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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g062550.3.1
CDS Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT3G50940.1)
Sequence

ATGTCTTCTGCAGAATCGAAAATGGCACTTGCCAAGACCGTCTTATCTACAGTAGGCTCT
GTTGCTGCAACAACCATGGTTGTTCGGACCGTTGCAAATGAGTTGCTGCCGCAAGAATTG
TATGATTATCTCTTCTTTGGCCTCAAAAACCTCTTCAGCAGGTTCTCAAATCAGCTAACA
ATGGTAATTGACGAATTTGATGGCTTGGTCAACAATGAAATCTATGAAGCAGCTGAAATG
TACTTGGGTAACAAGTTGTCAACCAACACCAGGCGAGTCAAAATCAGCAAGCCTGAGAAG
GAGAAACGGTTCAGCATAACATTGGAACACGACGAGGAGGTGACAGATGTTTACAGTGGG
CAGAAATTCCAGTGGGTTTGGCTTAGCAAAAAAGTAGAATCTCGAGACTTTTATAATCCC
AGAAGCATGAATTCCACTTTAAGATCTGAGGTCAGATCCTTTGAGCTCACATTTCACAAG
AAAAACAAGGAACTTGTCCTTAATTCATACTTGCCTTACATCATAGGAGAGGCAAAACTG
AGAGAACTCGAGAACAGGGCAATCAAGATTCACACTGTGGATTACCAATCCATTTATAAT
TTACATGATATATGGGAGGCGATCAATCTTGATCACCCGGCAACCTTTGAGACTCTGGCA
ATGGACTCAGAGGTGAAAGACAAAATTATAAAGGATTTAGACAGATTTGTGAAGAGAAAA
GATTATTATAGGAAAGTAGGAAAAGCATGGAAAAGAGGATACTTGATGTATGGTCCTCCA
GGGACAGGAAAATCCAGTTTGGTCGCTGCTATGGCTAATTACTTGAACTTTGATATATAT
GATTTGGAGTTGACTGAGGTGATGAGAAACTCTGATTTAAGACGGCTGCTTGTGGCCACG
GCTAATAAGTCCATCTTGGTGGTCGAAGACATTGACTGTACCATTGATTTGCAAACTAAT
TTGGCTAATCGAACAAATGATTCTCCTCCAGATGGTTCTAATCAACAAGAAACCAAGGTA
ACATTATCTGGTTTATTGAATTTCATCGATGGATTATGGTCGAGCTGTGGTGACGAAAGG
ATCATAATTTTCACAACAAATCACATAGAAAAGCTTGACCCTGCATTGTTGAGGCCTGGC
AGGATGGACATGCACATTCATTTGTCATATTGTACTCCCAGTGGCTTCAGGCTTCTTGCT
GCTAATTACCTGGAAACTAGAGAGCACAAATTGTTCAAACAAATTGAAGAACTCGTAGAA
ACTGCGATGGTGACGCCAGCCCAGGTGGCTGAGCAACTGTTGAAGGAAGATGAGGTTGAT
GTTTCACTTGATGGCTTAATTAGTTTTCTACACGTAAAGATTAAGGAAAAGGAAGAAGCC
AAGTCTAAGAAAGTAGAGGCAACAGAATTGGATACAAATGAGAAGAAGATAAGTGATGAA
AAAGGAATTGAAGAAAACTTAGAAGAAAAAAAGATTACTAATGAGAAGTAA

Peptide Sequence

PEP ID

Solyc02g062550.3.1
PEP Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT3G50940.1)
Sequence

MSSAESKMALAKTVLSTVGSVAATTMVVRTVANELLPQELYDYLFFGLKNLFSRFSNQLT
MVIDEFDGLVNNEIYEAAEMYLGNKLSTNTRRVKISKPEKEKRFSITLEHDEEVTDVYSG
QKFQWVWLSKKVESRDFYNPRSMNSTLRSEVRSFELTFHKKNKELVLNSYLPYIIGEAKL
RELENRAIKIHTVDYQSIYNLHDIWEAINLDHPATFETLAMDSEVKDKIIKDLDRFVKRK
DYYRKVGKAWKRGYLMYGPPGTGKSSLVAAMANYLNFDIYDLELTEVMRNSDLRRLLVAT
ANKSILVVEDIDCTIDLQTNLANRTNDSPPDGSNQQETKVTLSGLLNFIDGLWSSCGDER
IIIFTTNHIEKLDPALLRPGRMDMHIHLSYCTPSGFRLLAANYLETREHKLFKQIEELVE
TAMVTPAQVAEQLLKEDEVDVSLDGLISFLHVKIKEKEEAKSKKVEATELDTNEKKISDE
KGIEENLEEKKITNEK*

