Plant GARDEN How To ▶︎

JA

EN

Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g109060.3.1

CDS Infomation

Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RZG0_RICCO)

Sequence

ATGAGAAGTGTGGAACTACTCCGTTCGCTTTCACTCCGGCGTTTCTCTACACTTGGTCTA
TCCAAATCTACTTCTCCTACCATTCCGATTACTGCCGAAGTTCTGCGAGAATCAGTTACT
TCTTCTCAGTGGCATTTTATCAAACATGTTACGGGAGAACTAAACCCCACCTTGATTTCA
GCTACTCTTCCAGAGCTTCGTTCATCTCCTGACCGAGTACTCACTTTCATCGAAAATCTC
GGTCCTGATTGCTTAGACATATCCTGTTATTGTCTTGCCATTTCCATACTCTCTCGTCTC
CCCTCGCCTAAACAAGCCACTCACCTTCTCAAGCAAGTGATCAGTTCTCGCTTTGCTTCG
CCTAATGAGATTTTTTATGGGCTTGTGAGTGCTCGGGAGAAGCTGGTGGTGAAGAGTTCA
ATTGTGTTGGATTTGCTTGTAAGGGCGTATTGTGAATTGAAGAAGGGGGAGGATGCATTA
AAAGAAGGAAAGTTGAAGAAGGCAAAAGAGTTCATTGAACACATGCAGTGTTCAGGGGTT
AAGCCGAATTTAATATCTTTTAATACTGTGATTCATGGTTATTGTCTGAGAGGGGATATT
GAAGGAGCAAATAAGATTTTTGAGGCGATGACAGCAAAAGGAATTGAGCCTGATTCGTAT
ACGTTCAATTCTCTAGTTAGAGGGATGGTGAAAGAGGGGAGGGAAAAGGAGGTCTCTTCC
TTGTTAGAGAAAATGAAACCGTTTGGGTTGATCCCTACAGCTGTGACTTACAACACTCTG
ATAGATTCATGCTGCAGTAAAGGGGACCTAGAAAAAGCATTTTTTTACCGAGATGAGATG
GTTAAGATAGGCATCGTGCCGAGTGTTGCTACCTATAACTTGTTGATCCATGCATTGTTT
CTTGATGGCAGAATGGTAGAAACTGATGATTTGCTGAAAGATATGTCGGAGAAGAGAGTA
CTTCCTGATGGTATTACATACAACATATTGATCAACGGCTATTGCAGGGTGGGAAATGCA
AAGAAGGCATTTAAGTTCTATGATGAATTGTTGAGTAGGGGTCTCCAACCAACTATTGTC
ACTTATACATCTCTAATCAAAGTCTTGGGCAAAAGGAATAGGATGAAAGAAGCAGATGAT
TTAGTTGTTGAAATATTGCGGAAAGGGATATTTCCAGATCTGATTATGTTCAATGCATTA
ATTGATGGCCATTGTGCCAATGACAACGTTGAGCGTGCTTTTGATACACTGAACGGGATG
AATAAAATGAATGTTCAGCCTGATGAAGTTACCTACAATACTCTGATGCAAGGGTATTGT
AAGAAGGGTAAAGTTGAAGAAGCTTGTATGCTTCTCGAAGAGATGAAGGGAAGAGGAATT
AAACCTGATCATATCAGCTATAACACTCTAATCAGTGGGTATAGTAGAAGAGGCGACATG
CATGATGCATTCAGAATTCGTGATGACATGTTAAGTGCAGGGTTTAACCCCACTCTTCTC
ACTTACAATGCTCTCATACAAGGTTTATGCAAAAAGCAGGAAGGTGTACTTGCTGAGGAA
CTTCTCAAAGAAATGGTTAGTAAAGGCATTACTCCTGATGATAGCACTTATCTTGCTTTG
ATTGAAGGGATTGGTGATGTTGATAATACAGATAGAGAACTCCGAGGACGGTGTCTATTG
TGGTTAATGATGGTTATAAGGGAATTAGGAAAGACATCTGCGCATGCTGATAGTTGTCAT
TTCCATAATGCTGACAACTCCTTGGTGATTCTTTGGATAAAAGGGGACTCGCGTGGCTTG
AAGTACCTGCTGAAACTGAAAGATTCACACTGTTATGGTTCATCCTTTCCAAGTGGCTTG
CATCTTCAGATTTTTTCTGATCAGATCGACATGACTGTCTGA

Peptide Sequence

PEP ID

Solyc01g109060.3.1

PEP Infomation

Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RZG0_RICCO)

