Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g112190.3.1
CDS Infomation

Plant regulator RWP-RK family protein (AHRD V3.3 *** AT4G35270.4)
Sequence

ATGGAAGATGCTGCCTTTACGCTCTTGGCTAAGCTCCATGACGACAATAATGCCACTGAT
TTTACTGAATTCGGATTCTGGCTAGAGGCAACTGATCAACCATCCAATTCCAATTCCAAT
TATTGTACTTCTAATCAAATGGATTCTGCACCACCTACCCAATCTCGGAGGAAGTTATGG
ATTGGACCAAACAACCCAAATCCTACTAGTAGTATACCACCAGTAAACACCAGATTGGTG
CAGGCCATTGAGTACCTAAAGAATTCAACAACCCATAATAAAGAGGTCCTCATTCAGATA
TGGGTCCCTGTCAACAGAGGAGGTAAACATGTACTTATTACTAATAATCAACCATACTTC
CTCAACCCAAACTCCCACAGCCTATTACAGTACAGAAATGTCTCTCAAAATTACCAATTT
GCTGCTGACAAGGATTCGAACGAGTTGGTTGGCTTGCCTGGACGCGTCTTCTTGAAAAAG
CTGCCCGAGTGGACTCCTGATGTTCGTTTTTTCAAAAGCGAGGAGTATCCGCGAGTTAAT
TATGCTCATCAGCATAACGTTAGGGGATCCATTGCTGTTCCTGTTTTTGAAACTGGCAGT
GGAACTTGCTTGGGTGTGGTTGAGATTGTAACAACTATTCAGAAAACTCACTATCACCTG
GAGCTTGAACATGTCTGCAAAGCTCTTGAGGCTGTTAATCTAAGAAGTTCTGGTATCTCA
TCAAATCCTTCCAAAATCAAGGATCAGGATTGCAATGAATCTTACCTAGCTGCATTGGCC
GAGATTCAATATATTTTGACATGTGTGTGTGATACACACAAGTTGCCATTGGCTCAGACT
TGGGCCCCATGCATACAACAAGGTAAAGGTGGGTGCCTGCAATCTGATGAGAACTTTGCT
TCTTGTGTTTCGACAGTCGACTCATCTTGCTATGTGCGCGATCAACATGTGGTGCCTTTT
CATTTAGCATGTTCTGAGCATCACTTGCTTAAAGGTGAAGGAGTTGCAGGTGGAGCATTC
AATACAAACCAGCCATGTTTTGCTACGGATATTACGGCCTTTAGCAAGGCAGAATATCCA
TTGTCACACCACGCCAGGATGTTTGGATTATGTTCTGCTGTAGCAATACGCCTTCGAAGT
ATATATACAGGCTCCGCTGACTTTGTCTTGGAGTTTTTCTTGCCACTTGATTGCAAGAAT
ACTGAAGAACAAAAAATAATGCTAAGTTCACTGTCTTCTGTGATACAACAAAGTTGCCGA
AGCTTACGTGTTGTCACGGATCAAGAATTACAGGAGGAAAAAGAAGTTGTACGCCTTCCC
ATTGGTGAAGAAGAATCAAGAAAACCAGTCTCTTCATCTTACAGGGATCAAGACGCTTCT
TCCTGGCTTTCCGAAATGTTGGATGCCCAAAGAAAAGGTAAAGGAGCTGCTGCTGTTTCA
GAAAATTTTAAGGTCACGGCAACCCCTTGGGATTACACTCAGAGGGAATCCATTCATGCA
TCTACATTTTCAGAGCCAAACCAAACTTTTGAACCCAAAGGAGGTTCCTTCGATTTTTCT
TCTGGTACAGGATCTCATTCCTCAGGTGCCAAGAGAGCAGGTGAAAGAAGACGGTCGAAA
ACTGAGAAGAGTATCAGTTTACAGGTACTCAGGCAGTACTTTGCTGGGAGCCTCAAAGAT
GCTGCCAAAAGTATTGGAGTTTGCCCTACAACTTTGAAAAGAATATGCAGGCAACATGGA
ATCACCAGGTGGCCTTCTCGTAAGATCAAGAAAGTTGGCCACTCGTTACAGAAACTTCAA
CTTGTGATCGATTCAGTCCATGGTGCTGAGGGTGCAATTAAACTCAGTTCTTTCTACACC
AACTTCCCTGAACTTAACTCTCCAAATAATCCCGGCACGAGCAACTTCTCTGCTTCTAAA
AATGATGATCATCTGCAGCAAGTAAATACTCAACCTGATGGCAGCCCTGTGACTACCACA
TCCAAGTCAACTTCTTCGTCTGGCAGTCATAACTCCAGCTCAAGTTTATTCTGTTCCACT
GGTTCAAAGAATTGCACAACGGAGGAAAACCCTGGAGGAATGCCAAAGAGAGCACATACA
GAAACAGGATTGCATGATATGGGTCAAGAAGAAACCAAGCTTCTAGTCAGATCACAGAGT
CAAAAGATCCAAAGCAATCACAATTCTGTGGAACCTGTGTGTCCTTTGTCAACGAGTAGC
AATCAGGTCTTGGGTAGATTTAAAGTAAAAGCCATTTTTGGGAAGGAAAAAATCCGTTTC
AGCCTTCAATCACACTGGGGTTTTCGAGATGTTAAGCACGAAGTGATGAGGCGTTTCAAT
GTAGAAGATGTTGGTAAAATCGATCTAAAGTATTTGGATGATGATGACGAATGGGTACTT
CTGACATGTGATGCTGATCTTGAGGAATGTATTGATATACATAAATTCTCTAAAAGGAGA
ACAATTAAAGTTTCCCTCCACCATACCAATCTTGGAAGTTCATTTGGTAGCAGCGGTCCA
GCCTAA

