Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g030080.3.1
CDS Infomation

transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** AT5G11240.1)
Sequence

ATGGGCACAGCTAATATAAGGGACATTTTGACTTGTTTTAGTCCTTCGTTAGACTTCTTT
GCTATAAGTTCTGGTGATGGCCGTATCAAGATATGGGATACTGTGAAGGGTCAGGTACAG
ACCGAGTTTGCAGATATTGTGTCAATGGAGAAAGAAAGCTCGTTTAATAAGCCAGGAGGT
CATCTTTCAATGGATTATACTTGCATGAAGTGGTTATCATGTGACAGAAAGAAAAAAAGG
AAGATTGGAACTTCATTATTGGTGTTAGGTACAGGAAGTGGTGATTTTTTGGCTCTAGAT
GTATCTGCAGGTCATCTGAAATGGAGATTTAGTGATTGCCATCCTGGCGGTGTCAACGCC
ATCTCATTCCCTTCACATGGTTCATTCATTTACACGGCTGGTGCTGATGGACTAGTTTGC
AAAATTGACTCCATGTCCGGAAATTTACTGCATAAGTTTAAAGCTTCCACTAAAGCAATA
TCATCTTTATCCATTTCATCAGATGGGAAAATATTAGCAACAGCAACTTCTCAGTTGAAG
GTTTTCAATTGCTTGGATGACAAAAAGCTCCAGAAATTTACAGGCCATCCTGGGGCTGTC
CGGTGTATGGTTTTCTCTGAAGATGGGAGACATGTTCTTTCTTCTGCTGTTGGTGACCGA
CATGTAGCAGTTTGGAAGTTAGATGGTAGCAAAAAGAAATCAGCATGCTGCTCGCTGGCA
ATGGATCACCCTGCTGTCTTCTTGGATAGCTACAACATTAAATCTGGAGCTGCAAATGAT
GCAGGCTTGGGTGTTTTGGCCATTTCAGAAATTGGTGTTTGCTACTTTTGGCATGGAAAG
AGCTTTGAGGAACTGCACAATGGGAAGCCCACAAAGATATTTGCATCTTTAGATGAGAAA
ATAATGAAGAAACATAAAGAAACCATGCATAGTATTTTTTCAGCAAAATTGCAATCTATT
GGCACATCTGGTTCTGGCCATATGTTTGTTGCATATGGCTTGCTTATAAAACCATCATTT
GAAAAAGTTATGGTGCAGCCTGGGGAGGATATCAGATTAAAAAGTTCACTTGACGGGATC
CTTCTACCCTTCAGTCAATCTCGCAAATCTAAACAAGCATCCAAGACCCAGAGTCAGGTT
ACTGCTCTCGATCGTGCAAATGCAGAGGGTGCATTACTTCCTTTGCCCATGATTCTTGAT
CAGGTTGGCGTGGAGACTGGAATTAAGCCCACAGTTAGCAAAGATGTCATTGGTACACAA
GCAGAAGATGAGGTCACAATTTGCATGGAGGACCAGTTAAGATCCTTGGGTATAATTAGC
AGCGACAATGATCTCTTGCCTCCCTCAATTCTTGATGCCAAGATTTTGAAAAGAATAAGT
GCTGATGCTAGTGTGCCACAAAAGAAGATGAAAGCCGCTGTTTTATCCATGGAACCACAT
GATGCTTACAACTTTTTGAAAGCCTTGGTGGCTGCATGGCAGTCCAGATCAAGCTTGGGA
ACACATGTTCTTCCATGGATATGCTGTATATTGGTGAACCACAATGAATTTGTTACATCG
CAGGAACCACTGACGCCTCTTCTAGATTCGATGAACAAGCTTACCAAGTCAAAGGGAGTA
GCCCTTAACTCATTATTGCAGTTATCTGGCCGTTTGCAACTCGTAATGGCACAGATTGGG
AAGGCTGATAATAAGAAAAGTCCGACATCAACACTCGAGGGGCAGATGAATGATAGTGAG
GATGATGAGGTAGATGAAGTTATGTATGGCATAGATGAATCTCAAACGAGTAGTGACGGG
GATGACTAG

