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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g112220.3.1
CDS Infomation

Kinase family protein (AHRD V3.3 *** U5GGQ9_POPTR)
Sequence

ATGGGAGTTTGTTTCAGTTCTAATAGTCAGAGCCCATCCCATTTCAGCTCAGGCATATCA
TCACAGACGACAACAACTACATCCTCCTCCACGGTAAGCAACGTCTCCGGGAATAGCCAA
TTCTCAGCAGCCAGTGGAGTTGATGAGGTTTATGGACAGATATTACCACATCCTAATTTA
AGGACATTTTCTTTTACCGAACTCAAGACCGCTACAAGAAATTTTAGAAGTGATACCGTC
CTGGGAGAAGGCGGTTTTGGCAAAGTTTACAAGGGTTGGCTTGATGACAGGGCTTCATCC
AGGACAGCTAGTGCCACTGGCACTGTCATTGCTGTTAAGAAATTGAATTCTGAAAGTTTA
CAAGGACTTGAAGAGTGGCAGTGTGAGGTTAATTTTCTTGGAACACTTTCACATCCTAAC
CTGGTCAAACTCTTGGGATACTGCTGGGAAGATAAAGAACTATTGCTTGTCTATGAGTTT
ATGCAAAAGGGCAGCTTGGAGAACCATCTTTTTGGAAGGGGCTCTGCTGTTCAGCCACTT
CCGTGGAATATAAGGCTTCAAATAGTGATTGGTGCAGCCCGAGGCTTGGCATTCCTACAT
GCATCAGAGAAGCAAGTCATTTACAGAGACTTCAAGGCCTCAAATATATTACTTGATGGC
GTACGTTTCTTTTTCTTTTCCCCTGGAACATTGTCGTGCTTATCACAATCTTACAATGCA
AAGATATCAGATTTTGGCTTGGCCAAACTCGGTCCTTCGGCTAGTCAATCACACGTGACA
ACACGGGTGATGGGAACGTATGGTTATGCTGCTCCCGAGTATGTTCAAACAGGACACTTG
TACGTGAAAAGCGATGTCTATGGTTTTGGTGTTGTGCTAGTGGAAATGTTAACAGGTCTA
CGGGCACTAGACACAAACCGCCCAAGCAACCAGCATAATCTGGTTGAATGGATTAAGCCA
CATTTATCTGATAGAAGGAAGTTGAAGGACAAGATGGATTCGCGGCTGGAAGGAAGATAT
CCATCCAGAGCTGCAGTTCAAATAGCACAACTGGCACTGTCATGTCTTGGACCTGAACCA
AAAACCAGACCAGGAATGAAAGAAGTAGTGGAGAAACTAGAACAGATTGAGGCAGCCAAT
GAAAGACCCAAGGAGCCTAGAATAACTTCCAGACATCAGACTGCTTATAGATACGGTCAG
CCACCTTTGCACCATCGTTCTTCACTTCATCCAAGGAACGATGTAAATCGAGCCTATCCA
CTCCCAAAAAGAGCATCATGA

Peptide Sequence

PEP ID

Solyc01g112220.3.1
PEP Infomation

Kinase family protein (AHRD V3.3 *** U5GGQ9_POPTR)
Sequence

MGVCFSSNSQSPSHFSSGISSQTTTTTSSSTVSNVSGNSQFSAASGVDEVYGQILPHPNL
RTFSFTELKTATRNFRSDTVLGEGGFGKVYKGWLDDRASSRTASATGTVIAVKKLNSESL
QGLEEWQCEVNFLGTLSHPNLVKLLGYCWEDKELLLVYEFMQKGSLENHLFGRGSAVQPL
PWNIRLQIVIGAARGLAFLHASEKQVIYRDFKASNILLDGVRFFFFSPGTLSCLSQSYNA
KISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVQTGHLYVKSDVYGFGVVLVEMLTGL
RALDTNRPSNQHNLVEWIKPHLSDRRKLKDKMDSRLEGRYPSRAAVQIAQLALSCLGPEP
KTRPGMKEVVEKLEQIEAANERPKEPRITSRHQTAYRYGQPPLHHRSSLHPRNDVNRAYP
LPKRAS*

