Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g112200.3.1
CDS Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9MYZ7_POPTR)
Sequence	ATGCGTGTCCGTTGGAACTCTAACTGGTGTAGTAGGTTAAGAGAATTACTATTCCATGGC AAATCTCAAGACGTTCTTCTCTACTACCGTGAATTGAACAAGACCAGGGTTGAGTTGATG GACCATTCCGTTTTCCCTATCCTTTTCAAAGCATGTTTAAATCTCTCCGCTACACACGGC CACGGCAACTCTATCCACGCCTCTCTGGTTAAGCAGGGATTCTTAGCTTTCACTTCCGTC GGTAATTCTATGATGGACTTCTATGCTAAATCTGGAGACTTGGGTTCTGCGCTTGTGGTT TTTAACTGCATGGACAACAAAGATTCAGTTTCCTGGAATGTAATCATTCATGGCCATTTA TTATTATTAGCTTCTCCCCGAGGACTATGCTTATTCACTCAGGCTTGGGCTGCAGGTTTT GAACCCAACATCTCCACCTTTGTACTTGTCATTCAGGCTTGTCGCAATCTTGCAGCTTTT GAGGCTGGCCGGACGATCCATGCTTCTACCATTCGTGCTGGGTATTCAAGTATTACTTCC ATCCACAATTCGCTCCTCAGTTTCTATGCTCAATTTGAAATGCACCTTGCGCACAACCTT TTTGATGAAATGACTGAAAGAGACGTTATTTCTTGGAGTGTCATGATTGCTACCTATGCC CAAAGTGAGGACGAATCAGTGCTTGCCCTGGAGTTTTTTCAACGGATGATTGATTTTGGG GAACCACCAGACGGACAATCTGTGGTAAGTGTACTCAAAGCCTGCACCAAATTGAAGGCC ATTAGACTGGGAGAGTCAATTCACGGATTTGTTATCTCTAGAGGTATGGGTTATGACTTG TTCGTACACAACTCTCTGATTGACTTGTATTCTAAATGCAATGACATTGATTCTTCATTG AGAGTTTTCGGGGGAATTCCTGAGAAGAATGTCGTGTCCTGGAACTCTTTGTTGTCTGGA CTTGTGCAGAATCAGATGCATCCTGAGGCCCTTACTTTATTTGATTCAATGCACAAGGCT GGAATTGAATCTGATGAGGTGACTCTGGTCAATCTGCTGCAGTTATGTAAGTTCTTCCTT GACCCTTACCAGTGCAAGTTGATACATTCCAGAATACTTCGACAAGGTTTTGAGTTGAAT GAGTTGGTTACAAACTCTTTGATCGATGCATATGCAAGTTGCAATCTCATAACTTATGCA TGGAGTCAATTCAATAATATGATAACACGAGATGCAGTAACTTGGAGCACCATGATTGCT GGCTTCACCCACTGTGGCATGCCTGACGAAGCAATTGCTGTTTTCCGAGAGATGAGCCAC ACTTCTGAACGGCCCAATGCTGTTACCATGTTAAATCTTCTTGAAGCTTGCTCTCTTTCT GCAGATGTGAAAAGATCAAGATGGGCTCATGGCATTGCTATTCGAGGAGGGTTGGAATCT AATGTAGTAGTGGGAACTGCCATCTTAGATATGTACTCAAAATGTGGTTCCATTGGATCT TCAAGGAAAGTGTTTGACCGCATTCCATACAAGAATGTTGTGACCTGGAGTGCCATTATT GCAGCATATGGTATGATTGGCCTCCCAAATGAAGCTCTAGCCCTATTTCATGAGATGAAA GTTTGTGGTCTGAGGCCAAACCAAGTTACTGCACTGTCTCTTTTATCGGCTTGTAGTCAT GGGGGATTGGTAGAAGAAGGGGTCTCTCTTTTTGAGGAGTTAATTTGGGATCATGAGGTT