Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g110130.3.1
CDS Infomation

DNA helicase (AHRD V3.3 *** K4B3M6_SOLLC)
Sequence

ATGGCTTCCGACTCATCTCCGGTCAATGCTCGCGGCGGTCCATCTACACCAGATGATTCC
ATTTCAAGTCCAATTGGCAACACTTACTCTTCTCCTGGCGACTCTGCTCGCCGGAAGCGT
GGCCGCCGCTCGGCCTCATCGACGCCAGTAGCACCGTCAAATCGGCGATTCACAACTCCT
GAGGCTACACCAACACCGTCGAGTACTAATCCTCGCCGTGGTGGAAGAAGAGCATCCTCC
AACACTCCTACCGGTGCCGCGACTCCATCCTATGCCTCTGATGTTCCGCCTTCCTCAGAA
GGCGGGGAAGGTGATGATGCCGATGATACCCCACCTATGTATGTGTGGGGCACAAACATC
AGCGTGCAAGATGTAAACGCTGCAATCCTTAGGTTTTTGAGGAATTTCCGGGAGGATCCT
TCTCAAACTGAGGGGAAATACATGAGGGCAGTTCATAATGTAATTGAAATGGAAGGCGAC
TCACTCGATGTTGATGCGCATGATGTGTTCGACTATGATGGTGATTTGTATACCAAAATG
GTCAGATTTCCACTTGAGGTTCTAGCAATTTTTGACATTGTCTTAATGGACATGGTTAGC
AGAATCAACCCACTCTTTGAAAAGCACATACAAGCTAGAATTTTCAATCTTAAGACGTCC
ACTTCAATGAGAAATCTCAATCCATCTGATATTGAGAAGATGGTGTCACTCAAAGGGATG
ATTATCCGTTGTAGTGCAATTATTCCAGAGATAAGAGAAGCAATATTTAGATGTCTTGTT
TGTGGCTATTACTCTGACCCAATTGTCGTAGACAGAGGAAGAATTAGTGAGCCGACAATA
TGCGGCAAGCAAGAATGTCTGGCAAGGAACTCAATGACTCTGGTTCACAATAGATGCAGG
TTTGCTGATAAACAAATTGTGAGAGTTCAAGAAACACCAGATGAGATCCCTGAGGGAGGA
ACACCTCACACAGTAAGCTTGTTGATGCATGACAAGCTGGTGGATGCGGGGAAGCCAGGT
GACAGAGTTGAAGTCACTGGGATTTATAGGGCTATGAGTGTCAGAATTGGGCCAGCACAC
AGGACTGTAAAATCATTGTTCAAGACTTACATTGACTGTCTTCATCTTAAGAAGACTGAC
AAATCAAGAATGCACGCAGAGGATCCAATGGAAATTGAAAATGGTGTTGTTGGAAATGAT
GAGCCTCTTGATCATGAAGAAAAGGTGGAGAAATTGATAGAACTATCTAAACAGCCTGAT
ATCTATGAAAGGCTGACCAGGTCCTTGGCACCAAACATATGGGAGTTGGATGATGTTAAG
AAAGGCCTTCTTTGCCAGCTCTTTGGTGGAAATGCATTGACCTTGCCGTCTGGAGCAAGC
TTCCGTGGTGATATCAACATTCTTCTTGTTGGTGATCCGGGGACCAGCAAATCACAACTG
CTCCAGTATATTCACAAACTGTCTCCTCGTGGTATATACACAAGTGGACGAGGAAGTTCA
GCTGTGGGGTTGACTGCTTATGTAGCCAAAGATCCCGAGACTGGTGAAACTGTCCTTGAG
AGTGGCGCTCTGGTCTTGAGTGACAGAGGGATCTGCTGTATTGACGAGTTTGACAAAATG
TCTGACAGTGCCAGGAGCATGTTACATGAGGTGATGGAGCAACAAACTGTTTCAATTGCA
AAGGCTGGAATTATCGCTTCGCTTAATGCTAGGACTTCAGTATTGGCATGTGCAAATCCA
ATTGGCTCCCGTTACAATCCCCGATTATCTGTCATTGATAATATACACCTTCCACCTACC
CTGCTGTCTAGATTTGATTTGATATATTTAATTCTAGACAAAGCAGATGAGCAGACCGAC
AGGCGCCTTGCAAAGCACATAGTTGCTTTACACTCTGAGAATCCTGAGAACTCTGAGCAA
GAAGTGATTGACCTTCCAACATTAGCTTCATACTTGAGCTATGCTCGAAAACATATACAT
CCACAATTATCTGATGAAGCAGCTGAAGAATTGACTAGAGGTTATGTGGAGATGAGAAGA
AAAGGGAATTTCCCCGGTAGCAGTAAAAAGGTGATTACAGCTACACCAAGGCAGCTAGAG
AGTTTGATACGTCTAGGTGAAGGTCTTGCTCGGATGCGTTTTTCAGAAAAGGTGGAGAAA
AGAGATGTAGTGGAGGCTTTTCGACTTCTAGAAGTTGCATTGCAGCAGTCTGCAACTGAC
CATGCTACAGGAACCATTGACATGGATCTCATCACAACTGGAGTATCTGCAAGTGAAAGG
ATGAGAAGGGAGAATTTGGTGTCAAGCACCCGCAACATAATTATGGAGAAGATGCAGCTT
GGGGGACCATCAACTCGTTTGCTAGAGTTACTGGAAGACGTCAAGAAGCAAAGTTCTGGT
GGTGAAGTCCACCTAGCAGATCTGCGAAATGCACTGGCTACCCTCGCAACCGAAGGACTG
GTTGTTGTTCATGGAGACACTGTGAAGAGAATATGA

