Plant GARDEN How To ▶︎

JA

EN

Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g032850.3.1

CDS Infomation

Phytoalexin-deficient 4-1 protein (AHRD V3.3 *** Q2TNK3_SOLTU)

Sequence

ATGGTATCGGAAGCTTCATCGTTCGAGTCTAGTGAAACTTTAGCAGCTCTTGTGGCGTCA
ACGCCGTTGCTGGAGGAGTCATGGAAGGTTTGTGGTGTCGCCGATGCATCGGTGGGTTGC
AATTTCGCCGTCAATCGAGTTGGTGAGACAGCTTATGTGGGATTCTCCGGCGTGAAATTG
GGCGCCGGAGTGGACCAAAGTTGCCGGAATTTAGTGCCGCTTCCGGATGAACTTTTCTTT
TCGTTATGCGTGGATGGACCGGATCCGGCAATGGTCCATGCCGGATTATTGCATCTTTTT
CAATCAGTTTACATAGACAATTTATTCCGTGATCAGATGGTAGAAATAATGAACACAAGC
AAGTCAATAGTCATAACAGGACACTCAATTGGAGGAGCAATTGCATCCCTCTTAACTCTC
TGGCTTCTCTGCCGCCTGCAAACTATTTGCTCTGTCATTTGCATAACATTTGGCTCTCCA
ATGCTTGGCAATCAGTCCTTCTCCAGAGCCATTCTTCAAAAGAGATGGGCTGGACATTTT
TGTCATGTTGTTTCACAGCATGATATTGTCCCAAGACTGTTCTTTGCCCCATCATGTTGT
TTCCAGTTTATTTCTTATGAAAACAAGACTCAGCTCTTCCACGTTGTGTTGGATTCTCTT
GGAGTTGTGTCAAGAGGTGAATGTAAGAGTTCATTTTGTCCCTCTGGGAGCTACTTGTTC
TGCACCAACAAGGGTGCAGTTTGTGTCGATAATGGGATGGTTGTCATTAAGTTGCTTTAC
TTCACGTTACTGAATAGTTCACAAAGTTCTAGCCTTGAGGATCATCTTGATTATGCTGAT
TTCATTCAGAAAGTTCAGTGGCAATTTATAGAGAATAGAAGCTTCACGGAAGGCAGTATA
CCCAAGTCAAGCTATAAAGCAGGGATAACATTGGCACTGGAGTCACTAGGAATAGCTTCT
CATGAAGTGAATTTCGAAGATGCTAAGGAAGCCCTGAAGAAGGCAAAAAAGTTGGGTCGA
ACTCGCAACCTCAACAGCGCCAACCTTGCAATTGGTTTATCTAAAATCAATCCATTCAGA
GCACAGATAGAGTGGTTTAAAGCATCTTGTGACAATTCTGCTGAACAAATGGGATATTAC
GATTCATTCAAGCAAAGAGGTGCCTCGAAAAGAGGCTTTAAGGTCAATATGAACAGGATC
AAACTTGCTCAGTTTTGGGATTCTTTGATTGACAAGTTGGAAGCTAATGAACTGCCCTAT
GATTTTCACAAACGTGCAAAGTGGGTAAATGCTTCTCAGTTCTACAAACTCGTCGTCGAG
CCACTTGATATTGCAGAGTACTACAGGACTGGGATGCATCTTGTGAAAGGCCACTACATG
CAGCATGGAAGGGAACGAAGATACAAGATTTTCGATAAGTGGTGGAAAACTGAGAATGAC
ACTGATAATCCTACTGCAAGGAGCCGGTTTGCGAGTTCTACACAAGATTCATGCTTTTGG
GCTCGCGTTGAGGAGGCAAGAGACAGTCTTATTAAGGTGAGAGCTGAGGGTGATGCAAGA
AAGTTTCTCAAGATGTTGGAAGATGTCACAAAGTTTGATCAATATGCTAAAAGATTGATA
GAAAATAAGGAGATTTCGCAGGATGTTTTGGCCAAAAACTCAAGCTACACTAAGTTTATA
GAGGAATGGAAGGACTTGCAGTCTCAGTTACAGCTGCTCCAACCTCAGTTTCCTTGA

Peptide Sequence

PEP ID

Solyc02g032850.3.1

PEP Infomation

Phytoalexin-deficient 4-1 protein (AHRD V3.3 *** Q2TNK3_SOLTU)

Sequence

MVSEASSFESSETLAALVASTPLLEESWKVCGVADASVGCNFAVNRVGETAYVGFSGVKL
GAGVDQSCRNLVPLPDELFFSLCVDGPDPAMVHAGLLHLFQSVYIDNLFRDQMVEIMNTS
KSIVITGHSIGGAIASLLTLWLLCRLQTICSVICITFGSPMLGNQSFSRAILQKRWAGHF
CHVVSQHDIVPRLFFAPSCCFQFISYENKTQLFHVVLDSLGVVSRGECKSSFCPSGSYLF
CTNKGAVCVDNGMVVIKLLYFTLLNSSQSSSLEDHLDYADFIQKVQWQFIENRSFTEGSI
PKSSYKAGITLALESLGIASHEVNFEDAKEALKKAKKLGRTRNLNSANLAIGLSKINPFR
AQIEWFKASCDNSAEQMGYYDSFKQRGASKRGFKVNMNRIKLAQFWDSLIDKLEANELPY
DFHKRAKWVNASQFYKLVVEPLDIAEYYRTGMHLVKGHYMQHGRERRYKIFDKWWKTEND
TDNPTARSRFASSTQDSCFWARVEEARDSLIKVRAEGDARKFLKMLEDVTKFDQYAKRLI
ENKEISQDVLAKNSSYTKFIEEWKDLQSQLQLLQPQFP*

