Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g030170.3.1
CDS Infomation

DWARF1/DIMINUTO
Sequence

ATGACAGTTTACCTACTTCCTGAAGCACGTGGAGATGGGAATCTATTAGTTGAATTTGGG
CCACAATTTCTAATGATTGAGATAATTTACTTGTGTTTAGTTGAAAAGGGTGGGTTAGAT
CTAATTATGATGAATAATTTAGAAGTTCTGTTTGGCCTCTCTTGTTTCAAAATGACAGAT
GTTCAGGCTCCCCCCCCTCGTCCTAAGAGGAAGAAAAACATTATGGACCTTCTTGTCCAG
TTCAGATGGATTGTTGTTATCTTCGTCGTCCTTCCTCTCTCGTTCTTGTATTATTTCTCC
ATATATCTTGGGGATGTTAGGTCTGAGTGCAAATCATACAAGCAGCGCCAGAAGGAGCAT
GATGAAAATGTTAAAAAGGTTGTGAAGCGTCTTAAGGAGAGGAATGCATCTAAGGATGGT
CTTGTCTGCACAGCTAGGAAGCCCTGGGTTGCTGTTGGAATGAGAAATGTGGACTACAAG
CGTGCTCGTCATTTTGAAGTTGATCTTTCTCCATTTAGAAATGTTCTTAACATTGACACG
GAGCGAATGATTGCTAAAGTCGAGCCTCTAGTCAATATGGGACAAATCTCTAGAGTTACT
GTCCCTCTGAATGTTTCCCTTGCAGTTGTTGCTGAGCTTGATGATCTAACTGTTGGTGGT
CTGATCAACGGCTATGGGATTGAAGGAAGTTCTCACATTTATGGACTGTTCTCAGACACT
GTTGTGTCTTATGAAGTTGTTCTAGCAGATGGGCAGGTAGTTAGAGCTACAAAGGACAAT
GAATATTCTGATCTTTTCTATGCTATTCCATGGTCTCAAGGGACTCTAGGGCTTCTGGTT
TCAGCTGAGATCAAGCTCATTCCGATCAAGGAATACATGAAACTTACCTACAAACCTGTA
GTTGGTAATTTGAAAGAGATTGCTCAGGCTTATATGGATTCTTTTTCACCTAGAGACGGG
GATCAGGATAACCATGAGAAAGTTCCAGACTTTGTTGAAACCATGGTGTATACTCCCACA
GAAGCTGTTTGCATGACTGGTAGATATGCTTCAAAAGAAGAGGCCAAGAAGAAGGGCAAT
GTGATCAACAATGTTGGTTGGTGGTTCAAAACCTGGTTTTACCAGCACGCTCAAACTGCA
CTCAAGAAGGGAGAATTCGTAGAGTACATCCCAACTAGGGAATACTACCACAGGCACACA
AGATGCTTGTATTGGGAAGGGAAACTTATCCTTCCATTTGGTGATCAATGGTGGTTTAGG
TTTCTCTTTGGATGGGCCATGCCTCCCAAGGTTTCTCTACTTAAAGCCACTCAAGGTGAA
TACATTAGGAACTATTACCATGAAAACCATGTCATTCAGGATATGCTTGTTCCTCTCTAC
AAGGTTGGTGATGCTCTTGAGTGGGTCCACCGTGAGATGGAGGTGTATCCCCTCTGGCTC
TGCCCCCACAGACTCTACAGGCTGCCTCTTAAAACAATGGTGTATCCTGAACCAGGTTTT
GAGCTGCAGAAGAGGCAGGGTGACACAAAATATGCTCAAATGTACACTGATGTTGGTGTC
TACTATGCTCCTGGACCTATTTTGAGGGGTGAGGTCTTTGATGGTATAGAGGCAGTCCGT
AAGTTGGAGAGTTGGTTGATTGAGAACCATGGATTCCAGCCACAGTATGCTGTCTCTGAG
CTGACGGAGAAGAACTTCTGGAGAATGTTTGATGGAAGCCTATATGAGAACTGCAGGAAA
AAGTATAGAGCCATCGGAACCTTCATGAGTGTGTACTATAAGTCTAAGAAAGGAAAGAAG
ACAGAGAAGGAGGTGCAGGAAGCTGAGCAAGAGACTGCTGAAGTTGAGACCCCAGAAGTT
GATGAGCCTGAAGATTGA

Peptide Sequence

PEP ID

Solyc02g030170.3.1
PEP Infomation

DWARF1/DIMINUTO
Sequence

MTVYLLPEARGDGNLLVEFGPQFLMIEIIYLCLVEKGGLDLIMMNNLEVLFGLSCFKMTD
VQAPPPRPKRKKNIMDLLVQFRWIVVIFVVLPLSFLYYFSIYLGDVRSECKSYKQRQKEH
DENVKKVVKRLKERNASKDGLVCTARKPWVAVGMRNVDYKRARHFEVDLSPFRNVLNIDT
ERMIAKVEPLVNMGQISRVTVPLNVSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDT
VVSYEVVLADGQVVRATKDNEYSDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLTYKPV
VGNLKEIAQAYMDSFSPRDGDQDNHEKVPDFVETMVYTPTEAVCMTGRYASKEEAKKKGN
VINNVGWWFKTWFYQHAQTALKKGEFVEYIPTREYYHRHTRCLYWEGKLILPFGDQWWFR
FLFGWAMPPKVSLLKATQGEYIRNYYHENHVIQDMLVPLYKVGDALEWVHREMEVYPLWL
CPHRLYRLPLKTMVYPEPGFELQKRQGDTKYAQMYTDVGVYYAPGPILRGEVFDGIEAVR
KLESWLIENHGFQPQYAVSELTEKNFWRMFDGSLYENCRKKYRAIGTFMSVYYKSKKGKK
TEKEVQEAEQETAEVETPEVDEPED*

