Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g111700.2.1
CDS Infomation

26S proteasome non-ATPase regulatory subunit 3 (AHRD V3.3 *** G7J5U6_MEDTR)
Sequence

ATGGCCTTTTTAATTGTTATAGTATCTGTTTTCTATATTGCAATGGTTGTTGTATGGGTT
TCTCAGGTTCTCTTTAAAATGGACGATCAAGAGGTTAAGGTTCAACATCAATCACCTCCT
TCTGTTTATGACTGCTCAGTTGATCCTTCTGTTTTGCAAGATTTGAAGGAAGTTGCCTCA
CTGATTGAGGGTGGAGCATATACAAGTGAAGTGCAGAAGATATACAGGGCTATGAGATTG
ACCATGAAACTCAGGAGCAAACTAAAGGCTTCAGTACTTTCTGCTTTCCTAAATTATGTT
CTCATCTCTGGTTCTGAGTTCCATAAGCGGCTATCTTCATACCTGCCTCGGGATAGGCAT
GACAGCCAATGTGATGTGGGAACGCCTGCAACAGAATCCAAACATCTGTTGCCTGAACTC
GAGATGTTCTGCTACTTGCTTGTTCTAATATTTCTGATTGATCAAAAGAAATACAACGAG
GCTAAGGCTTGTTCCTCAGAAAGCATTGTTCTTCTAAAAAGCAAGAATAGTATAACTGCT
GATGTTCTTGCATCAAGACTCTACTTCTACTACTCTTTAAGTTTTGAGCTTGCTGGTGAT
CTTGCTGAAATCCGAGGTAACTTGCTTGCTCTATACCGGAGTGCCACAATACACCATAAT
AAGTTCAGTCAGGAAACACTTCTTAATCTGTTACTACGAAATTACCTTCACTACAACTTG
TATGATCAAGCAGAAAAAATTCGTTCAAAGGCCCACCGTTTTGAAGCTCTTTCTAACCAA
CAGTTTTGCAGATACCTCTTCTACCAGGGAAAGATAAAGACAATTCAGTTGGAGTATACA
GATGCCAAAGATTGTCTTCTTCAAGCTGCTCAGAAAGGTCCAACTACTGCTGTTGGTTTC
AAAATACAATGCAATAAGTGGGCTGTTATAGTCCATTTATTGCTTGGAGAGATCCCTGAG
AGGACTATTTTTACACAGAAAAGAATGGAAAAAGCATTGAGACCATACTTTGTGCTGACA
AATGCTTTTCGTGTTGGAGATCTAGAGTTATTTAGAACAGTAGCTGAGAAATTTTCCAGC
ACATTCAGCCAAGACAAAACAAGTAACTTGATTAACAGAGTCAGGCATAATGTCATAAGG
ACAGGGATCAAGAACGTCAGTGTCTCATACACTCGCATTTCACTGGCTGACATTGCCAAG
AAACTAAACTTGGATCTTGAAAATCCAATTGGTGATGCTGAGAACATTGTAGCCAAAGCA
ATTAGAGATGGTGCAATTGATGCCACATTGGACCATGCCAATGGATGGTTGGTATCAAAA
GCAACTGAAGATGTTTACTCCACAAATGAGCCTCAAATTGCTTTTGACTCGAGAATAAAC
TTCTGTCTCAGTATGCACAATGAGGCTCTCCGTGCTCTAAGATTTCCACAGGGTTTGATA
AATAAAGTTGTGTAG

Peptide Sequence

PEP ID

Solyc01g111700.2.1
PEP Infomation

26S proteasome non-ATPase regulatory subunit 3 (AHRD V3.3 *** G7J5U6_MEDTR)
Sequence

