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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g110110.3.1
CDS Infomation

Cysteine proteinase (AHRD V3.3 *** C0KIY3_SOLLC)
Sequence

ATGGCTCATCGTTTCTCTCTCGTTTTCGTATTATCTATCCTCCTAACGACGTCGTTCTTG
TTGGCTGTCAACGGCGAGATTAAAGGCGGGGACGATGATATTTTAATCCGTCAAGTCGTC
GGCGATGAGGACCATCACATGCTAAACGCCGAACATCACTTTACGCTTTTTAAGAAGAGA
TTCGGGAAAACGTACGCCTCCGATGAGGAGCATCATTATAGATTTTCGGTTTTTAAAGCT
AACTTGCGCCGTGCAATGAGACACCAGAAGCTCGATCCATCTGCTGTTCACGGCGTGACT
CAGTTTTCCGATATGACGCCGGATGAATTCAGCCAGAAATTTCTCGGCGTTAACCGCCGG
CTTCGGTTTCCTTCTGACGCCAATAAAGCTCCGATTCTTCCTACTGAGGATCTTCCTTCA
GATTTCGATTGGAGAGAGCACGGTGCTGTCACGCCAGTGAAGAATCAGGGTTCATGCGGC
TCATGCTGGTCATTTAGTACCACTGGTGCATTAGAAGGTGCCAACTTTCTTGCTACAGGG
AAGCTTGTTAGCCTCAGCGAGCAGCAACTTGTGGACTGTGATCACGAGTGTGATCCAGAA
GAAAAAGATTCTTGCGACTCAGGCTGCAGTGGTGGGCTAATGAATAGTGCCTTTGAATAC
ACTCTCAAAGCTGGTGGACTAATGCGAGAAGAAGATTACCCATACACTGGTACCGATAAG
GCAACCTGCAAATTTGACAACACCAAGGTTGCAGCTAAAGTTGCTAACTTTAGTGTTGTC
TCCCTAGACGAAGAACAAATTGCTGCTAATCTTGTCAAGAATGGCCCTCTCGCTGTGGCT
ATCAATGCAGTGTTCATGCAGACATATGTCGGTGGAGTCTCCTGCCCATATATATGCTCT
AAGCAGTTGGATCATGGTGTCTTATTAGTTGGTTATGGTACTGGCTTCTCTCCCATTCGA
ATGAAAGAGAAACCGTACTGGATCATCAAGAACTCATGGGGAGAGAAATGGGGAGAAAGT
GGATACTACAAAATCTGCAGAGGCCGCAATGTTTGTGGAGTGGATTCAATGGTTTCAACA
GTTGCAGCTGTTAGTACCAGCTCATGGTAA

Peptide Sequence

PEP ID

Solyc01g110110.3.1
PEP Infomation

Cysteine proteinase (AHRD V3.3 *** C0KIY3_SOLLC)
Sequence

MAHRFSLVFVLSILLTTSFLLAVNGEIKGGDDDILIRQVVGDEDHHMLNAEHHFTLFKKR
FGKTYASDEEHHYRFSVFKANLRRAMRHQKLDPSAVHGVTQFSDMTPDEFSQKFLGVNRR
LRFPSDANKAPILPTEDLPSDFDWREHGAVTPVKNQGSCGSCWSFSTTGALEGANFLATG
KLVSLSEQQLVDCDHECDPEEKDSCDSGCSGGLMNSAFEYTLKAGGLMREEDYPYTGTDK
ATCKFDNTKVAAKVANFSVVSLDEEQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYICS
KQLDHGVLLVGYGTGFSPIRMKEKPYWIIKNSWGEKWGESGYYKICRGRNVCGVDSMVST
VAAVSTSSW*

Transcript Sequence

Transcript ID

Solyc01g110110.3.1
Transcript Infomation

Cysteine proteinase (AHRD V3.3 *** C0KIY3_SOLLC)
Sequence

AGAAAACAAATCTTCTCAGTCAACAATGGCTCATCGTTTCTCTCTCGTTTTCGTATTATC
TATCCTCCTAACGACGTCGTTCTTGTTGGCTGTCAACGGCGAGATTAAAGGCGGGGACGA
TGATATTTTAATCCGTCAAGTCGTCGGCGATGAGGACCATCACATGCTAAACGCCGAACA
TCACTTTACGCTTTTTAAGAAGAGATTCGGGAAAACGTACGCCTCCGATGAGGAGCATCA
TTATAGATTTTCGGTTTTTAAAGCTAACTTGCGCCGTGCAATGAGACACCAGAAGCTCGA
TCCATCTGCTGTTCACGGCGTGACTCAGTTTTCCGATATGACGCCGGATGAATTCAGCCA
GAAATTTCTCGGCGTTAACCGCCGGCTTCGGTTTCCTTCTGACGCCAATAAAGCTCCGAT
TCTTCCTACTGAGGATCTTCCTTCAGATTTCGATTGGAGAGAGCACGGTGCTGTCACGCC
AGTGAAGAATCAGGGTTCATGCGGCTCATGCTGGTCATTTAGTACCACTGGTGCATTAGA
AGGTGCCAACTTTCTTGCTACAGGGAAGCTTGTTAGCCTCAGCGAGCAGCAACTTGTGGA
CTGTGATCACGAGTGTGATCCAGAAGAAAAAGATTCTTGCGACTCAGGCTGCAGTGGTGG
GCTAATGAATAGTGCCTTTGAATACACTCTCAAAGCTGGTGGACTAATGCGAGAAGAAGA
TTACCCATACACTGGTACCGATAAGGCAACCTGCAAATTTGACAACACCAAGGTTGCAGC
TAAAGTTGCTAACTTTAGTGTTGTCTCCCTAGACGAAGAACAAATTGCTGCTAATCTTGT
CAAGAATGGCCCTCTCGCTGTGGCTATCAATGCAGTGTTCATGCAGACATATGTCGGTGG
AGTCTCCTGCCCATATATATGCTCTAAGCAGTTGGATCATGGTGTCTTATTAGTTGGTTA
TGGTACTGGCTTCTCTCCCATTCGAATGAAAGAGAAACCGTACTGGATCATCAAGAACTC
ATGGGGAGAGAAATGGGGAGAAAGTGGATACTACAAAATCTGCAGAGGCCGCAATGTTTG
TGGAGTGGATTCAATGGTTTCAACAGTTGCAGCTGTTAGTACCAGCTCATGGTAAAATTT
TAAGTCTATTTTTACCAACTACACTCTATGTAAATTAAGTGTAGCTTAAAGGACCATATT
TCATTATTTCCAATTGCTAAGACTCTTTTTCATTATATTATTTCCAATTCAACAATTCTT
GAAAGTAAAACACATTTCTCCGCTTCTATCTATTAGTTTGGTGTTTCTTCACTCTACATA
CATTCCTTTATAAT