Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g110000.3.1
CDS Infomation

Beta-galactosidase (AHRD V3.3 *** A0A0V0ITW0_SOLCH)
Sequence

ATGGGTATCAATACCAAATGGTTCTTGATATTTTTTGTGTTGATTTTTGGGTCTAAGATT
TGTTATTGTAGTGTTAGTTATGATAAGAAATCTCTCATTATCAATGGACAAAGAAAAATT
CTGTTTTCTGGCTCTGTTCATTATCCAAGAAGCACCCCTGATATGTGGGAGGGCATTATA
CAGAAGGCAAAAGATGGAGGATTGGATGTTATAGAAACCTATGTGTTTTGGAATCTTCAT
GAACCTTCACCTGGCAATTACAACTTTGAGGGGCGTAATGATTTAGTTCGATTCATAAAG
CTGATTCAGAAGGCAGGGCTTTATATGCATCTTCGAATTGGGCCTTATATTTGTGGAGAG
TGGAATTTTGGTGGTTTTCCTGTATGGTTGAAGTATGTTCCTGGAATCAGCTTTAGAACC
AATAATGAACCTTTCAAGAGGGAAATGCAAAGATTCACCACGAAAATTGTCCAAATGATG
AAGAATGAGAAGCTATTTCAGACCCAAGGTGGTCCTATCATTCTGTCTCAGATTGAGAAC
GAGTATGGGTTAGAAATAAAACAATATGGTGCTCCAGGTCATGCATACATGACTTGGGCA
GCTAAAATGGCTGTTGAAATGGGTACTGGGGTCCCGTGGGTCATGTGCAAGGAGGATGAT
GCCCCTGATCCAGTGATAAACACCTGCAATGGTTTTTATTGTGATTATTTTTCCCCTAAC
AAACCTAACAAGCCAACAATATGGACAGAGGCATGGAGTGGCTGGTTTGATGATTTTGGC
GGTCCAGTTCATCATCGACCAGTTGAAGATTTGGCCTTTGCAGTAGCTCGGTTCATTCAA
AAAGGTGGCTCTTTGGTGAATTATTATATGTATCACGGGGGAACCAACTTTGGAAGAACA
GCTGGAGGGCCTTTTATCACTACCAGCTATGACTATGATGCTCCTATTGATGAATATGGC
TTGATTAGGCAGCCAAAGTATGACCATTTGAAGGAGCTTCATAAGGCTGTCAAGTTATGT
GAACCAGCACTAATTTCTGCTGATCCTACCGTTACTGTCTTAGGGAACTATGAACAGGCA
CATGTATTTTCTTCCGGCTCTGGACATTGTGCTGCTTTTCTTGCAAATTACCATTTGAGT
TCAACTGCAAGGGTGACATTTAGGCACCAACATTACGATCTGCCACCTTGGTCAATAAGC
ATTCTTCCAGATTGTAAAAATGTTGTATATAATACTGCCAGGGTTGGAGTCAAGACATCC
ACTGCACAAATGCTGCCCACAAATGTACAACTGCGCACTTGGGAAACATTTAGCGAAGAT
GTATCCACCATTGACGCGGATTCAAAGTTCACTGTTGTTGGTCTGTTGGAGCAATTAAAT
GTTACCAGGGATATGAGTGACTACCTTTGGTACACCACTAGCGTCGAGATAAATTCAGCT
GAATCATTTCTACACCGAGGGCAACATCCTACTCTTGCTGTGCAGTCAGCAGGCCATGCC
TTGCACGTTTATGTTAATGGACGGCTTTCAGGTTCAGTTTATGGAAACCGAGAAAACCGA
AGAGTTACATTTACAGGAGGTGTTAACCTGCATGCTGGAATAAACAGAATTTCTCTACTC
AGTGTAGCTGTTGGATTGCCGAACAACGGAGCACGTTATGAGACATGGAGTGCAGGAGTC
CTTGGGCCAGTCGTTCTTCATGGGCTAGACAAGGGTCAAAGGGACTTATCATGGCAGAAA
TGGTCATATCAGGTGGGGTTGAGAGGCGAGGCCATGAACTTGGCTTCAAATGCAATATCT
GCTGCTGAATGGGTAGGAGGCTCTTTGATTGCAAGACAGCGACAACCTCTTACATGGTAC
AAGGTATATTTCAATGCACCAGGAGGAAGTGATCCATTAGCACTGGACATGGGTAGTATG
GGAAAAGGTCAAGTATGGATCAATGGACAGAGCATTGGAAGATACTGGACCGCTTATGCC
ACTGGTAACTGCAGTCCTTGTACTTATGCAGCTACATACAGACAAGGAAAGTGCCAATCT
GGTTGCGGCCAGCCAACTCAAAGATGGTACCACGTTCCTCGATCTTGGTTGAAGCCAACT
GGGAACTTGCTGGTAGTTTTTGAGGAGATAGGTGGGGATGCATCAAAGATTTCTCTTGTC
AAACGGTCAATTACACATGTATAG