MAFLIVIVSVFYIAMVVVWVSQVLFKMDDQEVKVQHQSPPSVYDCSVDPSVLQDLKEVAS
LIEGGAYTSEVQKIYRAMRLTMKLRSKLKASVLSAFLNYVLISGSEFHKRLSSYLPRDRH
DSQCDVGTPATESKHLLPELEMFCYLLVLIFLIDQKKYNEAKACSSESIVLLKSKNSITA
DVLASRLYFYYSLSFELAGDLAEIRGNLLALYRSATIHHNKFSQETLLNLLLRNYLHYNL
YDQAEKIRSKAHRFEALSNQQFCRYLFYQGKIKTIQLEYTDAKDCLLQAAQKGPTTAVGF
KIQCNKWAVIVHLLLGEIPERTIFTQKRMEKALRPYFVLTNAFRVGDLELFRTVAEKFSS
TFSQDKTSNLINRVRHNVIRTGIKNVSVSYTRISLADIAKKLNLDLENPIGDAENIVAKA
IRDGAIDATLDHANGWLVSKATEDVYSTNEPQIAFDSRINFCLSMHNEALRALRFPQGLI
NKVV*

Transcript Sequence

Transcript ID

Solyc01g111700.2.1
Transcript Infomation

26S proteasome non-ATPase regulatory subunit 3 (AHRD V3.3 *** G7J5U6_MEDTR)
Sequence