Peptide Sequence

PEP ID

Solyc01g112190.3.1
PEP Infomation

Plant regulator RWP-RK family protein (AHRD V3.3 *** AT4G35270.4)
Sequence

MEDAAFTLLAKLHDDNNATDFTEFGFWLEATDQPSNSNSNYCTSNQMDSAPPTQSRRKLW
IGPNNPNPTSSIPPVNTRLVQAIEYLKNSTTHNKEVLIQIWVPVNRGGKHVLITNNQPYF
LNPNSHSLLQYRNVSQNYQFAADKDSNELVGLPGRVFLKKLPEWTPDVRFFKSEEYPRVN
YAHQHNVRGSIAVPVFETGSGTCLGVVEIVTTIQKTHYHLELEHVCKALEAVNLRSSGIS
SNPSKIKDQDCNESYLAALAEIQYILTCVCDTHKLPLAQTWAPCIQQGKGGCLQSDENFA
SCVSTVDSSCYVRDQHVVPFHLACSEHHLLKGEGVAGGAFNTNQPCFATDITAFSKAEYP
LSHHARMFGLCSAVAIRLRSIYTGSADFVLEFFLPLDCKNTEEQKIMLSSLSSVIQQSCR
SLRVVTDQELQEEKEVVRLPIGEEESRKPVSSSYRDQDASSWLSEMLDAQRKGKGAAAVS
ENFKVTATPWDYTQRESIHASTFSEPNQTFEPKGGSFDFSSGTGSHSSGAKRAGERRRSK
TEKSISLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKVGHSLQKLQ
LVIDSVHGAEGAIKLSSFYTNFPELNSPNNPGTSNFSASKNDDHLQQVNTQPDGSPVTTT
SKSTSSSGSHNSSSSLFCSTGSKNCTTEENPGGMPKRAHTETGLHDMGQEETKLLVRSQS
QKIQSNHNSVEPVCPLSTSSNQVLGRFKVKAIFGKEKIRFSLQSHWGFRDVKHEVMRRFN
VEDVGKIDLKYLDDDDEWVLLTCDADLEECIDIHKFSKRRTIKVSLHHTNLGSSFGSSGP
A*

