Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g014380.3.1
CDS Infomation

Protein odr-4 (AHRD V3.3 *** A0A0B0P6V2_GOSAR)
Sequence

ATGGTGAAAGTAGTAGTGGGAGAAGAAAGTCAGGTCAAATTAGCTGAAGATCGGCTTAGC
AAATCTGGAGTCCCTTGTCAGGTAGGGCTTGTAATTGGGAATATAAGTGGGAAATTAGAT
CGAGGATTCATATTCGATTTAATCCCAACACCGGTGAATGACAATGGTGAGCCGGCATGT
TCCATAATTGGTGAGGCTAAAGATGATCGGAAAAAGGCACCCAAAGGGAAGTCGCTCCCT
AATTCTTCCACATTGTTCATTGACAAAGATTGGCTTGCTGAACACGCTCGTCAGGTTGGG
AGAATGCTAGTGGGTGGCGTGAAGGTGGTTGGCATCTATGTATGGACCAATGAGAGCTCA
TTCAAAAATTCAACCATCACGCTTTGTCAGGCTGCAAAATCAGTTGCTGAAGCGGCCCCT
TTGTTGGAAGTGCATTGGGATGAAAGATTGCTTGTGCACATTGGTTACAGTCCCTTGAGG
TGGACATGTCGAAATTGCTCGTTGGCTTCAAATATTACATCTGGCAATATACGACCTTGC
GATTTCAAAATGGGAAAAATTCTGAGTACTCGTCAGGCATTCCGATGCACATATGACTTT
GATTGGAGGTTGCCCATATACCAGGGTTCAAGTAACAAAAAATTGGTTGACATTCTTCAT
CATGGGATTTCAATTCATGCCCAAGAGCTTAAAGGTGCCAAAGCATTGATTGATGGGAAA
CTGGCAAATGAGGATGAGCAATTTGATTTAGGTGGTGTACGTGTTGTTGAATTTCTCCTA
CCTTTCATGGAAGATACGTATTTGGAAGTATGCAGCCAAAAAGAGATTACAGGTCTTCTA
GTCTTCAGTGGCTCTGTCTGCTCCTATGCTTACTCAAATTCGAAGGAACCATCTTCTCAA
GCTTTGGCTGACATAAAGGAAGACATAATTAAGAGTCTAAGAAGCAGGTTAGATATCATG
TGTGATGAGGCAGACAGGAAATCAGATTCTAAAGAGGACAGAACTGAAGAGAGCAACAAC
CAGATATTAAGTGGGAGTGCAGTTCTGCAACTTGATTTACAGTTACAGAGAAAACATTGC
AGTATGTCATTTCCTCGAAGAGTATTTTTACCTTGGCTGGCTGATACATTCCTCTGTGAC
TATATACAACCATCTGAATCAGTTGAGGTTCTCGTGGATCATTTTGCCGACCTTATGTCT
CTAGAGTTCCCCAGTATTTCTTCAATAATCTTGGAGCCTGAAGCTGAAACTGAAGCTCCT
GCATTGGTATCCACCACAAAATCATTTTGGGAGGTGTCAACCCCATATGCTCTACTACCT
AAGTCAGACGATCCACTCTCAAATCAAAATAGAGCTGCTACAATCTTGACAAGTGACCAG
AAATCGACAAACACAGCTGGTTTTAACTTGATGATAGCTGTTCTAGTTCTTCTTGTATCA
GTTGTGGTAGGGTTTGTGGTATTTTCTGTTAGGTCATCATCTTAA

Peptide Sequence

PEP ID

Solyc02g014380.3.1
PEP Infomation

Protein odr-4 (AHRD V3.3 *** A0A0B0P6V2_GOSAR)
Sequence

MVKVVVGEESQVKLAEDRLSKSGVPCQVGLVIGNISGKLDRGFIFDLIPTPVNDNGEPAC
SIIGEAKDDRKKAPKGKSLPNSSTLFIDKDWLAEHARQVGRMLVGGVKVVGIYVWTNESS
FKNSTITLCQAAKSVAEAAPLLEVHWDERLLVHIGYSPLRWTCRNCSLASNITSGNIRPC
DFKMGKILSTRQAFRCTYDFDWRLPIYQGSSNKKLVDILHHGISIHAQELKGAKALIDGK
LANEDEQFDLGGVRVVEFLLPFMEDTYLEVCSQKEITGLLVFSGSVCSYAYSNSKEPSSQ
ALADIKEDIIKSLRSRLDIMCDEADRKSDSKEDRTEESNNQILSGSAVLQLDLQLQRKHC
SMSFPRRVFLPWLADTFLCDYIQPSESVEVLVDHFADLMSLEFPSISSIILEPEAETEAP
ALVSTTKSFWEVSTPYALLPKSDDPLSNQNRAATILTSDQKSTNTAGFNLMIAVLVLLVS
VVVGFVVFSVRSSS*

