Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g038740.3.1
CDS Infomation

3-hydroxy-3-methylglutaryl coenzyme A reductase (AHRD V3.3 *** K4B5W7_SOLLC)
Sequence

ATGGACGTTCGCCGGAGATCTGAAGAGCCTGTTTATCCATCTAAGGTCTTTGCCGCCGAT
GAAAAACCTCTCAAACCCCACAAGAAACAACAACAACAACAAGAGGACAAGAATACCCTT
CTCATTGATGCTTCCGATGCTCTCCCACTTCCTTTGTATCTCACGAATGGCTTGTTTTTC
ACCATGTTTTTCTCTGTTATGTATTTTCTTCTATCAAGGTGGCGTGAGAAAATCAGGAAT
TCCACTCCTTTACATGTCGTTACGCTTTCTGAATTGGGTGCTATTGTTTCGTTAATTGCT
TCTGTCATTTATCTTCTTGGTTTCTTTGGGATTGGGTTTGTTCAGACGTTTGTGTCAAGG
GGAAATAATGATTCATGGGATGAAAATGATGAGGAATTTCTATTGAAGGAAGATAGTCGT
TGTGGGCCTGCAACTACTCTTGGTTGTGCTGTTCCTGCACCACCTGCTCGACAAATTGCC
CCAATGGCACCACCTCAACCTTCTATGTCTATGGTAGAGAAACCTGCACCGTTGATAACA
TCAGCTTCGTCTGAGGAAGACGAAGAGATAATTAAATCCGTGGTGCAGGGGAAAATACCA
TCATACTCATTGGAATCCAAGCTCGGTGATTGTAAGCGCGCTGCTTCGATAAGGAAAGAG
GTGATGCAGAGGATTACAGGGAAGTCTCTAGAAGGGCTACCATTGGAAGGATTTAACTAT
GAATCTATTCTTGGGCAGTGTTGTGAGATGCCAATTGGGTACGTGCAGATACCAGTGGGA
ATAGCAGGGCCATTGTTGCTTAACGGAAAGGAGTTTTCAGTGCCCATGGCAACCACAGAA
GGATGTTTAGTGGCTAGCACCAATAGGGGTTGCAAGGCTATCTATGCTTCTGGTGGTGCT
ACATGCATTTTGCTTCGTGATGGGATGACCAGAGCACCATGTGTCAGGTTCGGCACAGCC
AAAAGGGCAGCAGAGTTGAAGTTCTTTGTTGAAGATCCCATAAAATTTGAGACACTTGCT
AACGTTTTCAACCAATCAAGCAGATTTGCCAGATTACAAAGAATTCAGTGTGCAATTGCG
GGAAAGAATCTTTACATGAGATTTGTATGTAGCACTGGTGATGCAATGGGAATGAACATG
GTGTCCAAAGGTGTACAAAATGTTCTTGATTACCTTCAGAATGAATATCCCGACATGGAT
GTCATCGGTATATCTGGGAACTTTTGCTCGGACAAGAAGCCAGCAGCAGTTAATTGGATC
GAGGGCAGAGGAAAGTCTGTAGTTTGTGAGGCAATTATCACAGAAGAGGTGGTGAAGAAA
GTTTTGAAAACTGAGGTTGCTGCTCTTGTGGAGCTGAACATGCTTAAAAATCTTACTGGC
TCTGCCATGGCTGGTGCCCTTGGAGGTTTCAATGCCCATGCCAGCAATATCGTCTCAGCT
GTGTTTATAGCCACAGGTCAGGATCCAGCTCAGAACATAGAGAGCTCGCACTGCATCACT
ATGATGGAGGCTGTAAATGATGGCAAGGACCTCCATATTTCTGTTACAATGCCTTCCATT
GAGGTTGGTACCGTTGGAGGTGGAACTCAGCTTGCATCTCAGTCAGCTTGCTTAAACTTG
TTAGGAGTGAAAGGTGCCAACAGAGAGGCACCAGGGTCAAATGCAAGGCTCTTGGCTACA
GTAGTAGCTGGTTCGGTTCTTGCTGGTGAACTATCCCTCATGTCAGCTATATCGTCTGGG
CAACTAGTTAATAGCCACATGAAATACAATAGATCTACCAAAGATGTCACCAAGGCGTCC
TCCTAA

Peptide Sequence

PEP ID

Solyc02g038740.3.1
PEP Infomation

3-hydroxy-3-methylglutaryl coenzyme A reductase (AHRD V3.3 *** K4B5W7_SOLLC)
Sequence

MDVRRRSEEPVYPSKVFAADEKPLKPHKKQQQQQEDKNTLLIDASDALPLPLYLTNGLFF
TMFFSVMYFLLSRWREKIRNSTPLHVVTLSELGAIVSLIASVIYLLGFFGIGFVQTFVSR
GNNDSWDENDEEFLLKEDSRCGPATTLGCAVPAPPARQIAPMAPPQPSMSMVEKPAPLIT
SASSEEDEEIIKSVVQGKIPSYSLESKLGDCKRAASIRKEVMQRITGKSLEGLPLEGFNY
ESILGQCCEMPIGYVQIPVGIAGPLLLNGKEFSVPMATTEGCLVASTNRGCKAIYASGGA
TCILLRDGMTRAPCVRFGTAKRAAELKFFVEDPIKFETLANVFNQSSRFARLQRIQCAIA
GKNLYMRFVCSTGDAMGMNMVSKGVQNVLDYLQNEYPDMDVIGISGNFCSDKKPAAVNWI
EGRGKSVVCEAIITEEVVKKVLKTEVAALVELNMLKNLTGSAMAGALGGFNAHASNIVSA
VFIATGQDPAQNIESSHCITMMEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNL
LGVKGANREAPGSNARLLATVVAGSVLAGELSLMSAISSGQLVNSHMKYNRSTKDVTKAS
S*

