Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g036460.3.1
CDS Infomation

OO_Ba0013J05-OO_Ba0033A15.14 protein (AHRD V3.3 *** D0ABF7_9ORYZ)
Sequence

ATGGGGAGTTGTTTGAGCAAGAAGAGCACTTGTTCTGTTTCTTCTCCTCCTCTTGCACTT
GTGAAACAAAATCAAGAAACCCTTGTAGAAAAGAAGAAAGTAGATGGACAGGTAGTGAGA
AGAGAAATCTTTGTTATCAAACACAGGGTAAGTCATGAAGAAGGCTCTAATAAACCAAAT
GAATCTTCTGCACCATCGAGGAGGACTTCGAGTTGTAACAAAGATGAAGTGGATACTATT
TTGATACAATGTGGGAGGCTTAGCAGAAGCTCATCTCCCAACAGACCTTTACCTTTTGAA
GCTAATACAAGTAGAAAGCACTCTTTTTCCAAGAAAAGTGACGGTGAGAATAGTACAAGG
GTGAGTAGATCTCCTGTTAGAAGATCTGAATCACCAATGAAAGCTAATTTGGCTTCTAGT
GATGCTAATGTTGGACCAGGAACGATGGTGTCTGTGCCTGCTACTGTTTCATCTCTTGTG
TTGGATAAGAATACTGACCTGATTTCTACAGCTCATATTCAGAGGATTCAAGTGAAGAGA
AATGTGGGTGTTGCATCTCCTCGTGCTCGGTCACGGTCAGTGTCTCCGGGGAAGATGAAT
TTGAAGGCGTCAACCGAGAACATGAATTTTCAACAACAGCCCTTGTACCTTAGCCGCAGC
AATTCCAGGAAAAGAGAGGATGATTCCCCTTTCAGAAGAAATTCTTCAAGTGAGATTGAT
AACCCTGTGGTCAATGAAACAATGCCCTTCTATATCCAGAAACTGAATGCAGAAAATATA
AACAATGGCAAAGTTGTTTTAAAAGGAACTGGGGAAAGCCTTAGCATCAGCAAAGTAGCT
CCAGATTATGGCCTTACAAATGTATATGCCAAATTCAAGAAGCAGCTGGCACAGGAAGCT
AAAGCATTGAGAACAGTTTCAGGGAATGCTGCAGTGGATATGGTTGCTTCAGGATCCGAG
AGCTTAGCGCCTGAGGTAATAAGAAGAAGCAGGTCACCGAGGCTATCCCGGGACATAGAC
ATTAATCATAGGGTTCAGTCAACTCTTACTCAATCATATACTGAGTTATTGCTTGAGGAC
ATACAAAACTTTCATCAAAAGAGCAGAAACCCTTCATTTTCACTTCCACCTGGTGCAGTT
GCTGACTTCAACTCAACTACTAGTTCCAACGTATCCAGTGCTTTCTCTGAAGACAGAAGA
AGCAACCGCACAGTCGAGCATTTTAACAAGATTACCAGTGCTTGTTTAGCAACCAATCCT
CAGAGTAGGTTAGCAATAAAGAACCCATATGCAGAGTCTGAGGTTGCCTTTAGTGATGAC
TCAATGGAGCCTTCCAGAATCCAGAAGTATGCAACATTTGGAAGGGGAACTGATGGTGGC
TCTATGGAAGAGCTAGAATCCTCAGAAAGCAATAGTTTTGTTGGTTATCAACGATGTAGG
TTTTCCTCGTCCTCACAAGAACCACATTCAGCTGATTCAACCGAATCTTGGACTCCAAAA
TCTTACAGTAGGCTGTATATGAATCCATTAGCCTTTCAAAAGTGTACAGTATCTGATCAT
GTTCCTGATATGGATGATGGTAAAAGTAGAATGACTGCAAATAAGAGGGATTCAGATAAC
CAGCAACATGGAATAGTTCACAACAGCAGTGAAGCTAGAGGACTTCACATATCACCTATG
GCAGCAGCAGCTGCTTTGACTTATTAG

