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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g022860.1.1
CDS Infomation

FAD-binding Berberine family protein, putative (AHRD V3.3 *** A0A061G993_THECC)
Sequence

ATGGTCACTCTTGATTCAATATTATTGTTTGTCCTATTTTTTCTTCCTTACATAGTCACC
TCTCGTGATGTTACCAATTTATATGGATTATGTCTCTCTAATGAATCTGACAATCAACCA
CACAATAATATTATTCATACTGTATGGTCAAAAAACTACAAATCTATTCTTGAATCATCT
ATACACAATGCTAGGTTCAATAATTCCAATGTACCAAAACCATACTATATAATTGTGCCA
CAAAATAAAGAGCAAGTGAGAGGAGCTATGATTTGTTGCAAAAAAATAGGATTTGAGAGT
AGAATTAGAAGTGGTGGACATGACTATGAAGGTCTTTCATTCATTTCTTACAAACCTTAT
TGTCTAATTGACCTATCTAGTCTCCGAAAAATCGATATCGACGTAGAAGAAAAGACTGCA
TGGGTAGAAGCTGGAGCTACAATAGGGGAACTTTACTACAACATTGGTAATAAGAGTAGA
ACTTTAGGTTTCCCAGCAGGAACTTGTCCCTCAGTAGGTGTTGGAGGTCATATAAGTGGT
GGTGGACAAGGACCTTTGATGAGAAAACACGGCCTCGCAGCAGATAACGTGCTCGATGCC
ACCATCATCAACGTTAATGGAACGATTTTCGATAGGAGAGGCATGGGAGAAGACCTATTT
TGGGCTATCAGAGGTGGTGGAGCAGCTAGTTTTGGGGTGGTTCTATCTTGGAAGTTACAA
CTAGTCGAGGTACCACCCGTGGTCACTCTCTTCACCGTTGCTCGAACTCAGGAGGAAGGT
GCTACTAAGCTTGTGAAAAAATGGCAAAAACTAGTAATGGAATTCCCCAAGGAGCTTTTC
CTAAGAATAAACATAAACCCTAAAAAGGACTCTTTAGGGAGACCATCGATACTAGCTTCA
TTTAACTCGTTGTATCTAGGAAAGAAGAGTCATCTTCGGAGACTAATGAGAAAGAAATTC
CCAGAATTGAAGTTAAAGTCTAAAGATTGTGAAGAGATGAGCTGGATAAATTCAACAATA
AGGATAGATAGTTATAGAAAAGATTCAAGAATTGAAGATTTATTAGAAAGGAATAAAGAA
AAGAAACTTACATTTTATAAAACAAAATCAGACTATGTGACAAAACCTCTATCAGAAAAG
GCATTACAAGGATTATGGGATGTGTTCAAAAGTACAGGAGATGGACTTTTGATTTTGACT
CCTCATGGTGGAAAAATGAGTGAAATATTAGATGATGCAATTCCATTTCCACATAGAAAA
GGAGTTTTGTATAACCTACAATATTTTGCACTATGGCATCATCTTAATCTAACTGTAGAA
AAGATAAAGTTTGATTGGGTTAATGGTGTTTATGATTACATGGGGAAGTTTGTTTCAAGC
CCAAGAACAGCATATCTAAATACAAGGGATTTGGAATTGGGAAGAACACTAATTGGAAAT
GAGAAATACTCACAAGCGCAGAGTTGGGGTGAAATGTATTTCAAAAGAAATTTTGAGAAA
TTGGCTAGGGTCAAATATAGTGTTGACCCAACAAATTACTTCAGAAATGAGCAAAGTATC
CCACCTCTTGCTCCATAA

Peptide Sequence

PEP ID

Solyc02g022860.1.1
PEP Infomation

FAD-binding Berberine family protein, putative (AHRD V3.3 *** A0A061G993_THECC)
Sequence