Transcript Sequence

Transcript ID

Solyc02g030170.3.1
Transcript Infomation

DWARF1/DIMINUTO
Sequence

ATGACAGTTTACCTACTTCCTGAAGCACGTGGAGATGGGAATCTATTAGTTGAATTTGGG
CCACAATTTCTAATGATTGAGATAATTTACTTGTGTTTAGTTGAAAAGGGTGGGTTAGAT
CTAATTATGATGAATAATTTAGAAGTTCTGTTTGGCCTCTCTTGTTTCAAAATGACAGAT
GTTCAGGCTCCCCCCCCTCGTCCTAAGAGGAAGAAAAACATTATGGACCTTCTTGTCCAG
TTCAGATGGATTGTTGTTATCTTCGTCGTCCTTCCTCTCTCGTTCTTGTATTATTTCTCC
ATATATCTTGGGGATGTTAGGTCTGAGTGCAAATCATACAAGCAGCGCCAGAAGGAGCAT
GATGAAAATGTTAAAAAGGTTGTGAAGCGTCTTAAGGAGAGGAATGCATCTAAGGATGGT
CTTGTCTGCACAGCTAGGAAGCCCTGGGTTGCTGTTGGAATGAGAAATGTGGACTACAAG
CGTGCTCGTCATTTTGAAGTTGATCTTTCTCCATTTAGAAATGTTCTTAACATTGACACG
GAGCGAATGATTGCTAAAGTCGAGCCTCTAGTCAATATGGGACAAATCTCTAGAGTTACT
GTCCCTCTGAATGTTTCCCTTGCAGTTGTTGCTGAGCTTGATGATCTAACTGTTGGTGGT
CTGATCAACGGCTATGGGATTGAAGGAAGTTCTCACATTTATGGACTGTTCTCAGACACT
GTTGTGTCTTATGAAGTTGTTCTAGCAGATGGGCAGGTAGTTAGAGCTACAAAGGACAAT
GAATATTCTGATCTTTTCTATGCTATTCCATGGTCTCAAGGGACTCTAGGGCTTCTGGTT
TCAGCTGAGATCAAGCTCATTCCGATCAAGGAATACATGAAACTTACCTACAAACCTGTA
GTTGGTAATTTGAAAGAGATTGCTCAGGCTTATATGGATTCTTTTTCACCTAGAGACGGG
GATCAGGATAACCATGAGAAAGTTCCAGACTTTGTTGAAACCATGGTGTATACTCCCACA
GAAGCTGTTTGCATGACTGGTAGATATGCTTCAAAAGAAGAGGCCAAGAAGAAGGGCAAT
GTGATCAACAATGTTGGTTGGTGGTTCAAAACCTGGTTTTACCAGCACGCTCAAACTGCA
CTCAAGAAGGGAGAATTCGTAGAGTACATCCCAACTAGGGAATACTACCACAGGCACACA
AGATGCTTGTATTGGGAAGGGAAACTTATCCTTCCATTTGGTGATCAATGGTGGTTTAGG
TTTCTCTTTGGATGGGCCATGCCTCCCAAGGTTTCTCTACTTAAAGCCACTCAAGGTGAA
TACATTAGGAACTATTACCATGAAAACCATGTCATTCAGGATATGCTTGTTCCTCTCTAC
AAGGTTGGTGATGCTCTTGAGTGGGTCCACCGTGAGATGGAGGTGTATCCCCTCTGGCTC
TGCCCCCACAGACTCTACAGGCTGCCTCTTAAAACAATGGTGTATCCTGAACCAGGTTTT
GAGCTGCAGAAGAGGCAGGGTGACACAAAATATGCTCAAATGTACACTGATGTTGGTGTC
TACTATGCTCCTGGACCTATTTTGAGGGGTGAGGTCTTTGATGGTATAGAGGCAGTCCGT
AAGTTGGAGAGTTGGTTGATTGAGAACCATGGATTCCAGCCACAGTATGCTGTCTCTGAG
CTGACGGAGAAGAACTTCTGGAGAATGTTTGATGGAAGCCTATATGAGAACTGCAGGAAA
AAGTATAGAGCCATCGGAACCTTCATGAGTGTGTACTATAAGTCTAAGAAAGGAAAGAAG
ACAGAGAAGGAGGTGCAGGAAGCTGAGCAAGAGACTGCTGAAGTTGAGACCCCAGAAGTT
GATGAGCCTGAAGATTGATCGTGTTCTCATGGCTTTTCTGCCTTTTCTCATTTATTTAGT
TGTGATTGTGTGGATGCTCTTAGTTTCCTTGGTCTGTTTGTCATTGCATCTTTTTGAACA
TTTTCTAGCCTTGAGCTTGTTTATTTCCTTTTAACCAGCTGGACTGGACTGGCTTAGTTC
AATGTGTTTTTTTTTTGGCTTCACCCACCTCCTTTCCAAAATCATATCAAATGTCAGCCT
GC