Transcript Sequence

Transcript ID

Solyc02g038740.3.1
Transcript Infomation

3-hydroxy-3-methylglutaryl coenzyme A reductase (AHRD V3.3 *** K4B5W7_SOLLC)
Sequence

CTCACATCCCATCACTCTTCTTTTAACAATTATACTTGTCAATCATCAATCCCACAAACA
ACACTTTTTCTCTCCTCTTTTTCCTCACCGGCGGCAGACTTACCGGTGAAAAAATGGACG
TTCGCCGGAGATCTGAAGAGCCTGTTTATCCATCTAAGGTCTTTGCCGCCGATGAAAAAC
CTCTCAAACCCCACAAGAAACAACAACAACAACAAGAGGACAAGAATACCCTTCTCATTG
ATGCTTCCGATGCTCTCCCACTTCCTTTGTATCTCACGAATGGCTTGTTTTTCACCATGT
TTTTCTCTGTTATGTATTTTCTTCTATCAAGGTGGCGTGAGAAAATCAGGAATTCCACTC
CTTTACATGTCGTTACGCTTTCTGAATTGGGTGCTATTGTTTCGTTAATTGCTTCTGTCA
TTTATCTTCTTGGTTTCTTTGGGATTGGGTTTGTTCAGACGTTTGTGTCAAGGGGAAATA
ATGATTCATGGGATGAAAATGATGAGGAATTTCTATTGAAGGAAGATAGTCGTTGTGGGC
CTGCAACTACTCTTGGTTGTGCTGTTCCTGCACCACCTGCTCGACAAATTGCCCCAATGG
CACCACCTCAACCTTCTATGTCTATGGTAGAGAAACCTGCACCGTTGATAACATCAGCTT
CGTCTGAGGAAGACGAAGAGATAATTAAATCCGTGGTGCAGGGGAAAATACCATCATACT
CATTGGAATCCAAGCTCGGTGATTGTAAGCGCGCTGCTTCGATAAGGAAAGAGGTGATGC
AGAGGATTACAGGGAAGTCTCTAGAAGGGCTACCATTGGAAGGATTTAACTATGAATCTA
TTCTTGGGCAGTGTTGTGAGATGCCAATTGGGTACGTGCAGATACCAGTGGGAATAGCAG
GGCCATTGTTGCTTAACGGAAAGGAGTTTTCAGTGCCCATGGCAACCACAGAAGGATGTT
TAGTGGCTAGCACCAATAGGGGTTGCAAGGCTATCTATGCTTCTGGTGGTGCTACATGCA
TTTTGCTTCGTGATGGGATGACCAGAGCACCATGTGTCAGGTTCGGCACAGCCAAAAGGG
CAGCAGAGTTGAAGTTCTTTGTTGAAGATCCCATAAAATTTGAGACACTTGCTAACGTTT
TCAACCAATCAAGCAGATTTGCCAGATTACAAAGAATTCAGTGTGCAATTGCGGGAAAGA
ATCTTTACATGAGATTTGTATGTAGCACTGGTGATGCAATGGGAATGAACATGGTGTCCA
AAGGTGTACAAAATGTTCTTGATTACCTTCAGAATGAATATCCCGACATGGATGTCATCG
GTATATCTGGGAACTTTTGCTCGGACAAGAAGCCAGCAGCAGTTAATTGGATCGAGGGCA
GAGGAAAGTCTGTAGTTTGTGAGGCAATTATCACAGAAGAGGTGGTGAAGAAAGTTTTGA
AAACTGAGGTTGCTGCTCTTGTGGAGCTGAACATGCTTAAAAATCTTACTGGCTCTGCCA
TGGCTGGTGCCCTTGGAGGTTTCAATGCCCATGCCAGCAATATCGTCTCAGCTGTGTTTA
TAGCCACAGGTCAGGATCCAGCTCAGAACATAGAGAGCTCGCACTGCATCACTATGATGG
AGGCTGTAAATGATGGCAAGGACCTCCATATTTCTGTTACAATGCCTTCCATTGAGGTTG
GTACCGTTGGAGGTGGAACTCAGCTTGCATCTCAGTCAGCTTGCTTAAACTTGTTAGGAG
TGAAAGGTGCCAACAGAGAGGCACCAGGGTCAAATGCAAGGCTCTTGGCTACAGTAGTAG
CTGGTTCGGTTCTTGCTGGTGAACTATCCCTCATGTCAGCTATATCGTCTGGGCAACTAG
TTAATAGCCACATGAAATACAATAGATCTACCAAAGATGTCACCAAGGCGTCCTCCTAAT
CAGGGGAATACAATACAATCCATTCCCGGCCTTGTATTTGAAGGTGTACACAGGTGATCC
CGCAAGTAGCCTCCATTTATGAATGATCTATATT