Peptide Sequence

PEP ID

Solyc02g030080.3.1
PEP Infomation

transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** AT5G11240.1)
Sequence

MGTANIRDILTCFSPSLDFFAISSGDGRIKIWDTVKGQVQTEFADIVSMEKESSFNKPGG
HLSMDYTCMKWLSCDRKKKRKIGTSLLVLGTGSGDFLALDVSAGHLKWRFSDCHPGGVNA
ISFPSHGSFIYTAGADGLVCKIDSMSGNLLHKFKASTKAISSLSISSDGKILATATSQLK
VFNCLDDKKLQKFTGHPGAVRCMVFSEDGRHVLSSAVGDRHVAVWKLDGSKKKSACCSLA
MDHPAVFLDSYNIKSGAANDAGLGVLAISEIGVCYFWHGKSFEELHNGKPTKIFASLDEK
IMKKHKETMHSIFSAKLQSIGTSGSGHMFVAYGLLIKPSFEKVMVQPGEDIRLKSSLDGI
LLPFSQSRKSKQASKTQSQVTALDRANAEGALLPLPMILDQVGVETGIKPTVSKDVIGTQ
AEDEVTICMEDQLRSLGIISSDNDLLPPSILDAKILKRISADASVPQKKMKAAVLSMEPH
DAYNFLKALVAAWQSRSSLGTHVLPWICCILVNHNEFVTSQEPLTPLLDSMNKLTKSKGV
ALNSLLQLSGRLQLVMAQIGKADNKKSPTSTLEGQMNDSEDDEVDEVMYGIDESQTSSDG
DD*

Transcript Sequence

Transcript ID

Solyc02g030080.3.1
Transcript Infomation

transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** AT5G11240.1)
Sequence

