Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g111920.3.1
CDS Infomation

F-box protein SKIP23 (AHRD V3.3 *** W9RTM3_9ROSA)
Sequence

ATGGCCGAATGGTCTCAACTTCCCAGAGAACTCGTTGAACTCATTTCCAAACACCTTTCC
ACCGAAACTGATTTCCTCCGTTTCCGTTCCGTTTGCTCATCATGGCGTTCCTCTCTTCCT
CCTAAACCCTACCCGTCTTCCCTTTCCCGTTTTCCCATTCTCCCCAATGACGGCATCGCT
GAAAATAGCTGGGGTTTTAAACTCTCCAAATCACCCCTCTACCTTATCCATCCACCTAAT
CAAACTAATAACCATGGATGGATCATCAAGCTCGATCGCGAAAATCCACAGAGGATGCGT
TTATTCAATCCTCTTTCCAGATCCCAATGCAAACCCCTTCCTCCTGATTTCCCCAAGATT
TTGGATTCCTCGCAATACCCAATTCGCGAATTGTGCCATGAGTATACTCTTCAGTTTATA
AAGTACCGACCCAGGGCTAGTTCCATTGCCGATGCTGGGAATCTCTACATGGAAAAAGTC
GCTGTGCGTATGGAAAAGAATGGGTTTGTGCTATTGACAATTCATGTTTCTGGGAAATTG
GTGATGTTTAGATCTGGTGATACCAAGTGGTCTATTGTTGATGAGTCATCTTTGCCTTAC
GATGATGTCATTATGAAAGATGAGAACTTTTATGCTGTTGATAATACTGGTAAGGGAGTG
CTTGTTAAATTGAACCCTGGGACAGCGCCAGAATTACAAGTTGTTGCTCATTCTGTGTTT
GGGGGAGATAAAAAGTTCCTTGTGGAGTCTTGTGGTGACCTTTTAATGGTTGACAAGTAT
TTGAGTATTGGGCCTGAAGATGATCTTGGATACAATGAGACTGTTGAGTTTTACGAGGAA
TTTGATTGCTACATGAGCGAAAGGACGGTTAAGTTCAAAGTTTATAAGTTGGATGGAGAT
ATGCAGAGGTGGGTTGAGGTCAATTGTTTGGAAGATAGGATGTTGTTTGTGGGGGATAAT
TGTACATTTTCTGCTTTGGTCTCCGAGCTTGATTCTGGGTGTAAAGGGAACTGTATACTC
TTCTCGGATCTGTTTTTCTGCAGCACCGAGGATGATGGAGGATTCTGGAAGCATCACGGC
ATTGGTGTGTTTAGTTTGGAAAATGGCAGCATTTGTCCTATAAATTGTTGCCGTGGCTAT
GCCGAGTTGTTTTGGCCTCCTCCTCCTTGGATTTGTTCTCCTCCAACTATTGATGCTGAG
CTGAATGAGCTGAAAATCTAA

Peptide Sequence

PEP ID

Solyc01g111920.3.1
PEP Infomation

F-box protein SKIP23 (AHRD V3.3 *** W9RTM3_9ROSA)
Sequence

MAEWSQLPRELVELISKHLSTETDFLRFRSVCSSWRSSLPPKPYPSSLSRFPILPNDGIA
ENSWGFKLSKSPLYLIHPPNQTNNHGWIIKLDRENPQRMRLFNPLSRSQCKPLPPDFPKI
LDSSQYPIRELCHEYTLQFIKYRPRASSIADAGNLYMEKVAVRMEKNGFVLLTIHVSGKL
VMFRSGDTKWSIVDESSLPYDDVIMKDENFYAVDNTGKGVLVKLNPGTAPELQVVAHSVF
GGDKKFLVESCGDLLMVDKYLSIGPEDDLGYNETVEFYEEFDCYMSERTVKFKVYKLDGD
MQRWVEVNCLEDRMLFVGDNCTFSALVSELDSGCKGNCILFSDLFFCSTEDDGGFWKHHG
IGVFSLENGSICPINCCRGYAELFWPPPPWICSPPTIDAELNELKI*