Transcript Sequence

Transcript ID

Solyc02g014380.3.1
Transcript Infomation

Protein odr-4 (AHRD V3.3 *** A0A0B0P6V2_GOSAR)
Sequence

ATTTTAATAGGTAATAGTGGTTGTTCCATATGAGAGTACAGATTGCAGAGAAAAGAAAGA
GATGGTGAAAGTAGTAGTGGGAGAAGAAAGTCAGGTCAAATTAGCTGAAGATCGGCTTAG
CAAATCTGGAGTCCCTTGTCAGGTAGGGCTTGTAATTGGGAATATAAGTGGGAAATTAGA
TCGAGGATTCATATTCGATTTAATCCCAACACCGGTGAATGACAATGGTGAGCCGGCATG
TTCCATAATTGGTGAGGCTAAAGATGATCGGAAAAAGGCACCCAAAGGGAAGTCGCTCCC
TAATTCTTCCACATTGTTCATTGACAAAGATTGGCTTGCTGAACACGCTCGTCAGGTTGG
GAGAATGCTAGTGGGTGGCGTGAAGGTGGTTGGCATCTATGTATGGACCAATGAGAGCTC
ATTCAAAAATTCAACCATCACGCTTTGTCAGGCTGCAAAATCAGTTGCTGAAGCGGCCCC
TTTGTTGGAAGTGCATTGGGATGAAAGATTGCTTGTGCACATTGGTTACAGTCCCTTGAG
GTGGACATGTCGAAATTGCTCGTTGGCTTCAAATATTACATCTGGCAATATACGACCTTG
CGATTTCAAAATGGGAAAAATTCTGAGTACTCGTCAGGCATTCCGATGCACATATGACTT
TGATTGGAGGTTGCCCATATACCAGGGTTCAAGTAACAAAAAATTGGTTGACATTCTTCA
TCATGGGATTTCAATTCATGCCCAAGAGCTTAAAGGTGCCAAAGCATTGATTGATGGGAA
ACTGGCAAATGAGGATGAGCAATTTGATTTAGGTGGTGTACGTGTTGTTGAATTTCTCCT
ACCTTTCATGGAAGATACGTATTTGGAAGTATGCAGCCAAAAAGAGATTACAGGTCTTCT
AGTCTTCAGTGGCTCTGTCTGCTCCTATGCTTACTCAAATTCGAAGGAACCATCTTCTCA
AGCTTTGGCTGACATAAAGGAAGACATAATTAAGAGTCTAAGAAGCAGGTTAGATATCAT
GTGTGATGAGGCAGACAGGAAATCAGATTCTAAAGAGGACAGAACTGAAGAGAGCAACAA
CCAGATATTAAGTGGGAGTGCAGTTCTGCAACTTGATTTACAGTTACAGAGAAAACATTG
CAGTATGTCATTTCCTCGAAGAGTATTTTTACCTTGGCTGGCTGATACATTCCTCTGTGA
CTATATACAACCATCTGAATCAGTTGAGGTTCTCGTGGATCATTTTGCCGACCTTATGTC
TCTAGAGTTCCCCAGTATTTCTTCAATAATCTTGGAGCCTGAAGCTGAAACTGAAGCTCC
TGCATTGGTATCCACCACAAAATCATTTTGGGAGGTGTCAACCCCATATGCTCTACTACC
TAAGTCAGACGATCCACTCTCAAATCAAAATAGAGCTGCTACAATCTTGACAAGTGACCA
GAAATCGACAAACACAGCTGGTTTTAACTTGATGATAGCTGTTCTAGTTCTTCTTGTATC
AGTTGTGGTAGGGTTTGTGGTATTTTCTGTTAGGTCATCATCTTAATTCTTAGGGAACAG
GGATGGTGCGAACAAAAAATATGTTCAGATCAAATCTGATGATACTAACTACTAAGGCTA
TCAACTTCCCTTTCATTTG