Transcript Sequence

Transcript ID

Solyc01g112220.3.1
Transcript Infomation

Kinase family protein (AHRD V3.3 *** U5GGQ9_POPTR)
Sequence

TCTCAATCTCATCCCATCCCTCTTTCAGCCGAAGAATAACTTGCTTAATAATCATCAGAT
AGAGATATGGGAGTTTGTTTCAGTTCTAATAGTCAGAGCCCATCCCATTTCAGCTCAGGC
ATATCATCACAGACGACAACAACTACATCCTCCTCCACGGTAAGCAACGTCTCCGGGAAT
AGCCAATTCTCAGCAGCCAGTGGAGTTGATGAGGTTTATGGACAGATATTACCACATCCT
AATTTAAGGACATTTTCTTTTACCGAACTCAAGACCGCTACAAGAAATTTTAGAAGTGAT
ACCGTCCTGGGAGAAGGCGGTTTTGGCAAAGTTTACAAGGGTTGGCTTGATGACAGGGCT
TCATCCAGGACAGCTAGTGCCACTGGCACTGTCATTGCTGTTAAGAAATTGAATTCTGAA
AGTTTACAAGGACTTGAAGAGTGGCAGTGTGAGGTTAATTTTCTTGGAACACTTTCACAT
CCTAACCTGGTCAAACTCTTGGGATACTGCTGGGAAGATAAAGAACTATTGCTTGTCTAT
GAGTTTATGCAAAAGGGCAGCTTGGAGAACCATCTTTTTGGAAGGGGCTCTGCTGTTCAG
CCACTTCCGTGGAATATAAGGCTTCAAATAGTGATTGGTGCAGCCCGAGGCTTGGCATTC
CTACATGCATCAGAGAAGCAAGTCATTTACAGAGACTTCAAGGCCTCAAATATATTACTT
GATGGCGTACGTTTCTTTTTCTTTTCCCCTGGAACATTGTCGTGCTTATCACAATCTTAC
AATGCAAAGATATCAGATTTTGGCTTGGCCAAACTCGGTCCTTCGGCTAGTCAATCACAC
GTGACAACACGGGTGATGGGAACGTATGGTTATGCTGCTCCCGAGTATGTTCAAACAGGA
CACTTGTACGTGAAAAGCGATGTCTATGGTTTTGGTGTTGTGCTAGTGGAAATGTTAACA
GGTCTACGGGCACTAGACACAAACCGCCCAAGCAACCAGCATAATCTGGTTGAATGGATT
AAGCCACATTTATCTGATAGAAGGAAGTTGAAGGACAAGATGGATTCGCGGCTGGAAGGA
AGATATCCATCCAGAGCTGCAGTTCAAATAGCACAACTGGCACTGTCATGTCTTGGACCT
GAACCAAAAACCAGACCAGGAATGAAAGAAGTAGTGGAGAAACTAGAACAGATTGAGGCA
GCCAATGAAAGACCCAAGGAGCCTAGAATAACTTCCAGACATCAGACTGCTTATAGATAC
GGTCAGCCACCTTTGCACCATCGTTCTTCACTTCATCCAAGGAACGATGTAAATCGAGCC
TATCCACTCCCAAAAAGAGCATCATGAATATGATAATACTATTATAGCTATGTTAATTTA
GTTGTCCAAATACAAATGTTCTGTTTCTTTTTTTTTTGGTTGCCTGACGTCTGAGCTTGT
GAGATGAAGTGTTAAGGCTCTGTATGGCATTGGGTTGTGCTTGTTTCAGTGATATATATG
TATAGAGTTCATTATTTTGTACATTTAAGGCGATTCAAGATTTCCAATCCCCTTTGTTAT
GGATATGGTTGAGTATGCATGATAGTGTGCCTGGTGATGAGAAGTTAGAAAATGGAAGCA
GATAATCAACACCTGCACTGCACACAGAGTTGATGCATCTCTTATTTTGAGATATATGTA
TTCCTAGAATCACTATATCTCTATTCTAATCTCTGCTTCATGGATCCATTTCAGGTTTC