GAGCAAAACCCCAAAATTTTGAAGGTTTAGCCTTCTCTTTAAGCCGCCCTGCTCCTTTGC
CATTATTTCCCTTTTTTCAGCGCCACCGTCTGTTCAGCAGCTCTACCTTCTCCCTCGCCG
GAAGCTCCAGTTTTCCACCGTCCGTTGAGAAGCTCTACCTTCTACGTCGCCCGAAGCTCC
AGTTTGTACTCGAAGTTCCGTTACAAGCAATGGGCACAGCTAATATAAGGGACATTTTGA
CTTGTTTTAGTCCTTCGTTAGACTTCTTTGCTATAAGTTCTGGTGATGGCCGTATCAAGA
TATGGGATACTGTGAAGGGTCAGGTACAGACCGAGTTTGCAGATATTGTGTCAATGGAGA
AAGAAAGCTCGTTTAATAAGCCAGGAGGTCATCTTTCAATGGATTATACTTGCATGAAGT
GGTTATCATGTGACAGAAAGAAAAAAAGGAAGATTGGAACTTCATTATTGGTGTTAGGTA
CAGGAAGTGGTGATTTTTTGGCTCTAGATGTATCTGCAGGTCATCTGAAATGGAGATTTA
GTGATTGCCATCCTGGCGGTGTCAACGCCATCTCATTCCCTTCACATGGTTCATTCATTT
ACACGGCTGGTGCTGATGGACTAGTTTGCAAAATTGACTCCATGTCCGGAAATTTACTGC
ATAAGTTTAAAGCTTCCACTAAAGCAATATCATCTTTATCCATTTCATCAGATGGGAAAA
TATTAGCAACAGCAACTTCTCAGTTGAAGGTTTTCAATTGCTTGGATGACAAAAAGCTCC
AGAAATTTACAGGCCATCCTGGGGCTGTCCGGTGTATGGTTTTCTCTGAAGATGGGAGAC
ATGTTCTTTCTTCTGCTGTTGGTGACCGACATGTAGCAGTTTGGAAGTTAGATGGTAGCA
AAAAGAAATCAGCATGCTGCTCGCTGGCAATGGATCACCCTGCTGTCTTCTTGGATAGCT
ACAACATTAAATCTGGAGCTGCAAATGATGCAGGCTTGGGTGTTTTGGCCATTTCAGAAA
TTGGTGTTTGCTACTTTTGGCATGGAAAGAGCTTTGAGGAACTGCACAATGGGAAGCCCA
CAAAGATATTTGCATCTTTAGATGAGAAAATAATGAAGAAACATAAAGAAACCATGCATA
GTATTTTTTCAGCAAAATTGCAATCTATTGGCACATCTGGTTCTGGCCATATGTTTGTTG
CATATGGCTTGCTTATAAAACCATCATTTGAAAAAGTTATGGTGCAGCCTGGGGAGGATA
TCAGATTAAAAAGTTCACTTGACGGGATCCTTCTACCCTTCAGTCAATCTCGCAAATCTA
AACAAGCATCCAAGACCCAGAGTCAGGTTACTGCTCTCGATCGTGCAAATGCAGAGGGTG
CATTACTTCCTTTGCCCATGATTCTTGATCAGGTTGGCGTGGAGACTGGAATTAAGCCCA
CAGTTAGCAAAGATGTCATTGGTACACAAGCAGAAGATGAGGTCACAATTTGCATGGAGG
ACCAGTTAAGATCCTTGGGTATAATTAGCAGCGACAATGATCTCTTGCCTCCCTCAATTC
TTGATGCCAAGATTTTGAAAAGAATAAGTGCTGATGCTAGTGTGCCACAAAAGAAGATGA
AAGCCGCTGTTTTATCCATGGAACCACATGATGCTTACAACTTTTTGAAAGCCTTGGTGG
CTGCATGGCAGTCCAGATCAAGCTTGGGAACACATGTTCTTCCATGGATATGCTGTATAT
TGGTGAACCACAATGAATTTGTTACATCGCAGGAACCACTGACGCCTCTTCTAGATTCGA
TGAACAAGCTTACCAAGTCAAAGGGAGTAGCCCTTAACTCATTATTGCAGTTATCTGGCC
GTTTGCAACTCGTAATGGCACAGATTGGGAAGGCTGATAATAAGAAAAGTCCGACATCAA
CACTCGAGGGGCAGATGAATGATAGTGAGGATGATGAGGTAGATGAAGTTATGTATGGCA
TAGATGAATCTCAAACGAGTAGTGACGGGGATGACTAGGACTTTTTCAGTGAGAGACGTT
TCATAAAGCTGAAAGTTGATTGGCAGGTGCTTTAAACAAGGGAATCTATATGGTCAGTTT
TGGTAGGAGGCTGGGCCTTGGGGCCTTAAATGGCTAGTGCAAGGAGATATAATTTAGGTT
GCTCTATCTAGTTTGTTATGGGTGTAGGGATAAATCCTATGTACTCTCTTTCCTAGACCC
CTTCCTGATTGTATGCATTAAGTCGATAATCTGTTGTGTGAGGTTCTTCATAGATGCCAT
TTATCTGATCTTTCATTGGTTTTGCTGTTAAAAGTCTCCTTAACTTGCTTCATCCATTGC
ACTGAACTTGTAAGCTAGGAAGAGAATGTAACAATTGGTGAAATGGGGACCCAGCAAGCT
ATTTGATCCGGTAGTTTCTTTGTGCGTGTGTGTGTGGGAATGAGTTGTATTTTGATCCCC
TAAGAAGTTACGCACAAAATGGACTCTTGTTTTTGAGTTATCTTACAGTGGCGGTGGTGC
AACCAGACTCATTGTTCCAAGTCTCTTGCTTTGAGTGTTTTGTTTGTGCTGTGGCTTCAC
TGAAGTCATTAATATGTCGTCATCCATGGAACAATAGAATGAGAATATGATATGACCATT
TCTCCCCTCCTCTCTCTCACACACAAAAAAAATTGTTTCTGCAGA