAACTATTCAGGGAAATTGTAGATTACAAGGTCGCG
GAGCATCACCAACGAATAAAACTAGCTGCTGAAGGGGCTGAGCCAACCTACCAGGGGAAT
TAA

Peptide Sequence

PEP ID

Solyc02g062700.3.1
PEP Infomation

AAA-type ATPase family protein (AHRD V3.3 *** AT2G18330.1)
Sequence

MAASKLSSMAAMAAAAAIAATSSTIPNRAYADSPFRFNPFSSPSPSVPSSSSESPQADSS
ESDAKDSSEDSRGGFNPESLERGAKALREINSSPYHKQVYDVMRKQEKTRLADIAAEKVH
FEAIQAHADIDKQRQWGEDQRNLYQQQSQAKAQMLRYEDELARKRMQTDHEAQRRHNAEL
VKMQEESSLRKEQARRATEDQIQAQQRQTEKERAEIERETVRVKAMAEAEGRAHEAKLTE
DHKRRMLMERINGEREKWLAAINTTFSHVEEGFRILLTDRSKLVMTVGGVTALAAGVYTT
REGARVTWGYINRILGQPSLIRESSMSRFPWSGMISQVANKGLKFGTAAGLSATGQSSSA
FGNIILHPSLQRRIEHLARATANTKSHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYA
MMTGGDVAPLGAQAVTKIHEIFDWAKKSKKGLLLFIDEADAFLCERNSTYMSEAQRSALN
ALLFRTGDQSRDVVLVLATNRPGDLDSAVTDRIDEVIEFPLPQEDERFQLLKLYLNKYLA
GEGDSDSDSKWGHLFKKSPQRITIKDLSDEVIREAAKKTEGFSGREIAKLVASVQATVYG
SPDCVLDSQLFREIVDYKVAEHHQRIKLAAEGAEPTYQGN*

Transcript Sequence

Transcript ID

Solyc02g062700.3.1
Transcript Infomation

AAA-type ATPase family protein (AHRD V3.3 *** AT2G18330.1)
Sequence

CATACCAGACATTGAAGAACTCTGTTAAGCTTCACGTCAATGTTGTATTCGATCTTCTTT
TGATTCGAGCAAGAAGTTGCTTTGTTAATAATGGCAGCTTCGAAGTTGTCTTCAATGGCA
GCAATGGCAGCTGCAGCTGCCATTGCTGCTACATCTTCCACTATCCCAAACCGTGCATAC
GCTGACTCTCCATTTCGTTTCAACCCTTTTTCATCTCCATCTCCTTCTGTGCCTTCATCT
TCTTCAGAGTCTCCTCAGGCCGACTCTTCCGAGTCAGATGCAAAGGATTCTTCTGAAGAT
TCAAGAGGTGGGTTCAACCCGGAATCCTTAGAAAGGGGTGCAAAAGCCCTTAGGGAAATC
AATAGTTCTCCTTATCACAAGCAGGTGTATGATGTGATGAGAAAGCAGGAAAAAACCCGG
CTTGCAGATATTGCTGCGGAAAAAGTTCATTTTGAGGCAATCCAGGCTCATGCAGATATT
GATAAACAGCGACAATGGGGAGAAGACCAGCGGAATCTTTACCAACAACAATCACAAGCC
AAGGCACAAATGTTAAGATATGAAGATGAATTGGCTAGGAAAAGAATGCAGACTGATCAC
GAAGCTCAAAGGAGACACAATGCTGAACTGGTTAAAATGCAAGAGGAGTCATCACTACGA
AAAGAGCAAGCTAGACGAGCAACAGAAGATCAAATTCAAGCACAACAAAGACAAACTGAA
AAGGAGAGAGCTGAAATAGAACGAGAAACAGTAAGAGTGAAGGCCATGGCTGAGGCAGAA
GGTAGGGCACATGAAGCTAAACTGACTGAAGATCATAAAAGGAGGATGCTGATGGAAAGA
ATAAATGGTGAAAGAGAGAAGTGGCTTGCAGCCATTAATACAACTTTCAGTCATGTTGAA
GAGGGCTTCCGGATTCTATTGACTGATAGGAGTAAATTGGTAATGACTGTTGGCGGAGTC
ACTGCATTGGCTGCTGGAGTTTATACCACCAGGGAAGGTGCAAGAGTTACCTGGGGATAT
ATTAACAGAATTCTTGGTCAACCATCATTAATTCGTGAATCATCCATGTCAAGATTTCCT
TGGTCAGGGATGATTTCTCAAGTAGCAAACAAAGGACTCAAATTTGGTACAGCTGCTGGA
TTGTCAGCAACTGGACAAAGTTCATCTGCTTTTGGGAACATTATTCTGCATCCTTCTCTT
CAGAGGAGAATAGAACACCTTGCTAGGGCCACAGCAAACACCAAGTCTCACCAGGCACCA
TTTCGCAATATGCTCTTTTATGGTCCTCCTGGCACTGGGAAAACAATGGTTGCAAGGGAA
ATAGCAAGAAAATCGGGTTTGGACTATGCTATGATGACCGGAGGAGATGTTGCACCCCTG
GGTGCACAGGCGGTCACCAAAATTCATGAGATATTTGATTGGGCCAAAAAATCAAAGAAA
GGCTTACTACTTTTCATTGATGAGGCTGATGCATTTTTGTGCGAGCGGAATAGTACATAC
ATGAGTGAAGCTCAGCGAAGTGCTTTGAATGCTTTACTCTTTCGGACAGGTGACCAGTCA
CGAGACGTAGTTCTTGTCCTCGCTACCAACAGACCAGGAGACCTTGACAGTGCTGTCACT
GACCGTATAGATGAAGTTATTGAATTCCCTCTACCTCAAGAGGATGAGCGTTTCCAATTG
CTGAAGCTCTATTTGAACAAGTACCTTGCTGGTGAAGGTGACAGTGACAGCGATTCTAAG
TGGGGACACCTCTTCAAGAAGAGCCCGCAAAGGATAACCATAAAAGATTTGTCTGATGAG
GTGATTAGAGAGGCTGCTAAGAAGACAGAAGGATTCTCTGGGCGTGAGATTGCAAAACTT
GTGGCAAGTGTTCAAGCAACTGTATATGGGAGCCCAGACTGCGTTCTTGATTCTCAACTA
TTCAGGGAAATTGTAGATTACAAGGTCGCGGAGCATCACCAACGAATAAAACTAGCTGCT
GAAGGGGCTGAGCCAACCTACCAGGGGAATTAACTAGCCCCACAGAGATAACATATAATT
TTTTATTGACATGAACTGTTGAAATTTTGTTTTTCTCGCCTCGCAAAATTCATTTTTTTT
CGATGTTAAGATTATGTAGTTTAGGGTCTACCTTTCCTATCCCAGTGATTGGAAAACATT
GAGGGGTAGTAGCTCCTTGGACTGTAATTGTATCGAGTTTATTATGCACCACAGGCTCCA
TCAAAATAAGTTAATTTAGAAACCAACTTGTTATATGTTTGGCTAATAGTAATGAGGATG
TGAAGTATGAATCTTTATGGAGGGTCTTATCTGAAACAACTATAC