Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g110340.3.1
CDS Infomation

Endoglucanase (AHRD V3.3 *** M0ZU30_SOLTU)
Sequence

ATGAAGAGAAATATAATTTCTTCAAAATTAATGCTGCTTCTTCTCCTTCTTCTTCCATTA
TTAAACTGCCATGGAAGCTACCTTGATTATACAGAAGCATTAACCAAATCCATTCTCTTC
TTCGAAGGCCAACGCTCCGGCTATTTACCGCAGGACCAGAGAATGAGCTGGCGAGGACAT
TCCGGTTTAAGCGATGGATGGGAGATGAATGTTGATTTGACCGGCGGTTACTACGACGCC
GGAGATAATGTGAAGTTTAATTTTCCGATGGCGTTTACGACGACGTTGCTTGCGTGGAGT
GTAATTGAATTTGGGGAAATTATGCCGCCTGCTGAATTACGGAATGGTTTAGTCGCTATC
CGTTGGTCCACTGATTATCTTCTCAAAACTGTTTCTCAGCCAGATCGCATTTTCGTCCAG
GTGGGTGATCCTGTACTGGACCATGACTGTTGGGAAAGGCCAGAAGATATGGACACTGCT
AGGACAGTGTACACAGTGGATGCCCCGAATCCGGCATCTGATGTGGCCGGAGAGACTGCA
GCTGCCCTGGCAGCTGCATCTATAGCTTTCCGGCCCTCAGATCCCGGATACGCAGAGACA
CTTTTGAGAACATCCACAAGGGTGTTTGATTTTGCAGATAGGAACCGTGGAGCTTACAGT
GATAATAACAATATTAGAGAAGGAGTTTGTCCATATTATTGTGATTTTGATGGATATCAG
GATGAATTGTTGTGGGGAGCAGCGTGGCTAAGAAGGGCTACGCAAAGAGACGATTATCTA
AGTTACATACAAGAAAATCGGCAGACACTTGGTGCGGATGACAATATTAATGAATTTGGA
TGGGATAATAAACACGCAGGCGTAAATGTTCTTGTTTCCAAGGAAGTGTTGGATGGGACC
ACGTACTCCCTTCAATCTTATAAAGCATCAGCAGATAGCTTCATGTGTACATTAATCCCA
GAATCATCATCTTCTCATATACAATACTCTCCTGGTGGACTAATTTACAAGCCTGGTGGA
AGCAATTTACAACATGCCACAACAATCACATTCCTACTACTAGTCTACGCAAATTACTTA
GAAAAATCATCACAAATATTGAATTGTGGTACTATAAGTGTGAGTCCATCGATGCTTCGA
AAAATTGGTAAGAGACAAGTCGATTACATTTTAGGTGAAAATCCTAAAGGTATATCATAC
ATGGTTGGTTATAGTAATTACTATCCTCAAAAAATTCATCATCGCGGATCGACTATTCCA
TCGATCAAAGATCATCCTCAGGTCATTGGATGCAACGAGGGCTCGATTTATTTTAACTCA
TCGCAGCCTAATCCAAATGTTTTAGTTGGTGCAATTGTTGGTGGTCCTGGAGAAGATGAT
GTTTATGATGATAATAGAGATGAATTTCGTAAATCTGAGCCAACTACTTATATTAATGCA
CCATTTGTTGGTGCACTTGCTTACTTTGCAGCTAATCCTAACGTTAATTAG

Peptide Sequence

PEP ID

Solyc01g110340.3.1
PEP Infomation

Endoglucanase (AHRD V3.3 *** M0ZU30_SOLTU)
Sequence

MKRNIISSKLMLLLLLLLPLLNCHGSYLDYTEALTKSILFFEGQRSGYLPQDQRMSWRGH
SGLSDGWEMNVDLTGGYYDAGDNVKFNFPMAFTTTLLAWSVIEFGEIMPPAELRNGLVAI
RWSTDYLLKTVSQPDRIFVQVGDPVLDHDCWERPEDMDTARTVYTVDAPNPASDVAGETA
AALAAASIAFRPSDPGYAETLLRTSTRVFDFADRNRGAYSDNNNIREGVCPYYCDFDGYQ
DELLWGAAWLRRATQRDDYLSYIQENRQTLGADDNINEFGWDNKHAGVNVLVSKEVLDGT
TYSLQSYKASADSFMCTLIPESSSSHIQYSPGGLIYKPGGSNLQHATTITFLLLVYANYL
EKSSQILNCGTISVSPSMLRKIGKRQVDYILGENPKGISYMVGYSNYYPQKIHHRGSTIP
SIKDHPQVIGCNEGSIYFNSSQPNPNVLVGAIVGGPGEDDVYDDNRDEFRKSEPTTYINA
PFVGALAYFAANPNVN*