Peptide Sequence

PEP ID

Solyc01g110130.3.1
PEP Infomation

DNA helicase (AHRD V3.3 *** K4B3M6_SOLLC)
Sequence

MASDSSPVNARGGPSTPDDSISSPIGNTYSSPGDSARRKRGRRSASSTPVAPSNRRFTTP
EATPTPSSTNPRRGGRRASSNTPTGAATPSYASDVPPSSEGGEGDDADDTPPMYVWGTNI
SVQDVNAAILRFLRNFREDPSQTEGKYMRAVHNVIEMEGDSLDVDAHDVFDYDGDLYTKM
VRFPLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLKTSTSMRNLNPSDIEKMVSLKGM
IIRCSAIIPEIREAIFRCLVCGYYSDPIVVDRGRISEPTICGKQECLARNSMTLVHNRCR
FADKQIVRVQETPDEIPEGGTPHTVSLLMHDKLVDAGKPGDRVEVTGIYRAMSVRIGPAH
RTVKSLFKTYIDCLHLKKTDKSRMHAEDPMEIENGVVGNDEPLDHEEKVEKLIELSKQPD
IYERLTRSLAPNIWELDDVKKGLLCQLFGGNALTLPSGASFRGDINILLVGDPGTSKSQL
LQYIHKLSPRGIYTSGRGSSAVGLTAYVAKDPETGETVLESGALVLSDRGICCIDEFDKM
SDSARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPIGSRYNPRLSVIDNIHLPPT
LLSRFDLIYLILDKADEQTDRRLAKHIVALHSENPENSEQEVIDLPTLASYLSYARKHIH
PQLSDEAAEELTRGYVEMRRKGNFPGSSKKVITATPRQLESLIRLGEGLARMRFSEKVEK
RDVVEAFRLLEVALQQSATDHATGTIDMDLITTGVSASERMRRENLVSSTRNIIMEKMQL
GGPSTRLLELLEDVKKQSSGGEVHLADLRNALATLATEGLVVVHGDTVKRI*

