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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g061610.1.1
CDS Infomation

Ubiquitin 1 (AHRD V3.3 *** E9P1L2_MUSAC)
Sequence

ATGGACGGAGGTGATACTACTCAAACGGTGAAAGACGATTCCGGCGACATCGCCGTCGGT
GGTAAAACGGTCACCATCAACATCCGATGTGTCAATGACTCTGAGTTATCTGTTCAAGTC
AGCCTCGATTGCACCGTCGGATTATTCAAGTTCATCATTTCCCAGCCAACTGATATCCCT
GCTGAGGAGCAGAAAGTTATCTATAACGGCCGGATCTTAAAGGATGATCAAACCCTAAAA
AGCTGTGGTCTGGAGGCAGACCAAACAGTTCATCTTATTCGAGGTTCTGCCGTAGCTGCT
TCTGCTAGTGCAACCAATGTTGTAAATCCAAATGCTAATCAGGATGCTCCCAGGGTTGAT
GTTCCCACTACAGGGGGGCTGTTTGTCAGGGTCGGTAGAGGTCCACTCTTTTCTAGACTT
GGAAAAAGAGGTGGTTCGTTTGGAGCTGGACTTCCAGATTTTGAGCAGGTCCAACAACAT
GACTCCATCATGATGAGAGAGATATTGAATATGCCTCTAGTTCAGGATCTAGTGAATGAC
CCAGGAATCATCTGCAACTTTATCGTGAACAGTCCTCAAATGCGAGAGTATGTGAATCTT
AATCCCGAGCTTCCACACATATTCAATGACCCTGCTATATTTCTCCAGATATGGGAGGCT
GCACGTAATGAACTCATGCATGAGACGATAAGAACTATTCAATGGTCATTGAGCCACACT
GAATCGTCTCCTGAGGAATCTAACATGCTAAGGCACATGTATGTGGATGTCCAAGAGCCA
TTTCTGAATGCAACAAGCATGGCTGGAGATACAAGAAATGATTCAGGGATCAACCCGTTC
GTGGCTCTTTTGGGAGCCCAGGAACAAGGCAGAAGCCGGTCAACTAACCCTCCAGCTACT
TGTTCTGATACAACTGCTAATCCTCCTGCTCCAAACTCGAACCCACTTTCGGATCCTTGG
GCATCAGCTGACTTTGGAGGTGCCCAAATGAATACCTCTCCCAGATCAAATACTTCTAGG
AATATTTGGGGACCCTCTCCTGGTGGTTTGGATGACATAGCAGATTTGCAGCGAATGCTA
GGTGGCATACCTGGCGCCTCTTCTGAAAATCAGTTAATAGGATACCCATCCATCTCGCAG
ATAATGCAGCACATAAACCAGATTATGGAGCTCGACCCCAACTCTCATAATGGGGATATG
ATGCCAAATCGTGAATTAATTCATCAGTTGATGTCCTCTGAGAGGATGCAGGAATATCTG
GTACAACAAGGGCTATTTCCTTACCTTGATCATCCGCAATCAAACCAAGAACAAGATCAG
GGTGAAGCTGACGAAACAGAATATCAGAATGGGGCAGTGGAAGTGGCGAGGAACGTGGTT
GATAGTACTCTAGAGAGGGCAAGTTTGCATGAATTCCCCGGATTAAATAATTTAGGCCCA
GAAGAATTATATGTTATGCTGTTTCTCCAGGTCGTTAGACTACATCGGATTCTTTGA