Transcript Sequence

Transcript ID

Solyc01g110340.3.1
Transcript Infomation

Endoglucanase (AHRD V3.3 *** M0ZU30_SOLTU)
Sequence

GAAGAGAAGAAGCTTAGAAAAAAAAATGAAGAGAAATATAATTTCTTCAAAATTAATGCT
GCTTCTTCTCCTTCTTCTTCCATTATTAAACTGCCATGGAAGCTACCTTGATTATACAGA
AGCATTAACCAAATCCATTCTCTTCTTCGAAGGCCAACGCTCCGGCTATTTACCGCAGGA
CCAGAGAATGAGCTGGCGAGGACATTCCGGTTTAAGCGATGGATGGGAGATGAATGTTGA
TTTGACCGGCGGTTACTACGACGCCGGAGATAATGTGAAGTTTAATTTTCCGATGGCGTT
TACGACGACGTTGCTTGCGTGGAGTGTAATTGAATTTGGGGAAATTATGCCGCCTGCTGA
ATTACGGAATGGTTTAGTCGCTATCCGTTGGTCCACTGATTATCTTCTCAAAACTGTTTC
TCAGCCAGATCGCATTTTCGTCCAGGTGGGTGATCCTGTACTGGACCATGACTGTTGGGA
AAGGCCAGAAGATATGGACACTGCTAGGACAGTGTACACAGTGGATGCCCCGAATCCGGC
ATCTGATGTGGCCGGAGAGACTGCAGCTGCCCTGGCAGCTGCATCTATAGCTTTCCGGCC
CTCAGATCCCGGATACGCAGAGACACTTTTGAGAACATCCACAAGGGTGTTTGATTTTGC
AGATAGGAACCGTGGAGCTTACAGTGATAATAACAATATTAGAGAAGGAGTTTGTCCATA
TTATTGTGATTTTGATGGATATCAGGATGAATTGTTGTGGGGAGCAGCGTGGCTAAGAAG
GGCTACGCAAAGAGACGATTATCTAAGTTACATACAAGAAAATCGGCAGACACTTGGTGC
GGATGACAATATTAATGAATTTGGATGGGATAATAAACACGCAGGCGTAAATGTTCTTGT
TTCCAAGGAAGTGTTGGATGGGACCACGTACTCCCTTCAATCTTATAAAGCATCAGCAGA
TAGCTTCATGTGTACATTAATCCCAGAATCATCATCTTCTCATATACAATACTCTCCTGG
TGGACTAATTTACAAGCCTGGTGGAAGCAATTTACAACATGCCACAACAATCACATTCCT
ACTACTAGTCTACGCAAATTACTTAGAAAAATCATCACAAATATTGAATTGTGGTACTAT
AAGTGTGAGTCCATCGATGCTTCGAAAAATTGGTAAGAGACAAGTCGATTACATTTTAGG
TGAAAATCCTAAAGGTATATCATACATGGTTGGTTATAGTAATTACTATCCTCAAAAAAT
TCATCATCGCGGATCGACTATTCCATCGATCAAAGATCATCCTCAGGTCATTGGATGCAA
CGAGGGCTCGATTTATTTTAACTCATCGCAGCCTAATCCAAATGTTTTAGTTGGTGCAAT
TGTTGGTGGTCCTGGAGAAGATGATGTTTATGATGATAATAGAGATGAATTTCGTAAATC
TGAGCCAACTACTTATATTAATGCACCATTTGTTGGTGCACTTGCTTACTTTGCAGCTAA
TCCTAACGTTAATTAGATGATCACCATACCTAATTTAATATTATGGTGAT