Transcript Sequence

Transcript ID

Solyc01g112190.3.1
Transcript Infomation

Plant regulator RWP-RK family protein (AHRD V3.3 *** AT4G35270.4)
Sequence

TTCCACATATAGCAATACGCCTATCTCAAAACCAAATTCTTCTGAAATGCAACATTTGAT
TTTTTATCAGTAATAATATGGAAGATGCTGCCTTTACGCTCTTGGCTAAGCTCCATGACG
ACAATAATGCCACTGATTTTACTGAATTCGGATTCTGGCTAGAGGCAACTGATCAACCAT
CCAATTCCAATTCCAATTATTGTACTTCTAATCAAATGGATTCTGCACCACCTACCCAAT
CTCGGAGGAAGTTATGGATTGGACCAAACAACCCAAATCCTACTAGTAGTATACCACCAG
TAAACACCAGATTGGTGCAGGCCATTGAGTACCTAAAGAATTCAACAACCCATAATAAAG
AGGTCCTCATTCAGATATGGGTCCCTGTCAACAGAGGAGGTAAACATGTACTTATTACTA
ATAATCAACCATACTTCCTCAACCCAAACTCCCACAGCCTATTACAGTACAGAAATGTCT
CTCAAAATTACCAATTTGCTGCTGACAAGGATTCGAACGAGTTGGTTGGCTTGCCTGGAC
GCGTCTTCTTGAAAAAGCTGCCCGAGTGGACTCCTGATGTTCGTTTTTTCAAAAGCGAGG
AGTATCCGCGAGTTAATTATGCTCATCAGCATAACGTTAGGGGATCCATTGCTGTTCCTG
TTTTTGAAACTGGCAGTGGAACTTGCTTGGGTGTGGTTGAGATTGTAACAACTATTCAGA
AAACTCACTATCACCTGGAGCTTGAACATGTCTGCAAAGCTCTTGAGGCTGTTAATCTAA
GAAGTTCTGGTATCTCATCAAATCCTTCCAAAATCAAGGATCAGGATTGCAATGAATCTT
ACCTAGCTGCATTGGCCGAGATTCAATATATTTTGACATGTGTGTGTGATACACACAAGT
TGCCATTGGCTCAGACTTGGGCCCCATGCATACAACAAGGTAAAGGTGGGTGCCTGCAAT
CTGATGAGAACTTTGCTTCTTGTGTTTCGACAGTCGACTCATCTTGCTATGTGCGCGATC
AACATGTGGTGCCTTTTCATTTAGCATGTTCTGAGCATCACTTGCTTAAAGGTGAAGGAG
TTGCAGGTGGAGCATTCAATACAAACCAGCCATGTTTTGCTACGGATATTACGGCCTTTA
GCAAGGCAGAATATCCATTGTCACACCACGCCAGGATGTTTGGATTATGTTCTGCTGTAG
CAATACGCCTTCGAAGTATATATACAGGCTCCGCTGACTTTGTCTTGGAGTTTTTCTTGC
CACTTGATTGCAAGAATACTGAAGAACAAAAAATAATGCTAAGTTCACTGTCTTCTGTGA
TACAACAAAGTTGCCGAAGCTTACGTGTTGTCACGGATCAAGAATTACAGGAGGAAAAAG
AAGTTGTACGCCTTCCCATTGGTGAAGAAGAATCAAGAAAACCAGTCTCTTCATCTTACA
GGGATCAAGACGCTTCTTCCTGGCTTTCCGAAATGTTGGATGCCCAAAGAAAAGGTAAAG
GAGCTGCTGCTGTTTCAGAAAATTTTAAGGTCACGGCAACCCCTTGGGATTACACTCAGA
GGGAATCCATTCATGCATCTACATTTTCAGAGCCAAACCAAACTTTTGAACCCAAAGGAG
GTTCCTTCGATTTTTCTTCTGGTACAGGATCTCATTCCTCAGGTGCCAAGAGAGCAGGTG
AAAGAAGACGGTCGAAAACTGAGAAGAGTATCAGTTTACAGGTACTCAGGCAGTACTTTG
CTGGGAGCCTCAAAGATGCTGCCAAAAGTATTGGAGTTTGCCCTACAACTTTGAAAAGAA
TATGCAGGCAACATGGAATCACCAGGTGGCCTTCTCGTAAGATCAAGAAAGTTGGCCACT
CGTTACAGAAACTTCAACTTGTGATCGATTCAGTCCATGGTGCTGAGGGTGCAATTAAAC
TCAGTTCTTTCTACACCAACTTCCCTGAACTTAACTCTCCAAATAATCCCGGCACGAGCA
ACTTCTCTGCTTCTAAAAATGATGATCATCTGCAGCAAGTAAATACTCAACCTGATGGCA
GCCCTGTGACTACCACATCCAAGTCAACTTCTTCGTCTGGCAGTCATAACTCCAGCTCAA
GTTTATTCTGTTCCACTGGTTCAAAGAATTGCACAACGGAGGAAAACCCTGGAGGAATGC
CAAAGAGAGCACATACAGAAACAGGATTGCATGATATGGGTCAAGAAGAAACCAAGCTTC
TAGTCAGATCACAGAGTCAAAAGATCCAAAGCAATCACAATTCTGTGGAACCTGTGTGTC
CTTTGTCAACGAGTAGCAATCAGGTCTTGGGTAGATTTAAAGTAAAAGCCATTTTTGGGA
AGGAAAAAATCCGTTTCAGCCTTCAATCACACTGGGGTTTTCGAGATGTTAAGCACGAAG
TGATGAGGCGTTTCAATGTAGAAGATGTTGGTAAAATCGATCTAAAGTATTTGGATGATG
ATGACGAATGGGTACTTCTGACATGTGATGCTGATCTTGAGGAATGTATTGATATACATA
AATTCTCTAAAAGGAGAACAATTAAAGTTTCCCTCCACCATACCAATCTTGGAAGTTCAT
TTGGTAGCAGCGGTCCAGCCTAAGCAAACAATATTTGCTTTACAAGTGTTTCCAGATTTG
GGGTATATGGAGGATTATTGCCAGTTGCATGCATGTAAGTAGAAAGAAGGGCTTATTTCA
CTTTCTTTTTTAGTGTTAATAGTTGATGCGGGAAGATGGTCAATCCGCCACCCTACTAGC
TATATGACATTCTTGCTTGCTGATTGCACACTGCATACCCATTGTATCCTCTTTTTTTTT
TTTTTATATATATATCAATCAATGGGAATGTAATATAATAGAACATACAATTAAGAATCA
AGTGAGGTTGACGTTGAGTCATGCTGATTGGGGCACTTTTGCATGGTTCCAGGTGGAATA
GTCTGCCATTTCACATTCAATGAGCTGCAGAGGATACCAGCATAAACGTTTTGGATAATG
TTTTTCAGTGTCTAATTTTCTATGTTCCAACCTTGTGTATTTAGTTCCAGGAGACTAGAC
AAACTGATTTAATAGATTTGTGTATCTTTCTTATTT