GAACTTGTCATAGAACATTACTCTTGCCTTGTAGATTTGTTAGCTCGGGCTGGAAAGGTT GATAGTGCAATGAATTTGATAGGAAAGCTAGGTGTTGGAGTAAAGCCTGGTGCAAGTGCA TGGGGGGCACTGTTGAGTGCTTGTAGGAACTATGAAAACTATGAGTTTGGTGCCATTGCC CTCCCTCAAGTAGTTGAACTTGAGGCGTCAAGCTCAGCTGGCTATCTGCTTGCATCAAAC ATGTATGCATCAGGTTGTTCATGGGTTGATGCCACTAAAATGAGAATGTTGGCCAAGGAA GGAGGGGTCAAAGTTATAGCTGGGTATAGCTTAGTGTATGTAAATGGTAAGGCATGCAGG TTTCTTGCGGGAGAAAACCACCATCGTTTGTCTGATGAATTGCAGTTTGCTATTCAGCAA CTGCACTCGAGCATGAAAATGGACATAAACTTTTGTGGAGTAGCCTCATGCAATCTAGTG ATAGGCACTTCCCTTTTTTATTCACTATCTGCTAATTAA

Peptide Sequence

PEP ID	Solyc01g112200.3.1
PEP Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9MYZ7_POPTR)
Sequence	MRVRWNSNWCSRLRELLFHGKSQDVLLYYRELNKTRVELMDHSVFPILFKACLNLSATHG HGNSIHASLVKQGFLAFTSVGNSMMDFYAKSGDLGSALVVFNCMDNKDSVSWNVIIHGHL LLLASPRGLCLFTQAWAAGFEPNISTFVLVIQACRNLAAFEAGRTIHASTIRAGYSSITS IHNSLLSFYAQFEMHLAHNLFDEMTERDVISWSVMIATYAQSEDESVLALEFFQRMIDFG EPPDGQSVVSVLKACTKLKAIRLGESIHGFVISRGMGYDLFVHNSLIDLYSKCNDIDSSL RVFGGIPEKNVVSWNSLLSGLVQNQMHPEALTLFDSMHKAGIESDEVTLVNLLQLCKFFL DPYQCKLIHSRILRQGFELNELVTNSLIDAYASCNLITYAWSQFNNMITRDAVTWSTMIA GFTHCGMPDEAIAVFREMSHTSERPNAVTMLNLLEACSLSADVKRSRWAHGIAIRGGLES NVVVGTAILDMYSKCGSIGSSRKVFDRIPYKNVVTWSAIIAAYGMIGLPNEALALFHEMK VCGLRPNQVTALSLLSACSHGGLVEEGVSLFEELIWDHEVELVIEHYSCLVDLLARAGKV DSAMNLIGKLGVGVKPGASAWGALLSACRNYENYEFGAIALPQVVELEASSSAGYLLASN MYASGCSWVDATKMRMLAKEGGVKVIAGYSLVYVNGKACRFLAGENHHRLSDELQFAIQQ LHSSMKMDINFCGVASCNLVIGTSLFYSLSAN*

Transcript Sequence

Transcript ID	Solyc01g112200.3.1
Transcript Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9MYZ7_POPTR)
Sequence	ATGCGTGTCCGTTGGAACTCTAACTGGTGTAGTAGGTTAAGAGAATTACTATTCCATGGC AAATCTCAAGACGTTCTTCTCTACTACCGTGAATTGAACAAGACCAGGGTTGAGTTGATG GACCATTCCGTTTTCCCTATCCTTTTCAAAGCATGTTTAAATCTCTCCGCTACACACGGC CACGGCAACTCTATCCACGCCTCTCTGGTTAAGCAGGGATTCTTAGCTTTCACTTCCGTC GGTAATTCTATGATGGACTTCTATGCTAAATCTGGAGACTTGGGTTCTGCGCTTGTGGTT TTTAACTGCATGGACAACAAAGATTCAGTTTCCTGGAATGTAATCATTCATGGCCATTTA TTATTATTAGCTTCTCCCCGAGGACTATGCTTATTCACTCAGGCTTGGGCTGCAGGTTTT