Peptide Sequence

PEP ID

Solyc02g061610.1.1
PEP Infomation

Ubiquitin 1 (AHRD V3.3 *** E9P1L2_MUSAC)
Sequence

MDGGDTTQTVKDDSGDIAVGGKTVTINIRCVNDSELSVQVSLDCTVGLFKFIISQPTDIP
AEEQKVIYNGRILKDDQTLKSCGLEADQTVHLIRGSAVAASASATNVVNPNANQDAPRVD
VPTTGGLFVRVGRGPLFSRLGKRGGSFGAGLPDFEQVQQHDSIMMREILNMPLVQDLVND
PGIICNFIVNSPQMREYVNLNPELPHIFNDPAIFLQIWEAARNELMHETIRTIQWSLSHT
ESSPEESNMLRHMYVDVQEPFLNATSMAGDTRNDSGINPFVALLGAQEQGRSRSTNPPAT
CSDTTANPPAPNSNPLSDPWASADFGGAQMNTSPRSNTSRNIWGPSPGGLDDIADLQRML
GGIPGASSENQLIGYPSISQIMQHINQIMELDPNSHNGDMMPNRELIHQLMSSERMQEYL
VQQGLFPYLDHPQSNQEQDQGEADETEYQNGAVEVARNVVDSTLERASLHEFPGLNNLGP
EELYVMLFLQVVRLHRIL*

Transcript Sequence

Transcript ID

Solyc02g061610.1.1
Transcript Infomation

Ubiquitin 1 (AHRD V3.3 *** E9P1L2_MUSAC)
Sequence

ATGGACGGAGGTGATACTACTCAAACGGTGAAAGACGATTCCGGCGACATCGCCGTCGGT
GGTAAAACGGTCACCATCAACATCCGATGTGTCAATGACTCTGAGTTATCTGTTCAAGTC
AGCCTCGATTGCACCGTCGGATTATTCAAGTTCATCATTTCCCAGCCAACTGATATCCCT
GCTGAGGAGCAGAAAGTTATCTATAACGGCCGGATCTTAAAGGATGATCAAACCCTAAAA
AGCTGTGGTCTGGAGGCAGACCAAACAGTTCATCTTATTCGAGGTTCTGCCGTAGCTGCT
TCTGCTAGTGCAACCAATGTTGTAAATCCAAATGCTAATCAGGATGCTCCCAGGGTTGAT
GTTCCCACTACAGGGGGGCTGTTTGTCAGGGTCGGTAGAGGTCCACTCTTTTCTAGACTT
GGAAAAAGAGGTGGTTCGTTTGGAGCTGGACTTCCAGATTTTGAGCAGGTCCAACAACAT
GACTCCATCATGATGAGAGAGATATTGAATATGCCTCTAGTTCAGGATCTAGTGAATGAC
CCAGGAATCATCTGCAACTTTATCGTGAACAGTCCTCAAATGCGAGAGTATGTGAATCTT
AATCCCGAGCTTCCACACATATTCAATGACCCTGCTATATTTCTCCAGATATGGGAGGCT
GCACGTAATGAACTCATGCATGAGACGATAAGAACTATTCAATGGTCATTGAGCCACACT
GAATCGTCTCCTGAGGAATCTAACATGCTAAGGCACATGTATGTGGATGTCCAAGAGCCA
TTTCTGAATGCAACAAGCATGGCTGGAGATACAAGAAATGATTCAGGGATCAACCCGTTC
GTGGCTCTTTTGGGAGCCCAGGAACAAGGCAGAAGCCGGTCAACTAACCCTCCAGCTACT
TGTTCTGATACAACTGCTAATCCTCCTGCTCCAAACTCGAACCCACTTTCGGATCCTTGG
GCATCAGCTGACTTTGGAGGTGCCCAAATGAATACCTCTCCCAGATCAAATACTTCTAGG
AATATTTGGGGACCCTCTCCTGGTGGTTTGGATGACATAGCAGATTTGCAGCGAATGCTA
GGTGGCATACCTGGCGCCTCTTCTGAAAATCAGTTAATAGGATACCCATCCATCTCGCAG
ATAATGCAGCACATAAACCAGATTATGGAGCTCGACCCCAACTCTCATAATGGGGATATG
ATGCCAAATCGTGAATTAATTCATCAGTTGATGTCCTCTGAGAGGATGCAGGAATATCTG
GTACAACAAGGGCTATTTCCTTACCTTGATCATCCGCAATCAAACCAAGAACAAGATCAG
GGTGAAGCTGACGAAACAGAATATCAGAATGGGGCAGTGGAAGTGGCGAGGAACGTGGTT
GATAGTACTCTAGAGAGGGCAAGTTTGCATGAATTCCCCGGATTAAATAATTTAGGCCCA
GAAGAATTATATGTTATGCTGTTTCTCCAGGTCGTTAGACTACATCGGATTCTTTGA