Transcript Sequence

Transcript ID

Solyc02g062550.3.1
Transcript Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT3G50940.1)
Sequence

ATGTCTTCTGCAGAATCGAAAATGGCACTTGCCAAGACCGTCTTATCTACAGTAGGCTCT
GTTGCTGCAACAACCATGGTTGTTCGGACCGTTGCAAATGAGTTGCTGCCGCAAGAATTG
TATGATTATCTCTTCTTTGGCCTCAAAAACCTCTTCAGCAGGTTCTCAAATCAGCTAACA
ATGGTAATTGACGAATTTGATGGCTTGGTCAACAATGAAATCTATGAAGCAGCTGAAATG
TACTTGGGTAACAAGTTGTCAACCAACACCAGGCGAGTCAAAATCAGCAAGCCTGAGAAG
GAGAAACGGTTCAGCATAACATTGGAACACGACGAGGAGGTGACAGATGTTTACAGTGGG
CAGAAATTCCAGTGGGTTTGGCTTAGCAAAAAAGTAGAATCTCGAGACTTTTATAATCCC
AGAAGCATGAATTCCACTTTAAGATCTGAGGTCAGATCCTTTGAGCTCACATTTCACAAG
AAAAACAAGGAACTTGTCCTTAATTCATACTTGCCTTACATCATAGGAGAGGCAAAACTG
AGAGAACTCGAGAACAGGGCAATCAAGATTCACACTGTGGATTACCAATCCATTTATAAT
TTACATGATATATGGGAGGCGATCAATCTTGATCACCCGGCAACCTTTGAGACTCTGGCA
ATGGACTCAGAGGTGAAAGACAAAATTATAAAGGATTTAGACAGATTTGTGAAGAGAAAA
GATTATTATAGGAAAGTAGGAAAAGCATGGAAAAGAGGATACTTGATGTATGGTCCTCCA
GGGACAGGAAAATCCAGTTTGGTCGCTGCTATGGCTAATTACTTGAACTTTGATATATAT
GATTTGGAGTTGACTGAGGTGATGAGAAACTCTGATTTAAGACGGCTGCTTGTGGCCACG
GCTAATAAGTCCATCTTGGTGGTCGAAGACATTGACTGTACCATTGATTTGCAAACTAAT
TTGGCTAATCGAACAAATGATTCTCCTCCAGATGGTTCTAATCAACAAGAAACCAAGGTA
ACATTATCTGGTTTATTGAATTTCATCGATGGATTATGGTCGAGCTGTGGTGACGAAAGG
ATCATAATTTTCACAACAAATCACATAGAAAAGCTTGACCCTGCATTGTTGAGGCCTGGC
AGGATGGACATGCACATTCATTTGTCATATTGTACTCCCAGTGGCTTCAGGCTTCTTGCT
GCTAATTACCTGGAAACTAGAGAGCACAAATTGTTCAAACAAATTGAAGAACTCGTAGAA
ACTGCGATGGTGACGCCAGCCCAGGTGGCTGAGCAACTGTTGAAGGAAGATGAGGTTGAT
GTTTCACTTGATGGCTTAATTAGTTTTCTACACGTAAAGATTAAGGAAAAGGAAGAAGCC
AAGTCTAAGAAAGTAGAGGCAACAGAATTGGATACAAATGAGAAGAAGATAAGTGATGAA
AAAGGAATTGAAGAAAACTTAGAAGAAAAAAAGATTACTAATGAGAAGTAAAAGCCACAA
AAAGAGTTGGCTCTACCTAACATGTCAATATTTGGATAATACGTAGCAAGATTTTGTTCG
ATTAACGTTACTAATTAAATTCAAATTTAGTAACACTTATATAAGCAACAAAAAATAATA
CAATTCTAAATGCAGGTTTCTGGTTTTCTTAGTTGTAACCTTTCATTTAGAAGTCAATTT
TTTTATTAGGTTAGTTGTTTTCACCATTATATATTTTGGA