Peptide Sequence

PEP ID

Solyc02g036460.3.1
PEP Infomation

OO_Ba0013J05-OO_Ba0033A15.14 protein (AHRD V3.3 *** D0ABF7_9ORYZ)
Sequence

MGSCLSKKSTCSVSSPPLALVKQNQETLVEKKKVDGQVVRREIFVIKHRVSHEEGSNKPN
ESSAPSRRTSSCNKDEVDTILIQCGRLSRSSSPNRPLPFEANTSRKHSFSKKSDGENSTR
VSRSPVRRSESPMKANLASSDANVGPGTMVSVPATVSSLVLDKNTDLISTAHIQRIQVKR
NVGVASPRARSRSVSPGKMNLKASTENMNFQQQPLYLSRSNSRKREDDSPFRRNSSSEID
NPVVNETMPFYIQKLNAENINNGKVVLKGTGESLSISKVAPDYGLTNVYAKFKKQLAQEA
KALRTVSGNAAVDMVASGSESLAPEVIRRSRSPRLSRDIDINHRVQSTLTQSYTELLLED
IQNFHQKSRNPSFSLPPGAVADFNSTTSSNVSSAFSEDRRSNRTVEHFNKITSACLATNP
QSRLAIKNPYAESEVAFSDDSMEPSRIQKYATFGRGTDGGSMEELESSESNSFVGYQRCR
FSSSSQEPHSADSTESWTPKSYSRLYMNPLAFQKCTVSDHVPDMDDGKSRMTANKRDSDN
QQHGIVHNSSEARGLHISPMAAAAALTY*