Peptide Sequence

PEP ID

Solyc01g110000.3.1
PEP Infomation

Beta-galactosidase (AHRD V3.3 *** A0A0V0ITW0_SOLCH)
Sequence

MGINTKWFLIFFVLIFGSKICYCSVSYDKKSLIINGQRKILFSGSVHYPRSTPDMWEGII
QKAKDGGLDVIETYVFWNLHEPSPGNYNFEGRNDLVRFIKLIQKAGLYMHLRIGPYICGE
WNFGGFPVWLKYVPGISFRTNNEPFKREMQRFTTKIVQMMKNEKLFQTQGGPIILSQIEN
EYGLEIKQYGAPGHAYMTWAAKMAVEMGTGVPWVMCKEDDAPDPVINTCNGFYCDYFSPN
KPNKPTIWTEAWSGWFDDFGGPVHHRPVEDLAFAVARFIQKGGSLVNYYMYHGGTNFGRT
AGGPFITTSYDYDAPIDEYGLIRQPKYDHLKELHKAVKLCEPALISADPTVTVLGNYEQA
HVFSSGSGHCAAFLANYHLSSTARVTFRHQHYDLPPWSISILPDCKNVVYNTARVGVKTS
TAQMLPTNVQLRTWETFSEDVSTIDADSKFTVVGLLEQLNVTRDMSDYLWYTTSVEINSA
ESFLHRGQHPTLAVQSAGHALHVYVNGRLSGSVYGNRENRRVTFTGGVNLHAGINRISLL
SVAVGLPNNGARYETWSAGVLGPVVLHGLDKGQRDLSWQKWSYQVGLRGEAMNLASNAIS
AAEWVGGSLIARQRQPLTWYKVYFNAPGGSDPLALDMGSMGKGQVWINGQSIGRYWTAYA
TGNCSPCTYAATYRQGKCQSGCGQPTQRWYHVPRSWLKPTGNLLVVFEEIGGDASKISLV
KRSITHV*