Transcript Sequence

Transcript ID

Solyc02g032850.3.1

Transcript Infomation

Phytoalexin-deficient 4-1 protein (AHRD V3.3 *** Q2TNK3_SOLTU)

Sequence

GAATACTATTTTAAATATATACTTTTTTCCCCCAAATCTTTTCAATTAGCAAAACACTTT
TTTTCTCACAAAAACATTGAAAATTATGGTATCGGAAGCTTCATCGTTCGAGTCTAGTGA
AACTTTAGCAGCTCTTGTGGCGTCAACGCCGTTGCTGGAGGAGTCATGGAAGGTTTGTGG
TGTCGCCGATGCATCGGTGGGTTGCAATTTCGCCGTCAATCGAGTTGGTGAGACAGCTTA
TGTGGGATTCTCCGGCGTGAAATTGGGCGCCGGAGTGGACCAAAGTTGCCGGAATTTAGT
GCCGCTTCCGGATGAACTTTTCTTTTCGTTATGCGTGGATGGACCGGATCCGGCAATGGT
CCATGCCGGATTATTGCATCTTTTTCAATCAGTTTACATAGACAATTTATTCCGTGATCA
GATGGTAGAAATAATGAACACAAGCAAGTCAATAGTCATAACAGGACACTCAATTGGAGG
AGCAATTGCATCCCTCTTAACTCTCTGGCTTCTCTGCCGCCTGCAAACTATTTGCTCTGT
CATTTGCATAACATTTGGCTCTCCAATGCTTGGCAATCAGTCCTTCTCCAGAGCCATTCT
TCAAAAGAGATGGGCTGGACATTTTTGTCATGTTGTTTCACAGCATGATATTGTCCCAAG
ACTGTTCTTTGCCCCATCATGTTGTTTCCAGTTTATTTCTTATGAAAACAAGACTCAGCT
CTTCCACGTTGTGTTGGATTCTCTTGGAGTTGTGTCAAGAGGTGAATGTAAGAGTTCATT
TTGTCCCTCTGGGAGCTACTTGTTCTGCACCAACAAGGGTGCAGTTTGTGTCGATAATGG
GATGGTTGTCATTAAGTTGCTTTACTTCACGTTACTGAATAGTTCACAAAGTTCTAGCCT
TGAGGATCATCTTGATTATGCTGATTTCATTCAGAAAGTTCAGTGGCAATTTATAGAGAA
TAGAAGCTTCACGGAAGGCAGTATACCCAAGTCAAGCTATAAAGCAGGGATAACATTGGC
ACTGGAGTCACTAGGAATAGCTTCTCATGAAGTGAATTTCGAAGATGCTAAGGAAGCCCT
GAAGAAGGCAAAAAAGTTGGGTCGAACTCGCAACCTCAACAGCGCCAACCTTGCAATTGG
TTTATCTAAAATCAATCCATTCAGAGCACAGATAGAGTGGTTTAAAGCATCTTGTGACAA
TTCTGCTGAACAAATGGGATATTACGATTCATTCAAGCAAAGAGGTGCCTCGAAAAGAGG
CTTTAAGGTCAATATGAACAGGATCAAACTTGCTCAGTTTTGGGATTCTTTGATTGACAA
GTTGGAAGCTAATGAACTGCCCTATGATTTTCACAAACGTGCAAAGTGGGTAAATGCTTC
TCAGTTCTACAAACTCGTCGTCGAGCCACTTGATATTGCAGAGTACTACAGGACTGGGAT
GCATCTTGTGAAAGGCCACTACATGCAGCATGGAAGGGAACGAAGATACAAGATTTTCGA
TAAGTGGTGGAAAACTGAGAATGACACTGATAATCCTACTGCAAGGAGCCGGTTTGCGAG
TTCTACACAAGATTCATGCTTTTGGGCTCGCGTTGAGGAGGCAAGAGACAGTCTTATTAA
GGTGAGAGCTGAGGGTGATGCAAGAAAGTTTCTCAAGATGTTGGAAGATGTCACAAAGTT
TGATCAATATGCTAAAAGATTGATAGAAAATAAGGAGATTTCGCAGGATGTTTTGGCCAA
AAACTCAAGCTACACTAAGTTTATAGAGGAATGGAAGGACTTGCAGTCTCAGTTACAGCT
GCTCCAACCTCAGTTTCCTTGAATTCTTAAAGGTAGAAAATAGCTTGAGGATTGTTGGTC
TAGTTAGGGCATCAATCTCTATATATAGCAATAAAGAAGCTCAACTAAAACATCTGTCAT
TTTTCCTCAAGAAGAACATATAATATTATAATTAGATGCTCTACTCCAAGAGAAATTCTA
GAGGAACTAGAACTTGTATATTTCAAGAGTGTTCATTGAGCTATAAATTGTGAAAACAAA
ACGGTATACATGCTGCCAAGGTTTGTATACATCTCTCAGAGTGAACTTATATAATATTTA
TGTAGCAATATCATGCAACAGGAGGAGCTAAAGTAGTCAAATAACCCAAAAGGCAAGTGC
CGCAACGGTTTATGTTAA