Transcript Sequence

Transcript ID

Solyc02g036460.3.1
Transcript Infomation

OO_Ba0013J05-OO_Ba0033A15.14 protein (AHRD V3.3 *** D0ABF7_9ORYZ)
Sequence

GGAAAGTAGTATGTAGAATAATCATGGTAGACATAGGTATCTTGGGTGGGACATATTCAC
AATCATAATTTTCTGCGATGTCCCTATATCTATGTCAAAAAAAAAATTGAATTGGAATTA
CCTGCTTCTCTCACATAACCCATTTTTTGTCTCTTTCTTCTTCCTTTTTCCCTCTCAAAC
CCTTACAAGACACCATTTTTTCTCCCAACTTGAAAACACACATTCATTCTTTATTTTTTT
GGGGTTTTAAAGAGAATGGGGAGTTGTTTGAGCAAGAAGAGCACTTGTTCTGTTTCTTCT
CCTCCTCTTGCACTTGTGAAACAAAATCAAGAAACCCTTGTAGAAAAGAAGAAAGTAGAT
GGACAGGTAGTGAGAAGAGAAATCTTTGTTATCAAACACAGGGTAAGTCATGAAGAAGGC
TCTAATAAACCAAATGAATCTTCTGCACCATCGAGGAGGACTTCGAGTTGTAACAAAGAT
GAAGTGGATACTATTTTGATACAATGTGGGAGGCTTAGCAGAAGCTCATCTCCCAACAGA
CCTTTACCTTTTGAAGCTAATACAAGTAGAAAGCACTCTTTTTCCAAGAAAAGTGACGGT
GAGAATAGTACAAGGGTGAGTAGATCTCCTGTTAGAAGATCTGAATCACCAATGAAAGCT
AATTTGGCTTCTAGTGATGCTAATGTTGGACCAGGAACGATGGTGTCTGTGCCTGCTACT
GTTTCATCTCTTGTGTTGGATAAGAATACTGACCTGATTTCTACAGCTCATATTCAGAGG
ATTCAAGTGAAGAGAAATGTGGGTGTTGCATCTCCTCGTGCTCGGTCACGGTCAGTGTCT
CCGGGGAAGATGAATTTGAAGGCGTCAACCGAGAACATGAATTTTCAACAACAGCCCTTG
TACCTTAGCCGCAGCAATTCCAGGAAAAGAGAGGATGATTCCCCTTTCAGAAGAAATTCT
TCAAGTGAGATTGATAACCCTGTGGTCAATGAAACAATGCCCTTCTATATCCAGAAACTG
AATGCAGAAAATATAAACAATGGCAAAGTTGTTTTAAAAGGAACTGGGGAAAGCCTTAGC
ATCAGCAAAGTAGCTCCAGATTATGGCCTTACAAATGTATATGCCAAATTCAAGAAGCAG
CTGGCACAGGAAGCTAAAGCATTGAGAACAGTTTCAGGGAATGCTGCAGTGGATATGGTT
GCTTCAGGATCCGAGAGCTTAGCGCCTGAGGTAATAAGAAGAAGCAGGTCACCGAGGCTA
TCCCGGGACATAGACATTAATCATAGGGTTCAGTCAACTCTTACTCAATCATATACTGAG
TTATTGCTTGAGGACATACAAAACTTTCATCAAAAGAGCAGAAACCCTTCATTTTCACTT
CCACCTGGTGCAGTTGCTGACTTCAACTCAACTACTAGTTCCAACGTATCCAGTGCTTTC
TCTGAAGACAGAAGAAGCAACCGCACAGTCGAGCATTTTAACAAGATTACCAGTGCTTGT
TTAGCAACCAATCCTCAGAGTAGGTTAGCAATAAAGAACCCATATGCAGAGTCTGAGGTT
GCCTTTAGTGATGACTCAATGGAGCCTTCCAGAATCCAGAAGTATGCAACATTTGGAAGG
GGAACTGATGGTGGCTCTATGGAAGAGCTAGAATCCTCAGAAAGCAATAGTTTTGTTGGT
TATCAACGATGTAGGTTTTCCTCGTCCTCACAAGAACCACATTCAGCTGATTCAACCGAA
TCTTGGACTCCAAAATCTTACAGTAGGCTGTATATGAATCCATTAGCCTTTCAAAAGTGT
ACAGTATCTGATCATGTTCCTGATATGGATGATGGTAAAAGTAGAATGACTGCAAATAAG
AGGGATTCAGATAACCAGCAACATGGAATAGTTCACAACAGCAGTGAAGCTAGAGGACTT
CACATATCACCTATGGCAGCAGCAGCTGCTTTGACTTATTAGATATATATGCAGTTTGTT
CGAGGATTGATATGTCGCTGTTTTGGTTGCTCACTTAGCAATTTTTTCATCTCAGTGTTT
ACAGTATCATTTACTTAAGTATTGTGTTGCAAATAATCTTTTAAGTTATCTAACAGACAT
ATGGTGGCTAATAATGGAGGTTTGCATTTATACAAATTTCAAACTTGGTACAAAGATATT
GAATAGGCACAGATATATATGTTAAACCTGATGCAGTGGTAGCATGAAAATTCTCTACAT
CTAATGTGATAATACACCTTCATGATTTATGGTACATGGCTGGACAGAAATCTACCTCCA
AGCAAGTTCCAGCCTGCATATTTACCTGTGTGTGTACTCTTGTAGGGCCTTACTATTATC
TTGAAATATTTTCTATACAGTGTACGTCTCTTCTGCAAATGGAGTAGAAAGCTGCTGAGC
TTTCTTCTCTATCCAGACATAAGGAGGGGAGATCAGTTGATTGACAGCTATATTATTTTG
TATCGCTTTTGTAATTAACCATGTAAATTGCAGCCACTGTGACAAATGCTCCAATTAGTT
GCACAGGTGTGAAGATCTCATCTAGATATAGGAACCTGTATTGGAGTTGAATAACTTAGG
TAGATTAAAAAGGTAAGAACGCGGAGAACAAAAAGTGAAGATAGAAACCAAATCAAATAT
ATTCTTGCTTTGAACAATAGTCCTAAATATTTTTTTCTTAGAAGCAGTTGCAAGTGATGA
CCAATTATTGATTGAGATTAAAATAACTTTCATCATCTTGTTCAGGAATTAATCTTTTGA
TAGGAATCTTACCCAAAAATTGATGCAAACATTGGAGTTAAAAAGGTAAGGGAGCTGAGC
TTTGTCAGGCTACCTGCAATGCTTAGTCTAGTCAATATTGGTTGTAACTGAAAAAAGTAA
GGCATAATGCAAAGTTGACAATCAGGGGACCTGAATCTATACCTCTTGTTGCATTGTAGA
AGTATACACCATAGCTTATGGCACTTCCAAAGATTGAGGTATAGAGCAATGCCAACAAGT
CATTTGTTGTTAGTTCCATCAAACTCCCACTAATGACAGGTTCATGATTGAGAATTGAGA
TAGCCACCAGAGGAAGTCCCCCAATAACCATGTGCTGTAAATTGTGGAGGTATCTGAAGT
TAGCACTGCAGTTTGGACATCAAAATTATAGTGCACTACTATTCTGTGGAACCATGTACT
TGAAGCATACTTAGTTTCCAGTCATGCTACCATTGATTTCAGTATCAGAAGTCAAGTAAT
ACGTAAAAAAGCCCATTGCTAACTTCTGTTTTTAATCTATAAAGTCAAGCAGCTGTAATT
GGGAACGTAGACCAATTTTATAGCTAACGTTTGACAGCACAACCACGATTTCTTAGTTAT
TCACTGTTTCAAACCTGATACATGATAAAATGAATTTCAATTCAGCAGTAAAGTAATATG
ACCTACCCATCCAGTAGCCATGACTGGGTCCGAGTATTTAGAAACCCAACGAACCATTAC
TGTGCCGACAGCCATGCTTTGTGCTGCTAGAAACATCCACCACTCTCCACTTCCCCAGAT
TGAAAAGTTGCTATTATCAAAAGAGAGAGCAGGTACCTGTCCAATTAACTCAGTTATTTC
AACGCTGTATTAGTTACTGACAAAAGG