ATGTGATTGATTTTCAATAGAGTGGCTAGAAGTTTCGTCTTTACTCTAGACAGAATGAAT
TTCTTCTTCATGTCTGTCAAATAGGATGGTGGATGGAAGTCGACTAATCATTCTACTTCA
AAAAGAACATTAGATTTTGTTGGGAGGTAGCATAATTGGATATTAAATTATTATCTTTGT
TTTTGTAAAATATGTAAAAAAAGAAAGCTAAGAGTCACCATTTTTCTAGTTAGAAAATTG
AAATCAAGTGTGGAACTTGATTGATAATAATAATACTGTCTTGTTTTTGTTTTATACAAA
AGATAATGAAGCCATGCGTTTGTTTCATTGCTTGGCCTAAAGGGAAAGCGATTTCTTAAT
TCTCAATCAACGAATTTCAAACTCAGCTCTTCTCATTGTTTATGGACAAATATTCTCTTA
TACTTTGCAGCCAACCCAAGCCATGATAAGTTCAGTTACCGAAACAATTAAATGTCAATC
AGAAACTAACAACAAATCAAATAAGTACACAGTACCTCGACAATAAATAATTTTACAAAA
TTCACTATCTCAATTCATAGGAGTCCATAACATGTTAACACACAATTAAAGAAGATTTAT
ACTTTCCTTTTCAGGAGGAGCATAAAAATTAGTAAATGTGATGTGCTTTTCTTTTTGCTT
TTTCCATTTAATAATTATATGTAAGTTCAGTAACTACTTTCTCTCTCTATATAAGCTTAG
TTTGCTTTTCAGTATCTGACAACTTCAACAATGGCCTTTTTAATTGTTATAGTATCTGTT
TTCTATATTGCAATGGTTGTTGTATGGGTTTCTCAGGTTCTCTTTAAAATGGACGATCAA
GAGGTTAAGGTTCAACATCAATCACCTCCTTCTGTTTATGACTGCTCAGTTGATCCTTCT
GTTTTGCAAGATTTGAAGGAAGTTGCCTCACTGATTGAGGGTGGAGCATATACAAGTGAA
GTGCAGAAGATATACAGGGCTATGAGATTGACCATGAAACTCAGGAGCAAACTAAAGGCT
TCAGTACTTTCTGCTTTCCTAAATTATGTTCTCATCTCTGGTTCTGAGTTCCATAAGCGG
CTATCTTCATACCTGCCTCGGGATAGGCATGACAGCCAATGTGATGTGGGAACGCCTGCA
ACAGAATCCAAACATCTGTTGCCTGAACTCGAGATGTTCTGCTACTTGCTTGTTCTAATA
TTTCTGATTGATCAAAAGAAATACAACGAGGCTAAGGCTTGTTCCTCAGAAAGCATTGTT
CTTCTAAAAAGCAAGAATAGTATAACTGCTGATGTTCTTGCATCAAGACTCTACTTCTAC
TACTCTTTAAGTTTTGAGCTTGCTGGTGATCTTGCTGAAATCCGAGGTAACTTGCTTGCT
CTATACCGGAGTGCCACAATACACCATAATAAGTTCAGTCAGGAAACACTTCTTAATCTG
TTACTACGAAATTACCTTCACTACAACTTGTATGATCAAGCAGAAAAAATTCGTTCAAAG
GCCCACCGTTTTGAAGCTCTTTCTAACCAACAGTTTTGCAGATACCTCTTCTACCAGGGA
AAGATAAAGACAATTCAGTTGGAGTATACAGATGCCAAAGATTGTCTTCTTCAAGCTGCT
CAGAAAGGTCCAACTACTGCTGTTGGTTTCAAAATACAATGCAATAAGTGGGCTGTTATA
GTCCATTTATTGCTTGGAGAGATCCCTGAGAGGACTATTTTTACACAGAAAAGAATGGAA
AAAGCATTGAGACCATACTTTGTGCTGACAAATGCTTTTCGTGTTGGAGATCTAGAGTTA
TTTAGAACAGTAGCTGAGAAATTTTCCAGCACATTCAGCCAAGACAAAACAAGTAACTTG
ATTAACAGAGTCAGGCATAATGTCATAAGGACAGGGATCAAGAACGTCAGTGTCTCATAC
ACTCGCATTTCACTGGCTGACATTGCCAAGAAACTAAACTTGGATCTTGAAAATCCAATT
GGTGATGCTGAGAACATTGTAGCCAAAGCAATTAGAGATGGTGCAATTGATGCCACATTG
GACCATGCCAATGGATGGTTGGTATCAAAAGCAACTGAAGATGTTTACTCCACAAATGAG
CCTCAAATTGCTTTTGACTCGAGAATAAACTTCTGTCTCAGTATGCACAATGAGGCTCTC
CGTGCTCTAAGATTTCCACAGGGTTTGATAAATAAAGTTGTGTAGCAACGTAAACAAAGC
TTTTAACAGAATCAAAATCTTATAAAATTATCATTTGGATTAGGGATGCCCTTATACACT
GACAATGTATAGAATTTTATAGGTTGTCAATCCACGTTCTAGGTTATCATGAAAAGAATA
TATTCTCTAATCATTTTAAATTTCAAGTATACTACCAATTAACAATATTTCTTTAATTTC
TCGAGACATTCATAAAGTCTTTTTTCCACTAGTATAATCTCATTTCTGTTGAGATGAAGA
AAAAATGGAAGAATTAGAGAAGAATATGATACTGCTAAAGTGCTAGTATCAAATGTTCTA
TGATGCAGAGCAAAATATTAACTGTTTATGGTGGCTCTATGAGAGTTTCGTTTACTTGAA
CAAATGCAACAGTCACGCAAAGTACATAAGACTCAAACTGAAACCAGTAATTATCTATTC
CACAGTGTGTTCAGTAAATCTTAAAATCAATGAAATAAAATACACAGAAAGTACTTGTCT
GTTTTGGTTACTGTCATGTGAGGTAGCAAATTTGACAAATACCCTTCAAGCTAGTTTGCA
AAAATAAGCTCTTCATCCTTCCTTTGTTCATCAGCTTGGGAGAGAAGTCACTGGAGTGGC
TTGCAAAATGACTTCAAGAGCAGTCATTCAACTACCTGAACTCAAACCAAAAGACTTGAC
GATAGTGCTAACCCTTTCAGCAAAAGTTCTGGATGTTATCTTCTTGCCAGG