Transcript Sequence

Transcript ID

Solyc01g111920.3.1
Transcript Infomation

F-box protein SKIP23 (AHRD V3.3 *** W9RTM3_9ROSA)
Sequence

CTTTTACGTGAAACCTAAATTTTACGTTTGAAATGAAATATATTGTGTGTCTCACTCTTA
AAAGCTTATGGTAAGGAGATTTTTAGGAGGAAAAGAACCCGCAATGGTTGACCCGTATAC
CGGCCCAAAAGAAGCTTGAACATCTGGTCCAGGTGTCAATGGCAGAAGCTATTTCCGGGA
AGCATCTGCTGTGATTTGCACTGCACTCAAAATTATATATGTATAAATCTCTCATCACCA
TTCAAGAATCCATCATCAATCTACGGTTACTGTAACAGTAATGGCCGAATGGTCTCAACT
TCCCAGAGAACTCGTTGAACTCATTTCCAAACACCTTTCCACCGAAACTGATTTCCTCCG
TTTCCGTTCCGTTTGCTCATCATGGCGTTCCTCTCTTCCTCCTAAACCCTACCCGTCTTC
CCTTTCCCGTTTTCCCATTCTCCCCAATGACGGCATCGCTGAAAATAGCTGGGGTTTTAA
ACTCTCCAAATCACCCCTCTACCTTATCCATCCACCTAATCAAACTAATAACCATGGATG
GATCATCAAGCTCGATCGCGAAAATCCACAGAGGATGCGTTTATTCAATCCTCTTTCCAG
ATCCCAATGCAAACCCCTTCCTCCTGATTTCCCCAAGATTTTGGATTCCTCGCAATACCC
AATTCGCGAATTGTGCCATGAGTATACTCTTCAGTTTATAAAGTACCGACCCAGGGCTAG
TTCCATTGCCGATGCTGGGAATCTCTACATGGAAAAAGTCGCTGTGCGTATGGAAAAGAA
TGGGTTTGTGCTATTGACAATTCATGTTTCTGGGAAATTGGTGATGTTTAGATCTGGTGA
TACCAAGTGGTCTATTGTTGATGAGTCATCTTTGCCTTACGATGATGTCATTATGAAAGA
TGAGAACTTTTATGCTGTTGATAATACTGGTAAGGGAGTGCTTGTTAAATTGAACCCTGG
GACAGCGCCAGAATTACAAGTTGTTGCTCATTCTGTGTTTGGGGGAGATAAAAAGTTCCT
TGTGGAGTCTTGTGGTGACCTTTTAATGGTTGACAAGTATTTGAGTATTGGGCCTGAAGA
TGATCTTGGATACAATGAGACTGTTGAGTTTTACGAGGAATTTGATTGCTACATGAGCGA
AAGGACGGTTAAGTTCAAAGTTTATAAGTTGGATGGAGATATGCAGAGGTGGGTTGAGGT
CAATTGTTTGGAAGATAGGATGTTGTTTGTGGGGGATAATTGTACATTTTCTGCTTTGGT
CTCCGAGCTTGATTCTGGGTGTAAAGGGAACTGTATACTCTTCTCGGATCTGTTTTTCTG
CAGCACCGAGGATGATGGAGGATTCTGGAAGCATCACGGCATTGGTGTGTTTAGTTTGGA
AAATGGCAGCATTTGTCCTATAAATTGTTGCCGTGGCTATGCCGAGTTGTTTTGGCCTCC
TCCTCCTTGGATTTGTTCTCCTCCAACTATTGATGCTGAGCTGAATGAGCTGAAAATCTA
ATTCTCTTGGAACTTGACGGGGAATAAAAAGAAACTAGCTAGCCAGAGCTGATCATATGC
TGGACTTCTTTAAACTGTACATATGGTTTTCTTCGGAAATTGACATTTCGCTCAAGGTTT
AAGTCCTTATGTGGCATTGACTGGCACAAATAAATGAACAAGTTGTTAAAACTATTTTCA
TTGACAGTATTATGGTAAAGAAACAAGGATCTTCATGTGTTCGTTTCTTTACTAAATGTG