Transcript Sequence

Transcript ID

Solyc01g110130.3.1
Transcript Infomation

DNA helicase (AHRD V3.3 *** K4B3M6_SOLLC)
Sequence

CAAAGCCTCCCGCCTCAGATCAAGCCCTAACAATTTCTTTCTTCAATCCCAATCTGCAAT
CCTTACAGTTACATCCGAAAAAGTCCCGGCGAACGGAGGATGGCTTCCGACTCATCTCCG
GTCAATGCTCGCGGCGGTCCATCTACACCAGATGATTCCATTTCAAGTCCAATTGGCAAC
ACTTACTCTTCTCCTGGCGACTCTGCTCGCCGGAAGCGTGGCCGCCGCTCGGCCTCATCG
ACGCCAGTAGCACCGTCAAATCGGCGATTCACAACTCCTGAGGCTACACCAACACCGTCG
AGTACTAATCCTCGCCGTGGTGGAAGAAGAGCATCCTCCAACACTCCTACCGGTGCCGCG
ACTCCATCCTATGCCTCTGATGTTCCGCCTTCCTCAGAAGGCGGGGAAGGTGATGATGCC
GATGATACCCCACCTATGTATGTGTGGGGCACAAACATCAGCGTGCAAGATGTAAACGCT
GCAATCCTTAGGTTTTTGAGGAATTTCCGGGAGGATCCTTCTCAAACTGAGGGGAAATAC
ATGAGGGCAGTTCATAATGTAATTGAAATGGAAGGCGACTCACTCGATGTTGATGCGCAT
GATGTGTTCGACTATGATGGTGATTTGTATACCAAAATGGTCAGATTTCCACTTGAGGTT
CTAGCAATTTTTGACATTGTCTTAATGGACATGGTTAGCAGAATCAACCCACTCTTTGAA
AAGCACATACAAGCTAGAATTTTCAATCTTAAGACGTCCACTTCAATGAGAAATCTCAAT
CCATCTGATATTGAGAAGATGGTGTCACTCAAAGGGATGATTATCCGTTGTAGTGCAATT
ATTCCAGAGATAAGAGAAGCAATATTTAGATGTCTTGTTTGTGGCTATTACTCTGACCCA
ATTGTCGTAGACAGAGGAAGAATTAGTGAGCCGACAATATGCGGCAAGCAAGAATGTCTG
GCAAGGAACTCAATGACTCTGGTTCACAATAGATGCAGGTTTGCTGATAAACAAATTGTG
AGAGTTCAAGAAACACCAGATGAGATCCCTGAGGGAGGAACACCTCACACAGTAAGCTTG
TTGATGCATGACAAGCTGGTGGATGCGGGGAAGCCAGGTGACAGAGTTGAAGTCACTGGG
ATTTATAGGGCTATGAGTGTCAGAATTGGGCCAGCACACAGGACTGTAAAATCATTGTTC
AAGACTTACATTGACTGTCTTCATCTTAAGAAGACTGACAAATCAAGAATGCACGCAGAG
GATCCAATGGAAATTGAAAATGGTGTTGTTGGAAATGATGAGCCTCTTGATCATGAAGAA
AAGGTGGAGAAATTGATAGAACTATCTAAACAGCCTGATATCTATGAAAGGCTGACCAGG
TCCTTGGCACCAAACATATGGGAGTTGGATGATGTTAAGAAAGGCCTTCTTTGCCAGCTC
TTTGGTGGAAATGCATTGACCTTGCCGTCTGGAGCAAGCTTCCGTGGTGATATCAACATT
CTTCTTGTTGGTGATCCGGGGACCAGCAAATCACAACTGCTCCAGTATATTCACAAACTG
TCTCCTCGTGGTATATACACAAGTGGACGAGGAAGTTCAGCTGTGGGGTTGACTGCTTAT
GTAGCCAAAGATCCCGAGACTGGTGAAACTGTCCTTGAGAGTGGCGCTCTGGTCTTGAGT
GACAGAGGGATCTGCTGTATTGACGAGTTTGACAAAATGTCTGACAGTGCCAGGAGCATG
TTACATGAGGTGATGGAGCAACAAACTGTTTCAATTGCAAAGGCTGGAATTATCGCTTCG
CTTAATGCTAGGACTTCAGTATTGGCATGTGCAAATCCAATTGGCTCCCGTTACAATCCC
CGATTATCTGTCATTGATAATATACACCTTCCACCTACCCTGCTGTCTAGATTTGATTTG
ATATATTTAATTCTAGACAAAGCAGATGAGCAGACCGACAGGCGCCTTGCAAAGCACATA
GTTGCTTTACACTCTGAGAATCCTGAGAACTCTGAGCAAGAAGTGATTGACCTTCCAACA
TTAGCTTCATACTTGAGCTATGCTCGAAAACATATACATCCACAATTATCTGATGAAGCA
GCTGAAGAATTGACTAGAGGTTATGTGGAGATGAGAAGAAAAGGGAATTTCCCCGGTAGC
AGTAAAAAGGTGATTACAGCTACACCAAGGCAGCTAGAGAGTTTGATACGTCTAGGTGAA
GGTCTTGCTCGGATGCGTTTTTCAGAAAAGGTGGAGAAAAGAGATGTAGTGGAGGCTTTT
CGACTTCTAGAAGTTGCATTGCAGCAGTCTGCAACTGACCATGCTACAGGAACCATTGAC
ATGGATCTCATCACAACTGGAGTATCTGCAAGTGAAAGGATGAGAAGGGAGAATTTGGTG
TCAAGCACCCGCAACATAATTATGGAGAAGATGCAGCTTGGGGGACCATCAACTCGTTTG
CTAGAGTTACTGGAAGACGTCAAGAAGCAAAGTTCTGGTGGTGAAGTCCACCTAGCAGAT
CTGCGAAATGCACTGGCTACCCTCGCAACCGAAGGACTGGTTGTTGTTCATGGAGACACT
GTGAAGAGAATATGATGAGAGGAGTGCTCCGGAAACTTGGGTCGATATGCACATTGACAT
TATTTGCTAGAGCATTCACATGCACTTGGCATATCCGCGGTCTACTTCACTGTGCCCTTT
GAAACGATTAGCCATATTGTAAGAGTAACATGTATGACTTTGCAATCTAGTGTTTTTGTC
TTTGAACTTGATCTTTAATTAAGAGCTTGGGTTAAGTTAAAACATGAATCTGTAAAATAG
AAATTAGATGATAGGTTCCGTGCACAACATCGCCGGTTCTGGCGTATATTTGTTGAGAGT
TGGCGAAAAACATTTCATTTACATGTTAATTTAAACTGTATCCAATTTATCTGTTGTTAA
TAGTCCAAATCAACCCATGTAGCTCACCCAAAATTAGAGACTTGAATATGTAATTTCAGA
CTCTTTACTACGTTTGGATTCTGG