Transcript Sequence

Transcript ID

Solyc01g110000.3.1
Transcript Infomation

Beta-galactosidase (AHRD V3.3 *** A0A0V0ITW0_SOLCH)
Sequence

AGTCACAAGAATATGACTAAAAAATCTAGAAATTTTTGTGTGTGTGAGAGAGAAAAACAT
AATTTCTTGAAGAACCAAAAGCGAGAGGTCGGCGGTGTCTGTATCTATAAAGATTGAGAC
TTGGGAGTGGCATTTGCTGCAAAATACCACCAAAAATATTCATATGACATTTATGACCAT
TGAGTATTGTCAAATGCAGAGTAACAAAATCCAAAATACTGTTACTTTTTTTCTTTCTTT
CTCAGTGTGTGTGATTATCTGTCACAGACATTCTTAGCCTTTTGTGAATTCTTGTCAGTG
TCCTTTTTTGTTTGCACTTTTGCAGGCCTTCTCTCTTTCTTCTTTATTCACATTTTATCA
TTTCCCACTTTGCTTTCTCCACCATTGTTGTGAGATAAGCATATTGCATATTCTTTTTTT
AAGTAAAATCAAAATGGGTATCAATACCAAATGGTTCTTGATATTTTTTGTGTTGATTTT
TGGGTCTAAGATTTGTTATTGTAGTGTTAGTTATGATAAGAAATCTCTCATTATCAATGG
ACAAAGAAAAATTCTGTTTTCTGGCTCTGTTCATTATCCAAGAAGCACCCCTGATATGTG
GGAGGGCATTATACAGAAGGCAAAAGATGGAGGATTGGATGTTATAGAAACCTATGTGTT
TTGGAATCTTCATGAACCTTCACCTGGCAATTACAACTTTGAGGGGCGTAATGATTTAGT
TCGATTCATAAAGCTGATTCAGAAGGCAGGGCTTTATATGCATCTTCGAATTGGGCCTTA
TATTTGTGGAGAGTGGAATTTTGGTGGTTTTCCTGTATGGTTGAAGTATGTTCCTGGAAT
CAGCTTTAGAACCAATAATGAACCTTTCAAGAGGGAAATGCAAAGATTCACCACGAAAAT
TGTCCAAATGATGAAGAATGAGAAGCTATTTCAGACCCAAGGTGGTCCTATCATTCTGTC
TCAGATTGAGAACGAGTATGGGTTAGAAATAAAACAATATGGTGCTCCAGGTCATGCATA
CATGACTTGGGCAGCTAAAATGGCTGTTGAAATGGGTACTGGGGTCCCGTGGGTCATGTG
CAAGGAGGATGATGCCCCTGATCCAGTGATAAACACCTGCAATGGTTTTTATTGTGATTA
TTTTTCCCCTAACAAACCTAACAAGCCAACAATATGGACAGAGGCATGGAGTGGCTGGTT
TGATGATTTTGGCGGTCCAGTTCATCATCGACCAGTTGAAGATTTGGCCTTTGCAGTAGC
TCGGTTCATTCAAAAAGGTGGCTCTTTGGTGAATTATTATATGTATCACGGGGGAACCAA
CTTTGGAAGAACAGCTGGAGGGCCTTTTATCACTACCAGCTATGACTATGATGCTCCTAT
TGATGAATATGGCTTGATTAGGCAGCCAAAGTATGACCATTTGAAGGAGCTTCATAAGGC
TGTCAAGTTATGTGAACCAGCACTAATTTCTGCTGATCCTACCGTTACTGTCTTAGGGAA
CTATGAACAGGCACATGTATTTTCTTCCGGCTCTGGACATTGTGCTGCTTTTCTTGCAAA
TTACCATTTGAGTTCAACTGCAAGGGTGACATTTAGGCACCAACATTACGATCTGCCACC
TTGGTCAATAAGCATTCTTCCAGATTGTAAAAATGTTGTATATAATACTGCCAGGGTTGG
AGTCAAGACATCCACTGCACAAATGCTGCCCACAAATGTACAACTGCGCACTTGGGAAAC
ATTTAGCGAAGATGTATCCACCATTGACGCGGATTCAAAGTTCACTGTTGTTGGTCTGTT
GGAGCAATTAAATGTTACCAGGGATATGAGTGACTACCTTTGGTACACCACTAGCGTCGA
GATAAATTCAGCTGAATCATTTCTACACCGAGGGCAACATCCTACTCTTGCTGTGCAGTC
AGCAGGCCATGCCTTGCACGTTTATGTTAATGGACGGCTTTCAGGTTCAGTTTATGGAAA
CCGAGAAAACCGAAGAGTTACATTTACAGGAGGTGTTAACCTGCATGCTGGAATAAACAG
AATTTCTCTACTCAGTGTAGCTGTTGGATTGCCGAACAACGGAGCACGTTATGAGACATG
GAGTGCAGGAGTCCTTGGGCCAGTCGTTCTTCATGGGCTAGACAAGGGTCAAAGGGACTT
ATCATGGCAGAAATGGTCATATCAGGTGGGGTTGAGAGGCGAGGCCATGAACTTGGCTTC
AAATGCAATATCTGCTGCTGAATGGGTAGGAGGCTCTTTGATTGCAAGACAGCGACAACC
TCTTACATGGTACAAGGTATATTTCAATGCACCAGGAGGAAGTGATCCATTAGCACTGGA
CATGGGTAGTATGGGAAAAGGTCAAGTATGGATCAATGGACAGAGCATTGGAAGATACTG
GACCGCTTATGCCACTGGTAACTGCAGTCCTTGTACTTATGCAGCTACATACAGACAAGG
AAAGTGCCAATCTGGTTGCGGCCAGCCAACTCAAAGATGGTACCACGTTCCTCGATCTTG
GTTGAAGCCAACTGGGAACTTGCTGGTAGTTTTTGAGGAGATAGGTGGGGATGCATCAAA
GATTTCTCTTGTCAAACGGTCAATTACACATGTATAGATATGATATTATTTAGGTACCAC
TAATTAGAAAGTAAAGTTTGGTCTCATAGAACGAAATAGTTCAATGAAAAAACTCCTATG
CTAGTTTTTTCAGCAATAATTAGCTTATTTGCTTTGCAAAATTATCTTTGTTCAAAATAC
GGTTGCAATGCCACTGCTTGTCTTCCTCATCAGTGTATATATATTTACAAGTTATTGTTG
GAAAAAAGAATTCTGATCA