Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g014220.3.1
CDS Infomation

Endoglucanase (AHRD V3.3 *** K4B4M1_SOLLC)
Sequence

ATGGGAATATCATCAAAGTTACAACTTATTTCTGTGTTGTTAGTTGGCCTACTAGCTTTG
GAAGCAGTTTCTTATAATTTTGACTATGGAAATGCCATGGACAAAACCTTGCTATTCTTT
GAGGCACAAAGGTCTGGAAAATTGCCACCGAATCAACGTGTTAAATGGCGCGGCGATTCA
GGCCTCAAGGATGGTTTTCTCCAAGGGGTGAATTTGGTGGGAGGGTACTATGATGCAGGA
GATCATGTAAAATTTGGATTGCCTATGGCATATAGTTTGACAATGTTAGGATGGAGCGTT
GTTGACTATAGGAAGGAAATAGCAGATGTTAATCAGATGGGAAATACCTTGGCTGCTATT
AAATGGGGTACTGATTACTTCATCAAAGCCCATACTCAACCCAATGTCCTCTGGGCTCAG
GTTGGAGATGGTGATTCTGATCACTATTGTTGGGAGAGAGCAGAAGATATGACAACCCCA
AGAACTGCTTACAAGCTTGATCCTAGCCACCCTGGTTCTGACCTTGCTGGTGAAGCTGCT
GCTGCTTTTGCTGCTGCCTCTCTTGCATTCAAGCCTTATGACTCTTCCTACTCTAATCTC
CTTTTGGTCCATGCAAAACAGCTATTCTCATTTGCGGATACCTTCAGAGGTTTGTATGAT
GATTCCATTCCAAATGCTCAAGCATTCTACACATCATCTGGTTATTCGGACGAGCTTCTA
TGGGCTGCTGCATGGCTCTATCGAGCAACTTATGACGAGTTCTACTTAAAGTATGTGGTG
GACAATGCAGTATCCTTGGGAGGAACTGGATGGGCAGTCAGGGAATTTTCCTGGGACAAC
AAGTATGCTGGTGTTCAAATTCTTCTGACCAAGATTCTCTTAGATGGAGCTGGTGGATCA
TACACTCCAACGTTGAAACAGTACCAGGCTAAAGCAGATTACTTTACCTGTGCTTGTTTG
CAGAAAAATGACGGATACAACGTAGCCCTGACTCCTGGAGGCCTGATCTATGTTCGCGAA
TGGAATAATCTGCAATACGCTTCATCAGCTGCTTTCCTACTTTCCATGTACTCCGATTAT
CTTTCTGAGAAAAAAATTGTATTACAATGTCCTGAAGGTCAAGTTCAACCATCAGATGTC
CTTTCATTTGCTAAATCACAGGCTGATTACATTCTTGGTAAAAATCCCAAGGCCATCAGC
TACTTAGTTGGTTATGGACAAAACTACCCAATCCACGTTCACCACAGAGGCGCCTCCATT
GCCCCTATTTCAGTACTACATACTGCTGTTAGTTGCATAGAAGGATTTGAGACTTGGTAT
CGCCGCCCTCAGGCAAATCCCAATATTATCCACGGTGCCCTTTTGGGAGGTCCAAGCAAA
ACTGATGACTTCAGTGATGACAGGTCCAATTATGAACAAACTGAACCAACATTATCTGGT
TCCGCTCCTCTTATAGGACTCTTCGTCAAGTTGCAGTCCCTCTCAGGCTATCGAGGCTCT
TATCGTCATATATCACCAACACCATACCAGAAGCCTCCAGCTTCCTATCATCCACAGCCA
TCAACACCCTACTACAAGGCTCCAGGATCATCAAACTATAAAGCTCCAGGTGCACCAGTG
ACATTCTTGCACTCCATAATTTCTACATGGACAATTGGTCCAACAACTTACTACAAGCAT
AGAGTGGTGGTGAAGAACACATCTCAAAAGCCAATCACAAATCTTAAGTTAATAATTGAA
AACCTTTCAGGATCATTGTGGGGGCTTAGTCCATGCCCAGAGAAGAACATATATGAGCTT
CCTCAATGGATTAAAATACTAAAGCCTGGTTCAGAACTCACTTTTGTATATGTTCAAGGA
GGTGCTCAAGCCAAGGTTTCAATAAAGAGTTACCACTGA

