Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g023970.3.1
CDS Infomation

Obg-like ATPase 1 (AHRD V3.3 *** K4B546_SOLLC)
Sequence

ATGCCACCAAAAGCAGCTAAAGGTAAAGAAGTTCCTGCCGAAAGGCCGATTCTTGGCCGT
TTCTCATCCCACTTGAAAATTGGAATCGTAGGATTACCCAATGTGGGGAAGTCTACTCTC
TTCAACACACTGACAAAGTTATCCATTCCGGCAGAAAACTTTCCTTTTTGTACTATTGAG
CCTAATGAAGCTCGAGTGCACGTTCCTGATGAGCGTTTTGAATGGCTCTGTCAACTTTAC
AAGCCCAAGAGTGAGGTGGCTGCCTTTTTGGAAATTCATGACATAGCTGGACTTGTTCGA
GGTGCTCATGCAGGACAAGGATTGGGGAACAGTTTCTTATCCCACATCCGCGCAGTTGAC
GGCATTTTCCATGTTCTACGCGCATTTGAAGATCCAGATATTATCCATGTTGATGACACT
GTTGATCCTGTGAGAGACTTAGAGGTTATAAGTGAGGAACTAAGGCTTAAGGACATCGAG
TTCATGGAGAGAAGGATAGAAGATCTTGATAAGAGTATGAAGAGAAGCAATGACAAACAA
TTGAAAATAGAGCATGAATTATGTCTAAGGGTCAAAGCATCACTCCAGGAAGGCAAAGAT
GTTCGTCTGGGGGACTGGAAAGCTGCAGATGTTGAATTCTTGAATACCTTCCAGCTCCTT
ACTGCAAAACCAATTGTTTACTTGGTTAATATGAATGAGAAAGACTATCAAAGGAAAAAG
AACAAGTTTCTGCCGAAGATTCATGCATGGGTGCAGGAGCACGGTGGTGAAATAATTATT
CCTTTCAGTGCTGCTGTGGAGAGAAACCTTGCTGATATGCCACCAGATGAAGCAGCAAAA
TACTGTGAAGAGAACAAGTTACAAAGTTGCCTCCCAAAGATCATTAAGACTGGATTTGCA
GCCATTAATCTTATTTATTTCTTCACAGCAGGGCCAGATGAGGTTAAATGCTGGCAAATC
CGCAGGCTGATGAAGGCTCCTCAAGCTGCTGGAACAATTCATACAGATTTTGAGAGAGGG
TTCATCTGTGCTGAGGTGATGAAATTTGAAGATCTAAAGGAACTTGGTAGTGAATCGGCT
GTTAAGGCTGCTGGGAAGTATAAGCAGGAGGGTAAGACCTATGTGGTCCAAGATGGTGAT
ATTATATTCTTCAAGTTCAATGTCTCTGGGGGTGGGAAGAAGTGA

Peptide Sequence

PEP ID

Solyc02g023970.3.1
PEP Infomation

Obg-like ATPase 1 (AHRD V3.3 *** K4B546_SOLLC)
Sequence

MPPKAAKGKEVPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLSIPAENFPFCTIE
PNEARVHVPDERFEWLCQLYKPKSEVAAFLEIHDIAGLVRGAHAGQGLGNSFLSHIRAVD
GIFHVLRAFEDPDIIHVDDTVDPVRDLEVISEELRLKDIEFMERRIEDLDKSMKRSNDKQ
LKIEHELCLRVKASLQEGKDVRLGDWKAADVEFLNTFQLLTAKPIVYLVNMNEKDYQRKK
NKFLPKIHAWVQEHGGEIIIPFSAAVERNLADMPPDEAAKYCEENKLQSCLPKIIKTGFA
AINLIYFFTAGPDEVKCWQIRRLMKAPQAAGTIHTDFERGFICAEVMKFEDLKELGSESA
VKAAGKYKQEGKTYVVQDGDIIFFKFNVSGGGKK*

