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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g037550.3.1
CDS Infomation

Auxin efflux carrier family protein (AHRD V3.3 *** AT1G76520.2)
Sequence

ATGGCATTTGTGGAGTTGTTTGTGGTGGCATTAATGCCTGTTCTTAAAACACTCATAATT
ACTGCTGTTGGTTTATTACTTGCTCTTGAACCTGTCAATCTTCTTGGCTCCACTGCAAGA
CACCATTTGAACAATCTTGTGTTTTATATATTTACTCCAGCGTTGGTGGCTAGCAGCTTG
GCTGAAACAGTAACATCGAGCAACATTGTTTCATTATGGTTCATGCCAGTAAATATCCTT
CTCACCTTTATTATTGGTTCAATACTTGGATGGATACTTGTGAAAATCACAAAAACTCCT
ATACATCTCCATGGCCTAGTTATTAGTTGTTGTTCTGCAGGGAATTTGGGGAACTTGCTT
CTCATCATAATACCAGCAGTATGTGAGGAGAAGAATAGTCCTTTTGGGGATTCAATTACA
TGCTCCACTAATGGAAAGGCCTATGCATCACTATCTATGGCGGTAGGAGCAGTGTATATT
TGGACATATATCTATAACATGATTCGAGCATCTGGAAGTCAACATAATAATGCCTCAACA
CATGTACCAAAATTACCTCCAGAGGAAATGGACCATCAATCTCAACTTGCACTGCCTCTC
ATTTCATATCAAACCATACATGAGCATCATCAGGGACATGTTGTGAAAAAGATGAAACAA
CATATCAAAATATGGACTCAGAGAATCAATTTCAAAATGTTATTTGCACCCTCAACAATT
GCTACGATTGTTGGGATCTTAATTGGTGTATCATCTTTGCTAAGAAATTTAATGATTGGA
AATGAGGCTCCATTGCATGTCATCGATAGCTCTGCATCTATGCTTGGAGAAGCTGCAATA
CCAGCCATGACATTGATCGTTGGAGCAAATCTTCTTAAAGGGCTGAAAAAGTCAGAAGTA
GGTGTGTGGATTGTGATAGGCATTCAAGTAATACGTTATATAGCATTGCCACTATCAGGA
ATTTGTGTTGTGAAAGTTGCACGCCATTTTGGGTTGGTTGGATCAGATTCATTATATCAG
TTTGTACTTCTTTTGCAATATGCACTTCCATCTGCCATGACCATAGGGACTATTACACAG
TTGTTTGAAGTTGGTGAAAGTGAATGTTCAGTAATTATGCTGTGGAATTATGCTCTGGCA
TCAGTTGCTCTTACTCTATGGACAACTTACTACATGTGGATTTTATCTTAA

Peptide Sequence

PEP ID

Solyc02g037550.3.1
PEP Infomation

Auxin efflux carrier family protein (AHRD V3.3 *** AT1G76520.2)
Sequence

MAFVELFVVALMPVLKTLIITAVGLLLALEPVNLLGSTARHHLNNLVFYIFTPALVASSL
AETVTSSNIVSLWFMPVNILLTFIIGSILGWILVKITKTPIHLHGLVISCCSAGNLGNLL
LIIIPAVCEEKNSPFGDSITCSTNGKAYASLSMAVGAVYIWTYIYNMIRASGSQHNNAST
HVPKLPPEEMDHQSQLALPLISYQTIHEHHQGHVVKKMKQHIKIWTQRINFKMLFAPSTI
ATIVGILIGVSSLLRNLMIGNEAPLHVIDSSASMLGEAAIPAMTLIVGANLLKGLKKSEV
GVWIVIGIQVIRYIALPLSGICVVKVARHFGLVGSDSLYQFVLLLQYALPSAMTIGTITQ
LFEVGESECSVIMLWNYALASVALTLWTTYYMWILS*

Transcript Sequence

Transcript ID

Solyc02g037550.3.1
Transcript Infomation

Auxin efflux carrier family protein (AHRD V3.3 *** AT1G76520.2)
Sequence

TTATATACTTTGATCAAAAAGAGAAAAAAAACTCTCTATATATTTATGCATTAAACTATT
ATAAAAATTGCTCAACTTAATTAATTGAGGATGGCATTTGTGGAGTTGTTTGTGGTGGCA
TTAATGCCTGTTCTTAAAACACTCATAATTACTGCTGTTGGTTTATTACTTGCTCTTGAA
CCTGTCAATCTTCTTGGCTCCACTGCAAGACACCATTTGAACAATCTTGTGTTTTATATA
TTTACTCCAGCGTTGGTGGCTAGCAGCTTGGCTGAAACAGTAACATCGAGCAACATTGTT
TCATTATGGTTCATGCCAGTAAATATCCTTCTCACCTTTATTATTGGTTCAATACTTGGA
TGGATACTTGTGAAAATCACAAAAACTCCTATACATCTCCATGGCCTAGTTATTAGTTGT
TGTTCTGCAGGGAATTTGGGGAACTTGCTTCTCATCATAATACCAGCAGTATGTGAGGAG
AAGAATAGTCCTTTTGGGGATTCAATTACATGCTCCACTAATGGAAAGGCCTATGCATCA
CTATCTATGGCGGTAGGAGCAGTGTATATTTGGACATATATCTATAACATGATTCGAGCA
TCTGGAAGTCAACATAATAATGCCTCAACACATGTACCAAAATTACCTCCAGAGGAAATG
GACCATCAATCTCAACTTGCACTGCCTCTCATTTCATATCAAACCATACATGAGCATCAT
CAGGGACATGTTGTGAAAAAGATGAAACAACATATCAAAATATGGACTCAGAGAATCAAT
TTCAAAATGTTATTTGCACCCTCAACAATTGCTACGATTGTTGGGATCTTAATTGGTGTA
TCATCTTTGCTAAGAAATTTAATGATTGGAAATGAGGCTCCATTGCATGTCATCGATAGC
TCTGCATCTATGCTTGGAGAAGCTGCAATACCAGCCATGACATTGATCGTTGGAGCAAAT
CTTCTTAAAGGGCTGAAAAAGTCAGAAGTAGGTGTGTGGATTGTGATAGGCATTCAAGTA
ATACGTTATATAGCATTGCCACTATCAGGAATTTGTGTTGTGAAAGTTGCACGCCATTTT
GGGTTGGTTGGATCAGATTCATTATATCAGTTTGTACTTCTTTTGCAATATGCACTTCCA
TCTGCCATGACCATAGGGACTATTACACAGTTGTTTGAAGTTGGTGAAAGTGAATGTTCA
GTAATTATGCTGTGGAATTATGCTCTGGCATCAGTTGCTCTTACTCTATGGACAACTTAC
TACATGTGGATTTTATCTTAACTTATTTGACAAAATAGACATAATTATTGTCCAATATTT
TTTATGATTTATAAAATAGGCACCAAATATATATACATATATAAACTAGCGCTGATAATT
CCGTTGGGCTGATGGGACAAATATGAATGAAGATCACAAGTAGAATATAAGGAACGTATT
C