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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g109340.3.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT2G23780.3)
Sequence

ATGGATTATAGGGCAGGTGGATCATTGGGTGCTTTGCATTCAGCAGATATGAATTCTGAC
TCTGGTGATTTTGAATGCAATATCTGCTTTGAATTAGCTCAAGATCCTATAGTGACTCTT
TGTGGACACCTTTATTGTTGGCCATGCCTTTACGAATGGTTACAAGTTCATTCACATTCC
CACGAGTGTCCAATATGTAAGGCTCTCATAGAAGAGCACAAGTTGGTTCCAATATATGGA
CGAGGCAAAGCAAGTTCTGACCCAAGATCTCGGTTAAGACCGGGAATCAATATTCCTAAA
CGTCCAGTGGGGCAGAGACCTCAAACCGCTCCAGCTGTAGATATGGACTACCTCCGACAT
GATGAATTTGATTCCATAGGCGGACTCATGTCCATGCCCATGCCGAGTGCAAGGTTTGAA
AACTCAACATTATCTGCTCTTGTTGGAGCTATTCCAGCTTTGTTTAGTCTAAATAATGTA
CATGGATTTCATGATGCTACTGTTTATGGGGCGACTAGCGGAGTTCCATACCTCTTTTCT
GGTTCATTTCATGGAGGTTATGCTCATGGTTTCCATCACTCTAACCACCTAGATTGGACT
AAGTTCTTTATGAAGGTGCTTTTCTTGATCGCCGGTTTCCTCTTAATTGTTTCCCTTATT
TCATAA

Peptide Sequence

PEP ID

Solyc01g109340.3.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT2G23780.3)
Sequence

MDYRAGGSLGALHSADMNSDSGDFECNICFELAQDPIVTLCGHLYCWPCLYEWLQVHSHS
HECPICKALIEEHKLVPIYGRGKASSDPRSRLRPGINIPKRPVGQRPQTAPAVDMDYLRH
DEFDSIGGLMSMPMPSARFENSTLSALVGAIPALFSLNNVHGFHDATVYGATSGVPYLFS
GSFHGGYAHGFHHSNHLDWTKFFMKVLFLIAGFLLIVSLIS*

Transcript Sequence

Transcript ID

Solyc01g109340.3.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT2G23780.3)
Sequence

AGACAGTTCGTAATTGATCCTTGATTGACAACTTGTACGATTATCAAATTGTTATAATTC
ACTATTAGACAATTCATAATTGAGTATTTTTCATTAATTGATCGATACATTATATTAAAA
TCAATAATGAACTTTCAGATTTGTTATACTAAGAAAGGCATTACCGACATACCTTCCACG
AAATTATGTTCACGAAAACGTTGGAGGGACCATGTTTGATTAATTAAGATTGACAAAACT
AGCTAAGCAGATCATTAGGGAGTATAGGTAATAGTAAAATTAGGCACCTACCGACAATAG
AGCTGAGAAAAAAAAATCACTTTATGGTATTAGCCAAACCCATTCCAAATTCCCTTTTCA
TCTCATGTAGTGTCTGTCATCTGATTCCAGGTTTTTGATTCTTGGTTTGTGGATATGGAT
TATAGGGCAGGTGGATCATTGGGTGCTTTGCATTCAGCAGATATGAATTCTGACTCTGGT
GATTTTGAATGCAATATCTGCTTTGAATTAGCTCAAGATCCTATAGTGACTCTTTGTGGA
CACCTTTATTGTTGGCCATGCCTTTACGAATGGTTACAAGTTCATTCACATTCCCACGAG
TGTCCAATATGTAAGGCTCTCATAGAAGAGCACAAGTTGGTTCCAATATATGGACGAGGC
AAAGCAAGTTCTGACCCAAGATCTCGGTTAAGACCGGGAATCAATATTCCTAAACGTCCA
GTGGGGCAGAGACCTCAAACCGCTCCAGCTGTAGATATGGACTACCTCCGACATGATGAA
TTTGATTCCATAGGCGGACTCATGTCCATGCCCATGCCGAGTGCAAGGTTTGAAAACTCA
ACATTATCTGCTCTTGTTGGAGCTATTCCAGCTTTGTTTAGTCTAAATAATGTACATGGA
TTTCATGATGCTACTGTTTATGGGGCGACTAGCGGAGTTCCATACCTCTTTTCTGGTTCA
TTTCATGGAGGTTATGCTCATGGTTTCCATCACTCTAACCACCTAGATTGGACTAAGTTC
TTTATGAAGGTGCTTTTCTTGATCGCCGGTTTCCTCTTAATTGTTTCCCTTATTTCATAA
ATACATGTGTATATCCTATAGTGTGCTAACCTAAATATGTGTAGTAAAAACCAGTGCAAC
TTTCTTGCACGTCTTTAGGAGTTAGGGTTATGTATTTACTGTCATTAATTAGAACTACTA
GTATGATCTACACCATGTTTTTCCACTCCAATAAAAAGATGGTGGAGCTTTTCCTGTTAA
CTGTTGTGTAACCAATTCAAAAGAGGGTGATGTTTGGGCCTAAGTGAATTCTTGATTCAC
ATTATCGCTAGTTTCTCTTCAGTCCATTTGTAAACCCATACGGGTAGTTTG