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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g062040.3.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT4G35840.1)
Sequence

ATGGAAATGGAATTCTACGCATACCCATCTCGTGTTTTCCCTCTTACCTCTTCTATTTGT
TCGTTTTGTATAAGGGATTTGGTTGATAGGGCTAAAGATTTCATTAGCGTTGCGGTTTCT
GCAATCATTGGCAGCGTCTTATCTGCAGTCTTCACCTTCTTCTTTGCATTAGTGGGCACT
TTATTAGGAGCATTGACTGGAGCTTTGATTGGCCAGGAGACGGAGAGTGGATTTGTCAGA
GGTGCTGCAGTTGGTGCCATCTCTGGTGCTGTTTTCTCTCTCGAAGTCTTTGAGTCATCT
CTGTTACTATGGCAGTCGGATGAATCTGGAATAACATGTCTTGTTTACTTGATTGATGTA
CTCACAAGCCTGTTAAGTGGTCGATTGGTTCGTGAGAGGATTGGCCCAGCAATGCTAAGT
GCAGTCCAGAGTCAGATGGGAGCTGTTGAACTTGCATATGACGAGGTCCCTAACATTTTT
GATACGGGTGTGGCTAAAGGCTTGCATGGAGATTCGGTTGAAAAGATCCCCAAGATTGTA
ATCACAAAAGGTAACAACTTGGATGGTTCTGGAGAGAGAGTCTCTTGTTCCGTCTGCCTT
CAGGACTTTCAACTTGGAGAAACTGTTAGATGTTTGCCACAATGTCATCACATGTTTCAC
TTGCCATGCATCGACACATGGCTGTTGAGACATGGCTCTTGCCCAATGTGCAGAAGGGAT
CTGTAA

Peptide Sequence

PEP ID

Solyc02g062040.3.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT4G35840.1)
Sequence

MEMEFYAYPSRVFPLTSSICSFCIRDLVDRAKDFISVAVSAIIGSVLSAVFTFFFALVGT
LLGALTGALIGQETESGFVRGAAVGAISGAVFSLEVFESSLLLWQSDESGITCLVYLIDV
LTSLLSGRLVRERIGPAMLSAVQSQMGAVELAYDEVPNIFDTGVAKGLHGDSVEKIPKIV
ITKGNNLDGSGERVSCSVCLQDFQLGETVRCLPQCHHMFHLPCIDTWLLRHGSCPMCRRD
L*

Transcript Sequence

Transcript ID

Solyc02g062040.3.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT4G35840.1)
Sequence

GATAAATCTAAAATAGAAAAAATGAATTTTAATTATTCATCTCAATTAATTATTATTTTC
TTAATATATATGTCAATTGAAAAGCGAAAAGATAATTAGAGAGCGAATACTTTACATTGG
TAACAACCATGGAAAAAGTATGAAAATTACAACCTATCATTTTTGCATTGTTAGCTTATC
AAAATCACAATTTATTGGAATAGAAGTTATGTCTAACCTCAAATTGATTTTATGAAATTA
TGACTTTCTTTGCGTTTGTAAAGCTTTGGCATCAACAAGCAAACATCTTTTTCTCTATTT
TCAAACGAAGACTAGTTCCACTTTTTTCTTGAAATCTTTTGAAAAAAATGAAGGCAGAAA
GACTTTTTATTTTCGTCCTTCCTTGTTGGAAGAAATAGAATGGAGTTCCCTTCAGAATAA
GCAGTTGATTTATGTAAATCAGAAAAAGGCCAAGTCTTTTGTTGTTGATCGTTCAAAAGA
ATCCATGGAAATGGAATTCTACGCATACCCATCTCGTGTTTTCCCTCTTACCTCTTCTAT
TTGTTCGTTTTGTATAAGGGATTTGGTTGATAGGGCTAAAGATTTCATTAGCGTTGCGGT
TTCTGCAATCATTGGCAGCGTCTTATCTGCAGTCTTCACCTTCTTCTTTGCATTAGTGGG
CACTTTATTAGGAGCATTGACTGGAGCTTTGATTGGCCAGGAGACGGAGAGTGGATTTGT
CAGAGGTGCTGCAGTTGGTGCCATCTCTGGTGCTGTTTTCTCTCTCGAAGTCTTTGAGTC
ATCTCTGTTACTATGGCAGTCGGATGAATCTGGAATAACATGTCTTGTTTACTTGATTGA
TGTACTCACAAGCCTGTTAAGTGGTCGATTGGTTCGTGAGAGGATTGGCCCAGCAATGCT
AAGTGCAGTCCAGAGTCAGATGGGAGCTGTTGAACTTGCATATGACGAGGTCCCTAACAT
TTTTGATACGGGTGTGGCTAAAGGCTTGCATGGAGATTCGGTTGAAAAGATCCCCAAGAT
TGTAATCACAAAAGGTAACAACTTGGATGGTTCTGGAGAGAGAGTCTCTTGTTCCGTCTG
CCTTCAGGACTTTCAACTTGGAGAAACTGTTAGATGTTTGCCACAATGTCATCACATGTT
TCACTTGCCATGCATCGACACATGGCTGTTGAGACATGGCTCTTGCCCAATGTGCAGAAG
GGATCTGTAATTGCTCCATAAACTATAACAAGGTTAAATAAGTTCTTCATACTTGCTTGT
ATGGTTTCCTTAGTAGTCTTTCTTCACTTGCCCAAATTTTCAAGGAAACCTGTGTATTTA
GTGGCAAGTATGTGCTTTTTCGAGTTTGGTTGTTGTAGACTATAACTTACCTGTAAATTG
AGCTATAATAGTGTTCACTACTTCCACTAAATGGTATTCTCTATCAATGTGTCTCATGTT
TGCAAGAA