MVTLDSILLFVLFFLPYIVTSRDVTNLYGLCLSNESDNQPHNNIIHTVWSKNYKSILESS
IHNARFNNSNVPKPYYIIVPQNKEQVRGAMICCKKIGFESRIRSGGHDYEGLSFISYKPY
CLIDLSSLRKIDIDVEEKTAWVEAGATIGELYYNIGNKSRTLGFPAGTCPSVGVGGHISG
GGQGPLMRKHGLAADNVLDATIINVNGTIFDRRGMGEDLFWAIRGGGAASFGVVLSWKLQ
LVEVPPVVTLFTVARTQEEGATKLVKKWQKLVMEFPKELFLRININPKKDSLGRPSILAS
FNSLYLGKKSHLRRLMRKKFPELKLKSKDCEEMSWINSTIRIDSYRKDSRIEDLLERNKE
KKLTFYKTKSDYVTKPLSEKALQGLWDVFKSTGDGLLILTPHGGKMSEILDDAIPFPHRK
GVLYNLQYFALWHHLNLTVEKIKFDWVNGVYDYMGKFVSSPRTAYLNTRDLELGRTLIGN
EKYSQAQSWGEMYFKRNFEKLARVKYSVDPTNYFRNEQSIPPLAP*

Transcript Sequence

Transcript ID

Solyc02g022860.1.1
Transcript Infomation

FAD-binding Berberine family protein, putative (AHRD V3.3 *** A0A061G993_THECC)
Sequence

ATGGTCACTCTTGATTCAATATTATTGTTTGTCCTATTTTTTCTTCCTTACATAGTCACC
TCTCGTGATGTTACCAATTTATATGGATTATGTCTCTCTAATGAATCTGACAATCAACCA
CACAATAATATTATTCATACTGTATGGTCAAAAAACTACAAATCTATTCTTGAATCATCT
ATACACAATGCTAGGTTCAATAATTCCAATGTACCAAAACCATACTATATAATTGTGCCA
CAAAATAAAGAGCAAGTGAGAGGAGCTATGATTTGTTGCAAAAAAATAGGATTTGAGAGT
AGAATTAGAAGTGGTGGACATGACTATGAAGGTCTTTCATTCATTTCTTACAAACCTTAT
TGTCTAATTGACCTATCTAGTCTCCGAAAAATCGATATCGACGTAGAAGAAAAGACTGCA
TGGGTAGAAGCTGGAGCTACAATAGGGGAACTTTACTACAACATTGGTAATAAGAGTAGA
ACTTTAGGTTTCCCAGCAGGAACTTGTCCCTCAGTAGGTGTTGGAGGTCATATAAGTGGT
GGTGGACAAGGACCTTTGATGAGAAAACACGGCCTCGCAGCAGATAACGTGCTCGATGCC
ACCATCATCAACGTTAATGGAACGATTTTCGATAGGAGAGGCATGGGAGAAGACCTATTT
TGGGCTATCAGAGGTGGTGGAGCAGCTAGTTTTGGGGTGGTTCTATCTTGGAAGTTACAA
CTAGTCGAGGTACCACCCGTGGTCACTCTCTTCACCGTTGCTCGAACTCAGGAGGAAGGT
GCTACTAAGCTTGTGAAAAAATGGCAAAAACTAGTAATGGAATTCCCCAAGGAGCTTTTC
CTAAGAATAAACATAAACCCTAAAAAGGACTCTTTAGGGAGACCATCGATACTAGCTTCA
TTTAACTCGTTGTATCTAGGAAAGAAGAGTCATCTTCGGAGACTAATGAGAAAGAAATTC
CCAGAATTGAAGTTAAAGTCTAAAGATTGTGAAGAGATGAGCTGGATAAATTCAACAATA
AGGATAGATAGTTATAGAAAAGATTCAAGAATTGAAGATTTATTAGAAAGGAATAAAGAA
AAGAAACTTACATTTTATAAAACAAAATCAGACTATGTGACAAAACCTCTATCAGAAAAG
GCATTACAAGGATTATGGGATGTGTTCAAAAGTACAGGAGATGGACTTTTGATTTTGACT
CCTCATGGTGGAAAAATGAGTGAAATATTAGATGATGCAATTCCATTTCCACATAGAAAA
GGAGTTTTGTATAACCTACAATATTTTGCACTATGGCATCATCTTAATCTAACTGTAGAA
AAGATAAAGTTTGATTGGGTTAATGGTGTTTATGATTACATGGGGAAGTTTGTTTCAAGC
CCAAGAACAGCATATCTAAATACAAGGGATTTGGAATTGGGAAGAACACTAATTGGAAAT
GAGAAATACTCACAAGCGCAGAGTTGGGGTGAAATGTATTTCAAAAGAAATTTTGAGAAA
TTGGCTAGGGTCAAATATAGTGTTGACCCAACAAATTACTTCAGAAATGAGCAAAGTATC
CCACCTCTTGCTCCATAA