GAACCCAACATCTCCACCTTTGTACTTGTCATTCAGGCTTGTCGCAATCTTGCAGCTTTT GAGGCTGGCCGGACGATCCATGCTTCTACCATTCGTGCTGGGTATTCAAGTATTACTTCC ATCCACAATTCGCTCCTCAGTTTCTATGCTCAATTTGAAATGCACCTTGCGCACAACCTT TTTGATGAAATGACTGAAAGAGACGTTATTTCTTGGAGTGTCATGATTGCTACCTATGCC CAAAGTGAGGACGAATCAGTGCTTGCCCTGGAGTTTTTTCAACGGATGATTGATTTTGGG GAACCACCAGACGGACAATCTGTGGTAAGTGTACTCAAAGCCTGCACCAAATTGAAGGCC ATTAGACTGGGAGAGTCAATTCACGGATTTGTTATCTCTAGAGGTATGGGTTATGACTTG TTCGTACACAACTCTCTGATTGACTTGTATTCTAAATGCAATGACATTGATTCTTCATTG AGAGTTTTCGGGGGAATTCCTGAGAAGAATGTCGTGTCCTGGAACTCTTTGTTGTCTGGA CTTGTGCAGAATCAGATGCATCCTGAGGCCCTTACTTTATTTGATTCAATGCACAAGGCT GGAATTGAATCTGATGAGGTGACTCTGGTCAATCTGCTGCAGTTATGTAAGTTCTTCCTT GACCCTTACCAGTGCAAGTTGATACATTCCAGAATACTTCGACAAGGTTTTGAGTTGAAT GAGTTGGTTACAAACTCTTTGATCGATGCATATGCAAGTTGCAATCTCATAACTTATGCA TGGAGTCAATTCAATAATATGATAACACGAGATGCAGTAACTTGGAGCACCATGATTGCT GGCTTCACCCACTGTGGCATGCCTGACGAAGCAATTGCTGTTTTCCGAGAGATGAGCCAC ACTTCTGAACGGCCCAATGCTGTTACCATGTTAAATCTTCTTGAAGCTTGCTCTCTTTCT GCAGATGTGAAAAGATCAAGATGGGCTCATGGCATTGCTATTCGAGGAGGGTTGGAATCT AATGTAGTAGTGGGAACTGCCATCTTAGATATGTACTCAAAATGTGGTTCCATTGGATCT TCAAGGAAAGTGTTTGACCGCATTCCATACAAGAATGTTGTGACCTGGAGTGCCATTATT GCAGCATATGGTATGATTGGCCTCCCAAATGAAGCTCTAGCCCTATTTCATGAGATGAAA GTTTGTGGTCTGAGGCCAAACCAAGTTACTGCACTGTCTCTTTTATCGGCTTGTAGTCAT GGGGGATTGGTAGAAGAAGGGGTCTCTCTTTTTGAGGAGTTAATTTGGGATCATGAGGTT GAACTTGTCATAGAACATTACTCTTGCCTTGTAGATTTGTTAGCTCGGGCTGGAAAGGTT GATAGTGCAATGAATTTGATAGGAAAGCTAGGTGTTGGAGTAAAGCCTGGTGCAAGTGCA TGGGGGGCACTGTTGAGTGCTTGTAGGAACTATGAAAACTATGAGTTTGGTGCCATTGCC CTCCCTCAAGTAGTTGAACTTGAGGCGTCAAGCTCAGCTGGCTATCTGCTTGCATCAAAC ATGTATGCATCAGGTTGTTCATGGGTTGATGCCACTAAAATGAGAATGTTGGCCAAGGAA GGAGGGGTCAAAGTTATAGCTGGGTATAGCTTAGTGTATGTAAATGGTAAGGCATGCAGG TTTCTTGCGGGAGAAAACCACCATCGTTTGTCTGATGAATTGCAGTTTGCTATTCAGCAA CTGCACTCGAGCATGAAAATGGACATAAACTTTTGTGGAGTAGCCTCATGCAATCTAGTG ATAGGCACTTCCCTTTTTTATTCACTATCTGCTAATTAATTTTTATCAAAATTCAACTAC AGAATTTCCTTT