Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g014300.2.1
CDS Infomation

Pectinesterase (AHRD V3.3 *** K4B4M9_SOLLC)
Sequence

ATGGCCTCTCTTAATCCATGGGGAAAGCTTGACGAACTTGACAATGAGAGGCACATGGCT
CGTTTAAAGACGAGGAAGAGAATCATAATTATCGCCATATCATCCATAGTTCTTGTGTCC
ATCATTGTCGGTGCAGTGGTTGGAAGTGTTTCTCACAACAAAAACAAATCTTCTCAACAA
AATGATGATGTTTCATCGATGACCTCAACGATTAGTGCTGTATGCAATCTAACCCTCTAT
CCAGACTCGTGTATCTCCAGTCTTTCCCCTTTTGCTGCCAAAGGCAATGCTCTCAAACCT
CAAGATATCTACAAGATGTCTGTTCTAGTTGCCCTCAACGAGCTCTCTGGTGCCTCGGAC
AACTTTTTAAAGAGTGATGCATTTAAAAACATCAATGATCCAGCAGCTGCTAAAGCTATC
CAGAGTTGTCACGAGCTTCTATCCCTTGCATTTGATCATCTGAATGACACATTGTCCGTT
GCTGAAACCTCGTTGCTCGATGCCTTTGATGATCTAAAGACATGGTTGAGTTCTGCAGGG
ACTTATCAGCAGACCTGTATTGATAGTTTTGAAAATGTCACATCAAATAGTGCCATACGA
AAAGCTGCAGGACAGAGTTTGAACAACTCCACACGGTACACTAGTAACAGCTTAGCACTT
ATAAGCTCGTTAGAAAATTCCATTACAAGCTTAGCTGCTATCGGAAAGAGGAGGCGTTTG
ATGGGATGTGGAGATGATGATGAGTACCCGAGCTGGTTGTCATCATCAAATGACAGGAAA
TTGCTGCAGAAATCATCAGAAGAAAAGATAAAGGTGAATGTAGTAGTGGCTAAAGACGGT
TCGGGGAAGTACAAGAGCATTAAGGCTGCACTAAAAGCTGCACCAGAGAAGAGCAAGAAG
AGATTTGTGATCTATGTGAAAAAAGGTGTTTACAAAGAGAATGTTAGGGTTGAGAAGACT
AAATGGAATATTATGATTATTGGTGATGGAAAAGACGCTACCGTCGTTTCTGGTAACCGT
AACTTTATTGATGGAACACCAACATTCCAAAGTGCCACCTTCGCTGTGTTTGGAAAGGGA
TTTGTGGCTCGTGATATTGGATTCGTAAACACAGCTGGTGCGGCGAAGCATCAAGCAGTA
GCATTAATGTCAACAGCAGATGAATCAGTGTTCTACCGCTGCAAAATGGACGCGTTCCAA
GACACTCTTTATGCTCATTCAAACAGACAATTCTACAAAGAATGTGATATCTATGGGACA
GTAGATTTCATCTTTGGTAACTCAGCAGTTGTACTTCAAAACTGCAACATTCTTCCAAGA
AAACCAATGAGTGGGCAACAGAACACTATCACAGCTCAAGGCAAAGTTGACCCAAATCAA
AACACTGGAATTTCTATCCAAAACTGTAGCGTTATGCCGTGGGGAAACCTTACTGGGATC
AACACATTTTTAGGAAGGCCATGGAAGAATTACTCAACAACTGTGTTCATGGAATCAAAC
TTGGGTGGTCTCATTCATCCAAATGGATGGATGCCATGGGTTGGAATCACAGCTCCAAGT
ACCATTTTTTATGCTGAATATAAGAATATTGGACAAGGGGCAAATACAAAAAACAGAGTT
GATTGGCAAGGCTTGAAATTGGGACTTACAAGTAAAATAGCAAGCAAGTTTACAGTTAAG
CCTTTCATTCAGGGGAACAAATGGCTTCCTGCAGCTGGTGTTCCATTTAAGGCTGGTCTT
TGA

Peptide Sequence

PEP ID

Solyc02g014300.2.1
PEP Infomation

Pectinesterase (AHRD V3.3 *** K4B4M9_SOLLC)
Sequence

MASLNPWGKLDELDNERHMARLKTRKRIIIIAISSIVLVSIIVGAVVGSVSHNKNKSSQQ
NDDVSSMTSTISAVCNLTLYPDSCISSLSPFAAKGNALKPQDIYKMSVLVALNELSGASD
NFLKSDAFKNINDPAAAKAIQSCHELLSLAFDHLNDTLSVAETSLLDAFDDLKTWLSSAG
TYQQTCIDSFENVTSNSAIRKAAGQSLNNSTRYTSNSLALISSLENSITSLAAIGKRRRL
MGCGDDDEYPSWLSSSNDRKLLQKSSEEKIKVNVVVAKDGSGKYKSIKAALKAAPEKSKK
RFVIYVKKGVYKENVRVEKTKWNIMIIGDGKDATVVSGNRNFIDGTPTFQSATFAVFGKG
FVARDIGFVNTAGAAKHQAVALMSTADESVFYRCKMDAFQDTLYAHSNRQFYKECDIYGT
VDFIFGNSAVVLQNCNILPRKPMSGQQNTITAQGKVDPNQNTGISIQNCSVMPWGNLTGI
NTFLGRPWKNYSTTVFMESNLGGLIHPNGWMPWVGITAPSTIFYAEYKNIGQGANTKNRV
DWQGLKLGLTSKIASKFTVKPFIQGNKWLPAAGVPFKAGL*