Transcript Sequence

Transcript ID

Solyc02g023970.3.1
Transcript Infomation

Obg-like ATPase 1 (AHRD V3.3 *** K4B546_SOLLC)
Sequence

ATTTTGAGCCCAATCAAGCAACTTTCGGGTCAGCATCTTCTTTTCGCTGGAGCCGACCAC
CATGTATAAAACTTATTTTTCCATTTCTCCACTGATACTGTAACGAACACAAAATCCAAA
ACCCTAAGCTCTTCACCACATCAAGTTTCTGTCCATTTCCCAATTTCTCAGTTATGCCAC
CAAAAGCAGCTAAAGGTAAAGAAGTTCCTGCCGAAAGGCCGATTCTTGGCCGTTTCTCAT
CCCACTTGAAAATTGGAATCGTAGGATTACCCAATGTGGGGAAGTCTACTCTCTTCAACA
CACTGACAAAGTTATCCATTCCGGCAGAAAACTTTCCTTTTTGTACTATTGAGCCTAATG
AAGCTCGAGTGCACGTTCCTGATGAGCGTTTTGAATGGCTCTGTCAACTTTACAAGCCCA
AGAGTGAGGTGGCTGCCTTTTTGGAAATTCATGACATAGCTGGACTTGTTCGAGGTGCTC
ATGCAGGACAAGGATTGGGGAACAGTTTCTTATCCCACATCCGCGCAGTTGACGGCATTT
TCCATGTTCTACGCGCATTTGAAGATCCAGATATTATCCATGTTGATGACACTGTTGATC
CTGTGAGAGACTTAGAGGTTATAAGTGAGGAACTAAGGCTTAAGGACATCGAGTTCATGG
AGAGAAGGATAGAAGATCTTGATAAGAGTATGAAGAGAAGCAATGACAAACAATTGAAAA
TAGAGCATGAATTATGTCTAAGGGTCAAAGCATCACTCCAGGAAGGCAAAGATGTTCGTC
TGGGGGACTGGAAAGCTGCAGATGTTGAATTCTTGAATACCTTCCAGCTCCTTACTGCAA
AACCAATTGTTTACTTGGTTAATATGAATGAGAAAGACTATCAAAGGAAAAAGAACAAGT
TTCTGCCGAAGATTCATGCATGGGTGCAGGAGCACGGTGGTGAAATAATTATTCCTTTCA
GTGCTGCTGTGGAGAGAAACCTTGCTGATATGCCACCAGATGAAGCAGCAAAATACTGTG
AAGAGAACAAGTTACAAAGTTGCCTCCCAAAGATCATTAAGACTGGATTTGCAGCCATTA
ATCTTATTTATTTCTTCACAGCAGGGCCAGATGAGGTTAAATGCTGGCAAATCCGCAGGC
TGATGAAGGCTCCTCAAGCTGCTGGAACAATTCATACAGATTTTGAGAGAGGGTTCATCT
GTGCTGAGGTGATGAAATTTGAAGATCTAAAGGAACTTGGTAGTGAATCGGCTGTTAAGG
CTGCTGGGAAGTATAAGCAGGAGGGTAAGACCTATGTGGTCCAAGATGGTGATATTATAT
TCTTCAAGTTCAATGTCTCTGGGGGTGGGAAGAAGTGAGGTGGTGGTGGATCTGCACGGA
ACTTATGAAGCTGCATCAATTCGTTGGCGAGTTAAAAGATGATATAGTTTTGCCTCATTA
TTAGGTTGCAGATAAAGTTTATCTTGTATGCGAGGTTTCTGCAAAATTTATGACATGTTT
CATAGTCTTTATCTGCATTTGTAGCTTGATGGATATTCGAGTCATTTTTGTCTTCTGTTT
TTGTACTCCTTTCAGTGAGGCTGATGCCAAATTCAATTTATAAGTTATTGGCTGGCATTA
GCATTTGATGTTATGTAGTAATTGAAGAAACAATCTGGAGAATTGCTGATAGATTTAAAT
CGCACAAGATATACGTGTTTCTGAGTTTCTATTATCCAAAAATCAATGTCACCTATAGTG
TCAAGTTGTGCAGGGATCTCAACCTGCATATGATTAAG