Peptide Sequence

PEP ID

Solyc02g014220.3.1
PEP Infomation

Endoglucanase (AHRD V3.3 *** K4B4M1_SOLLC)
Sequence

MGISSKLQLISVLLVGLLALEAVSYNFDYGNAMDKTLLFFEAQRSGKLPPNQRVKWRGDS
GLKDGFLQGVNLVGGYYDAGDHVKFGLPMAYSLTMLGWSVVDYRKEIADVNQMGNTLAAI
KWGTDYFIKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPRTAYKLDPSHPGSDLAGEAA
AAFAAASLAFKPYDSSYSNLLLVHAKQLFSFADTFRGLYDDSIPNAQAFYTSSGYSDELL
WAAAWLYRATYDEFYLKYVVDNAVSLGGTGWAVREFSWDNKYAGVQILLTKILLDGAGGS
YTPTLKQYQAKADYFTCACLQKNDGYNVALTPGGLIYVREWNNLQYASSAAFLLSMYSDY
LSEKKIVLQCPEGQVQPSDVLSFAKSQADYILGKNPKAISYLVGYGQNYPIHVHHRGASI
APISVLHTAVSCIEGFETWYRRPQANPNIIHGALLGGPSKTDDFSDDRSNYEQTEPTLSG
SAPLIGLFVKLQSLSGYRGSYRHISPTPYQKPPASYHPQPSTPYYKAPGSSNYKAPGAPV
TFLHSIISTWTIGPTTYYKHRVVVKNTSQKPITNLKLIIENLSGSLWGLSPCPEKNIYEL
PQWIKILKPGSELTFVYVQGGAQAKVSIKSYH*