Transcript Sequence

Transcript ID

Solyc02g014300.2.1
Transcript Infomation

Pectinesterase (AHRD V3.3 *** K4B4M9_SOLLC)
Sequence

GAGTATCAAGTAGTGCTTAAGTGAAGGTCTAAAAGATGTGATGAACATTTTGATAATTTA
ATTTTATACTCAAGAAGTTTTGTACGTACTTTATAATATATAGTTAATATAGATAGATTG
GGGGTTTGACTTAGAGGAAAATTCAAGGTGAATATATAATCGGAGAAATGTTGGTGGACT
TGGTGGTGCTATAAGCTCTATTTATGAGTTAGTGGTTAGGGGGGAATTATGAAAAAAGAA
GACATGAGAAGCACGTCGATATAGCCAAAATGAGAATAATTTCCACTTTGGTAATGCCTT
GCACGTACTTAATTAATTCCCGCGTTTATTGTCTTTAAAATAATTATATTGTCTTTTTTT
TCGTTTGTATAAATAAGAGCCAAAATTTGTACATCGAAAACAGCCCATTCATCTAAATTA
AATTCGATTTGCATCATACATCGATCACCATGGCCTCTCTTAATCCATGGGGAAAGCTTG
ACGAACTTGACAATGAGAGGCACATGGCTCGTTTAAAGACGAGGAAGAGAATCATAATTA
TCGCCATATCATCCATAGTTCTTGTGTCCATCATTGTCGGTGCAGTGGTTGGAAGTGTTT
CTCACAACAAAAACAAATCTTCTCAACAAAATGATGATGTTTCATCGATGACCTCAACGA
TTAGTGCTGTATGCAATCTAACCCTCTATCCAGACTCGTGTATCTCCAGTCTTTCCCCTT
TTGCTGCCAAAGGCAATGCTCTCAAACCTCAAGATATCTACAAGATGTCTGTTCTAGTTG
CCCTCAACGAGCTCTCTGGTGCCTCGGACAACTTTTTAAAGAGTGATGCATTTAAAAACA
TCAATGATCCAGCAGCTGCTAAAGCTATCCAGAGTTGTCACGAGCTTCTATCCCTTGCAT
TTGATCATCTGAATGACACATTGTCCGTTGCTGAAACCTCGTTGCTCGATGCCTTTGATG
ATCTAAAGACATGGTTGAGTTCTGCAGGGACTTATCAGCAGACCTGTATTGATAGTTTTG
AAAATGTCACATCAAATAGTGCCATACGAAAAGCTGCAGGACAGAGTTTGAACAACTCCA
CACGGTACACTAGTAACAGCTTAGCACTTATAAGCTCGTTAGAAAATTCCATTACAAGCT
TAGCTGCTATCGGAAAGAGGAGGCGTTTGATGGGATGTGGAGATGATGATGAGTACCCGA
GCTGGTTGTCATCATCAAATGACAGGAAATTGCTGCAGAAATCATCAGAAGAAAAGATAA
AGGTGAATGTAGTAGTGGCTAAAGACGGTTCGGGGAAGTACAAGAGCATTAAGGCTGCAC
TAAAAGCTGCACCAGAGAAGAGCAAGAAGAGATTTGTGATCTATGTGAAAAAAGGTGTTT
ACAAAGAGAATGTTAGGGTTGAGAAGACTAAATGGAATATTATGATTATTGGTGATGGAA
AAGACGCTACCGTCGTTTCTGGTAACCGTAACTTTATTGATGGAACACCAACATTCCAAA
GTGCCACCTTCGCTGTGTTTGGAAAGGGATTTGTGGCTCGTGATATTGGATTCGTAAACA
CAGCTGGTGCGGCGAAGCATCAAGCAGTAGCATTAATGTCAACAGCAGATGAATCAGTGT
TCTACCGCTGCAAAATGGACGCGTTCCAAGACACTCTTTATGCTCATTCAAACAGACAAT
TCTACAAAGAATGTGATATCTATGGGACAGTAGATTTCATCTTTGGTAACTCAGCAGTTG
TACTTCAAAACTGCAACATTCTTCCAAGAAAACCAATGAGTGGGCAACAGAACACTATCA
CAGCTCAAGGCAAAGTTGACCCAAATCAAAACACTGGAATTTCTATCCAAAACTGTAGCG
TTATGCCGTGGGGAAACCTTACTGGGATCAACACATTTTTAGGAAGGCCATGGAAGAATT
ACTCAACAACTGTGTTCATGGAATCAAACTTGGGTGGTCTCATTCATCCAAATGGATGGA
TGCCATGGGTTGGAATCACAGCTCCAAGTACCATTTTTTATGCTGAATATAAGAATATTG
GACAAGGGGCAAATACAAAAAACAGAGTTGATTGGCAAGGCTTGAAATTGGGACTTACAA
GTAAAATAGCAAGCAAGTTTACAGTTAAGCCTTTCATTCAGGGGAACAAATGGCTTCCTG
CAGCTGGTGTTCCATTTAAGGCTGGTCTTTGAGAGAGAGAGATACATTACTATATTTTGG
AGAGTGATCATTTTTTCTTATATTCTCTTTGTTTTTATGTTTTCTTGGTTTAAAACAACC
ATTTGCCCTTTTGTTACACAAGAAATATATATTTCTTGTCAAATTTATTCAATTTTAAAT
GACATTTAATACTTTTACAAATGGAATGATGATGACATGAGTTTCTCTCTTTTGTTTAGC
AATCATCCTTGTGTTGAGATATAC