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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g110820.3.1
CDS Infomation

RNA binding protein, putative (AHRD V3.3 *** B9SHJ5_RICCO)
Sequence

ATGGATTGCATGACCGGAAATCCTGTTCGTCAGCATTGGGCGATGGAGGAAGTTAAAGAG
TGTACCCTCTTGATTCGGCATCTTCCAGAAGCAATTCCTCATGAAACCCTTTCAAGATTG
CTTTCCAATTATGGTGCAACTTCTATCCGTCCTTGTACTACTGCAAGAATGAGGAATTGT
GCTTTCGTGGATTTCAAGGATGAAGGTCTGGCACACCAAGCACAGCAACATTTGAATGGG
GTACGGTTTCTTGGTAAAACCCTAGTGGTCGAACGAGCTAGTAGAAGCACAGATAGACAA
AGCGAACATCGGATTGGAGATGGCTCGGTCTCTTCGATCAAAGATGCTGCTGCCAAAGAA
TTTGGTGGAGTATCTAGGGAAGGTCCTTATCCTGGCAGCAACCCCATTGCTGAAAGACTG
GGGGTAGATTATCCATTTCCTCCTCACCTCGAATATGTTTACCCTCCACCTGATGGACAT
ATACTTACAAATATTGTAAATGCTCTTATTGCTGTTCCTCGGTTCTACACTCAGGTCTTG
CACTTGATGAACAAGATGAATATTCCGGCACCATTTCGTATGGCTTTGCCAACTCCACCT
CTACCAACCTCTCTGTCTGTTCCTCCTCCACCCCCTCCACCCCCTGCTCCAATAGTCTCT
AAGAGTAGAATGGAAGATCTATCAAGCAGTGAATCAGAAATGGAGTCTTCAGATGAGGAA
GCTACAATTGTTGGTGGGCCTAAAAAGAAGCGTATTAGACATGAAGCTATCTTGGGCCCT
GCAGTTGACAAGGATGTTGGCCATGAGGCTGTTGGATTAAGAGCTGCTGCTTTGGTTCCT
AAAGAGATGCCAGTAGTAAAGAAGAAGAACCCAATAATTCAGATTAAAGTAACACCTAAA
CAGGTACAGAATGAAGAGAAGGGTGATGCAAGTGCACTGTCATTGACACTGGAAGAAAAA
GAGAATGATCATAAACCTTTTACGACCCTTGAAGAATTAAAAAGTGGAAGATTGCCCCCA
GAAGAGATTCTGTCGCTTCCTATGTTTAAGAATTATTGTGCCGGAAATCCTTCTCAGATC
TTATACTTGAAGAACTTAGCAAAAGAAGTCATTGTTGATGACATTTACTTCATATTTGGA
TCCTTATTTGTGAGCATTGATGAAGCTAAATCCAGTCTTGCAGTGAAGTTAATGCAGGAA
GGGAGAATGCGTGGACAAGCTTTTGTTACATTTCCCTCCATTGAACTTGCTCAAAATGCC
CTGAATCTGGTGAACGGGTATGTGTTTAAAGGCAAGCCTGTCGTCATTCAGTTTGGCCGT
GATCCTGCTAAAGCAAAAACAAGCTAG

Peptide Sequence

PEP ID

Solyc01g110820.3.1
PEP Infomation

RNA binding protein, putative (AHRD V3.3 *** B9SHJ5_RICCO)
Sequence

MDCMTGNPVRQHWAMEEVKECTLLIRHLPEAIPHETLSRLLSNYGATSIRPCTTARMRNC
AFVDFKDEGLAHQAQQHLNGVRFLGKTLVVERASRSTDRQSEHRIGDGSVSSIKDAAAKE
FGGVSREGPYPGSNPIAERLGVDYPFPPHLEYVYPPPDGHILTNIVNALIAVPRFYTQVL
HLMNKMNIPAPFRMALPTPPLPTSLSVPPPPPPPPAPIVSKSRMEDLSSSESEMESSDEE
ATIVGGPKKKRIRHEAILGPAVDKDVGHEAVGLRAAALVPKEMPVVKKKNPIIQIKVTPK
QVQNEEKGDASALSLTLEEKENDHKPFTTLEELKSGRLPPEEILSLPMFKNYCAGNPSQI
LYLKNLAKEVIVDDIYFIFGSLFVSIDEAKSSLAVKLMQEGRMRGQAFVTFPSIELAQNA
LNLVNGYVFKGKPVVIQFGRDPAKAKTS*