GTTCACATAAATTTCACCTTTCTTATTTTAAGAACAGTTGCAGCTAACCAGCAGCAACAT
ATGATTACCAGTCATTCAATGGAGAATTATTTGAGCACTTATTTAGTTACATTGAGTTGT
TATGCATATTTGTGTGGAGGAGGGCAAGATGGTCTGGACAGCACCTCTTGAAACACGAAG
GAAATTTAATTTACATTTCCTCTTGTAGAGTACTATTGGCTTCTATTTCAAGAACAACAC
AAGAATGAAATCATCTTCGACATCTTAAACTACGAAGAGATTGAAATTATATGATTGGAA
GCTTTGGATGCCCTATTTCTGATGGAATATTCTATCTTCTGCCGTGGATACTGCATAACC
CGCCTACATATTCCCAATCCACGAAACCTTCACTTTAGACTTAGTTCTCTCTATCCAAGC
TTGAAGTTGCACACCCTTCATAAAAAAACATCACTATCAGTAACTCGGTTTTCATGTTGG
ATTTGCTTATTGCTCGCGAGCTGTTGAGGGGTAAAACAATGATGGGAATAGGTACAGGAA
GAGATGTCAGTTTGAGGAAGACCAGGGAAGCGAAGCCTGAGACTATGCAAGAGAGTTTCT
GCTCGTTCTGCCAGATATTGATTCTTACCACCATCTGCAACAAGGCCCTTGACCTTCCCT
CCCCATGACTTGCCTTTAGATTTTCTTTTATGTGGATGTTTCTTCTGGTCCTTCAGTCTC
CAAACATGCACAGCAGCCTCAATTCTATTTGCAACTTCCAGCGTATGGTGCTCTGATGAC
AAGTCCAGGCAATCAAGAAGACATTCAGGTGAGAAATTGTCAGCAGTGATGTAACGATAG
ATGATATCACCTAGACATGCTTTTCCACTCTGCAATAAGAAATTAAGAAACAATTCAAGA
AATGAACAGTTGCAATTGACAAGTAAACAGCATTTCTTTTCATCAAACAAGTACTCTAAA
ATTGTCCTTGGGAGGATATCAGAATACCCATACGAGGATAACAAATATGGAATGCGGGGA
AAAAGGGAACAAAGTCTCTGAAATTTAAGTTTACGGATTATTTATCTAATAAGGAAACTT
TACTTTGTTTTCTCTTACCATATTTTCTTATCAAAAACATAAATGTTGAGCTAGCCACTT
ACATTAGACAACTGTAGCATACTTCATCTCATTTTGTGCAAGTGAACTAAATAAGAGATA
CAGCAACATTAACCATTGGTGCAATGAAGAAGGCAAGGAAAACAAAGGAAGTCAAGATAT
AGAATTATTTAAAGAACCTGACATAGGCTGCAGATGGCAGCTCAGTTTTTTTGGACAAAA
AACTCTCACTAAATATAACTATAACTTCTACTTTAAGTAAACTCAACAGGATGCAAACCT
TGGGCAAAGTTTCAATATAGGCACTTGGAGTCTCCACTTCAGCGAGCACATTACTGTTGA
TTGCCAAGGCTGCCTTCAGTATCTGGTTAGTGCAATCCCTACACTGTTGCACTCTCTTCC
TAGCTTCTTCAGACAACCCTTTTGGGGGGACTTTAGGGCAAGGCAACCACCATTTCTCTT
CCTGTCGAACTGAGGGCCTACCAAACCCTATTCCAGGAGGAAAAGAGTCACAGTCATCTC
CTTCAGCTAAAACTATCCCTCGATCCACATACCAAAACTCTGTGTCACGAAATCCATCGA
GAATGCTAATCAACATAGCATCAAGTTTCTTTAGAGCAGGCAGGTTCAAGTATAAATCAG
AACGTGGTCTTGTTGCCATTACTTCATATGTGCCTCCTCCAGGGAATTGTTGAATGGAAG
GCACAAGCTCCACAATAGAGTCACTAACACATAGCAGCCACTC