Transcript Sequence

Transcript ID

Solyc02g014220.3.1
Transcript Infomation

Endoglucanase (AHRD V3.3 *** K4B4M1_SOLLC)
Sequence

CTCCATGCACATATTTTGTATATATCTTCTTTCATTTGATTCTTCTAATTCCCTATCTTA
ATTTTATAGTTTTAGAGAAAGAAAGAAGGATGGGAATATCATCAAAGTTACAACTTATTT
CTGTGTTGTTAGTTGGCCTACTAGCTTTGGAAGCAGTTTCTTATAATTTTGACTATGGAA
ATGCCATGGACAAAACCTTGCTATTCTTTGAGGCACAAAGGTCTGGAAAATTGCCACCGA
ATCAACGTGTTAAATGGCGCGGCGATTCAGGCCTCAAGGATGGTTTTCTCCAAGGGGTGA
ATTTGGTGGGAGGGTACTATGATGCAGGAGATCATGTAAAATTTGGATTGCCTATGGCAT
ATAGTTTGACAATGTTAGGATGGAGCGTTGTTGACTATAGGAAGGAAATAGCAGATGTTA
ATCAGATGGGAAATACCTTGGCTGCTATTAAATGGGGTACTGATTACTTCATCAAAGCCC
ATACTCAACCCAATGTCCTCTGGGCTCAGGTTGGAGATGGTGATTCTGATCACTATTGTT
GGGAGAGAGCAGAAGATATGACAACCCCAAGAACTGCTTACAAGCTTGATCCTAGCCACC
CTGGTTCTGACCTTGCTGGTGAAGCTGCTGCTGCTTTTGCTGCTGCCTCTCTTGCATTCA
AGCCTTATGACTCTTCCTACTCTAATCTCCTTTTGGTCCATGCAAAACAGCTATTCTCAT
TTGCGGATACCTTCAGAGGTTTGTATGATGATTCCATTCCAAATGCTCAAGCATTCTACA
CATCATCTGGTTATTCGGACGAGCTTCTATGGGCTGCTGCATGGCTCTATCGAGCAACTT
ATGACGAGTTCTACTTAAAGTATGTGGTGGACAATGCAGTATCCTTGGGAGGAACTGGAT
GGGCAGTCAGGGAATTTTCCTGGGACAACAAGTATGCTGGTGTTCAAATTCTTCTGACCA
AGATTCTCTTAGATGGAGCTGGTGGATCATACACTCCAACGTTGAAACAGTACCAGGCTA
AAGCAGATTACTTTACCTGTGCTTGTTTGCAGAAAAATGACGGATACAACGTAGCCCTGA
CTCCTGGAGGCCTGATCTATGTTCGCGAATGGAATAATCTGCAATACGCTTCATCAGCTG
CTTTCCTACTTTCCATGTACTCCGATTATCTTTCTGAGAAAAAAATTGTATTACAATGTC
CTGAAGGTCAAGTTCAACCATCAGATGTCCTTTCATTTGCTAAATCACAGGCTGATTACA
TTCTTGGTAAAAATCCCAAGGCCATCAGCTACTTAGTTGGTTATGGACAAAACTACCCAA
TCCACGTTCACCACAGAGGCGCCTCCATTGCCCCTATTTCAGTACTACATACTGCTGTTA
GTTGCATAGAAGGATTTGAGACTTGGTATCGCCGCCCTCAGGCAAATCCCAATATTATCC
ACGGTGCCCTTTTGGGAGGTCCAAGCAAAACTGATGACTTCAGTGATGACAGGTCCAATT
ATGAACAAACTGAACCAACATTATCTGGTTCCGCTCCTCTTATAGGACTCTTCGTCAAGT
TGCAGTCCCTCTCAGGCTATCGAGGCTCTTATCGTCATATATCACCAACACCATACCAGA
AGCCTCCAGCTTCCTATCATCCACAGCCATCAACACCCTACTACAAGGCTCCAGGATCAT
CAAACTATAAAGCTCCAGGTGCACCAGTGACATTCTTGCACTCCATAATTTCTACATGGA
CAATTGGTCCAACAACTTACTACAAGCATAGAGTGGTGGTGAAGAACACATCTCAAAAGC
CAATCACAAATCTTAAGTTAATAATTGAAAACCTTTCAGGATCATTGTGGGGGCTTAGTC
CATGCCCAGAGAAGAACATATATGAGCTTCCTCAATGGATTAAAATACTAAAGCCTGGTT
CAGAACTCACTTTTGTATATGTTCAAGGAGGTGCTCAAGCCAAGGTTTCAATAAAGAGTT
ACCACTGATAGAGAGCTGACCAGTTATTGCCCAATTTTCCTGAGGCTCAAGATATTTTTT
TTCTTTTTCATGTTTGAACTATTGACATTTGTAACATGGCAATGAAGATGCTTTTTGCAA
CCGTTATAGTTTGTGAACTGCTATTATTTTTTTCTCTTCTCTTCAACTTGTAAGAAAGAA
AATGCGTTTACTTCATTTTCTCGCCATAATGAGATAATTGGTAGCACCTAGAGCTTCAAT
ACAACAACTCAACAAATCATTACATAATAATTATGACCTACCTTTGTAATATATTCTCAA
GGGAGTAAAAGCACTACGAACCAACCTTTGTGAGATTTGCCTCAAATCTCTACTTAAAAC
GTGAGCAAAAACAAAAGAGACTAACGCCTTATTACTTTGGCTTTGCAGATGCTTTCAAAT
ACTCTAGCACTATATTCCATTCATTGTATATATCCCTTTTTCTTCCTAGTACAATTGTGC
CTTTCAAGATTCTACCATAATACCATAATCTCAAAGGCCTTTACCGCTCAAGGAACAAAT
ACCTATTAAAAAATGTTTGGGAAAATGTACAAGTATCCCCTCAACCTATGCCCGAAATCC
CAGA