Transcript Sequence

Transcript ID

Solyc01g110820.3.1
Transcript Infomation

RNA binding protein, putative (AHRD V3.3 *** B9SHJ5_RICCO)
Sequence

ATCTATTTTCAACTGACTAGGATTTGGAAAACTAATTTAGGGGTTTTAGGTATCGAAGCA
TTTTTTTTTATATTTCGGTGTATTTTGCTCTCCAGGTGGGTTCACTCACTTTTGTAGGTC
AGATTCTCAATTTGGAGCAAAATTCTACAGTAGAAGGAACTCTAATGGATTGCATGACCG
GAAATCCTGTTCGTCAGCATTGGGCGATGGAGGAAGTTAAAGAGTGTACCCTCTTGATTC
GGCATCTTCCAGAAGCAATTCCTCATGAAACCCTTTCAAGATTGCTTTCCAATTATGGTG
CAACTTCTATCCGTCCTTGTACTACTGCAAGAATGAGGAATTGTGCTTTCGTGGATTTCA
AGGATGAAGGTCTGGCACACCAAGCACAGCAACATTTGAATGGGGTACGGTTTCTTGGTA
AAACCCTAGTGGTCGAACGAGCTAGTAGAAGCACAGATAGACAAAGCGAACATCGGATTG
GAGATGGCTCGGTCTCTTCGATCAAAGATGCTGCTGCCAAAGAATTTGGTGGAGTATCTA
GGGAAGGTCCTTATCCTGGCAGCAACCCCATTGCTGAAAGACTGGGGGTAGATTATCCAT
TTCCTCCTCACCTCGAATATGTTTACCCTCCACCTGATGGACATATACTTACAAATATTG
TAAATGCTCTTATTGCTGTTCCTCGGTTCTACACTCAGGTCTTGCACTTGATGAACAAGA
TGAATATTCCGGCACCATTTCGTATGGCTTTGCCAACTCCACCTCTACCAACCTCTCTGT
CTGTTCCTCCTCCACCCCCTCCACCCCCTGCTCCAATAGTCTCTAAGAGTAGAATGGAAG
ATCTATCAAGCAGTGAATCAGAAATGGAGTCTTCAGATGAGGAAGCTACAATTGTTGGTG
GGCCTAAAAAGAAGCGTATTAGACATGAAGCTATCTTGGGCCCTGCAGTTGACAAGGATG
TTGGCCATGAGGCTGTTGGATTAAGAGCTGCTGCTTTGGTTCCTAAAGAGATGCCAGTAG
TAAAGAAGAAGAACCCAATAATTCAGATTAAAGTAACACCTAAACAGGTACAGAATGAAG
AGAAGGGTGATGCAAGTGCACTGTCATTGACACTGGAAGAAAAAGAGAATGATCATAAAC
CTTTTACGACCCTTGAAGAATTAAAAAGTGGAAGATTGCCCCCAGAAGAGATTCTGTCGC
TTCCTATGTTTAAGAATTATTGTGCCGGAAATCCTTCTCAGATCTTATACTTGAAGAACT
TAGCAAAAGAAGTCATTGTTGATGACATTTACTTCATATTTGGATCCTTATTTGTGAGCA
TTGATGAAGCTAAATCCAGTCTTGCAGTGAAGTTAATGCAGGAAGGGAGAATGCGTGGAC
AAGCTTTTGTTACATTTCCCTCCATTGAACTTGCTCAAAATGCCCTGAATCTGGTGAACG
GGTATGTGTTTAAAGGCAAGCCTGTCGTCATTCAGTTTGGCCGTGATCCTGCTAAAGCAA
AAACAAGCTAG