Sequence

MRSVELLRSLSLRRFSTLGLSKSTSPTIPITAEVLRESVTSSQWHFIKHVTGELNPTLIS
ATLPELRSSPDRVLTFIENLGPDCLDISCYCLAISILSRLPSPKQATHLLKQVISSRFAS
PNEIFYGLVSAREKLVVKSSIVLDLLVRAYCELKKGEDALKEGKLKKAKEFIEHMQCSGV
KPNLISFNTVIHGYCLRGDIEGANKIFEAMTAKGIEPDSYTFNSLVRGMVKEGREKEVSS
LLEKMKPFGLIPTAVTYNTLIDSCCSKGDLEKAFFYRDEMVKIGIVPSVATYNLLIHALF
LDGRMVETDDLLKDMSEKRVLPDGITYNILINGYCRVGNAKKAFKFYDELLSRGLQPTIV
TYTSLIKVLGKRNRMKEADDLVVEILRKGIFPDLIMFNALIDGHCANDNVERAFDTLNGM
NKMNVQPDEVTYNTLMQGYCKKGKVEEACMLLEEMKGRGIKPDHISYNTLISGYSRRGDM
HDAFRIRDDMLSAGFNPTLLTYNALIQGLCKKQEGVLAEELLKEMVSKGITPDDSTYLAL
IEGIGDVDNTDRELRGRCLLWLMMVIRELGKTSAHADSCHFHNADNSLVILWIKGDSRGL
KYLLKLKDSHCYGSSFPSGLHLQIFSDQIDMTV*

Transcript Sequence

Transcript ID

Solyc01g109060.3.1

Transcript Infomation

Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RZG0_RICCO)

Sequence

ATGAGAAGTGTGGAACTACTCCGTTCGCTTTCACTCCGGCGTTTCTCTACACTTGGTCTA
TCCAAATCTACTTCTCCTACCATTCCGATTACTGCCGAAGTTCTGCGAGAATCAGTTACT
TCTTCTCAGTGGCATTTTATCAAACATGTTACGGGAGAACTAAACCCCACCTTGATTTCA
GCTACTCTTCCAGAGCTTCGTTCATCTCCTGACCGAGTACTCACTTTCATCGAAAATCTC
GGTCCTGATTGCTTAGACATATCCTGTTATTGTCTTGCCATTTCCATACTCTCTCGTCTC
CCCTCGCCTAAACAAGCCACTCACCTTCTCAAGCAAGTGATCAGTTCTCGCTTTGCTTCG
CCTAATGAGATTTTTTATGGGCTTGTGAGTGCTCGGGAGAAGCTGGTGGTGAAGAGTTCA
ATTGTGTTGGATTTGCTTGTAAGGGCGTATTGTGAATTGAAGAAGGGGGAGGATGCATTA
AAAGAAGGAAAGTTGAAGAAGGCAAAAGAGTTCATTGAACACATGCAGTGTTCAGGGGTT
AAGCCGAATTTAATATCTTTTAATACTGTGATTCATGGTTATTGTCTGAGAGGGGATATT
GAAGGAGCAAATAAGATTTTTGAGGCGATGACAGCAAAAGGAATTGAGCCTGATTCGTAT
ACGTTCAATTCTCTAGTTAGAGGGATGGTGAAAGAGGGGAGGGAAAAGGAGGTCTCTTCC
TTGTTAGAGAAAATGAAACCGTTTGGGTTGATCCCTACAGCTGTGACTTACAACACTCTG
ATAGATTCATGCTGCAGTAAAGGGGACCTAGAAAAAGCATTTTTTTACCGAGATGAGATG
GTTAAGATAGGCATCGTGCCGAGTGTTGCTACCTATAACTTGTTGATCCATGCATTGTTT
CTTGATGGCAGAATGGTAGAAACTGATGATTTGCTGAAAGATATGTCGGAGAAGAGAGTA
CTTCCTGATGGTATTACATACAACATATTGATCAACGGCTATTGCAGGGTGGGAAATGCA
AAGAAGGCATTTAAGTTCTATGATGAATTGTTGAGTAGGGGTCTCCAACCAACTATTGTC
ACTTATACATCTCTAATCAAAGTCTTGGGCAAAAGGAATAGGATGAAAGAAGCAGATGAT
TTAGTTGTTGAAATATTGCGGAAAGGGATATTTCCAGATCTGATTATGTTCAATGCATTA
ATTGATGGCCATTGTGCCAATGACAACGTTGAGCGTGCTTTTGATACACTGAACGGGATG
AATAAAATGAATGTTCAGCCTGATGAAGTTACCTACAATACTCTGATGCAAGGGTATTGT
AAGAAGGGTAAAGTTGAAGAAGCTTGTATGCTTCTCGAAGAGATGAAGGGAAGAGGAATT
AAACCTGATCATATCAGCTATAACACTCTAATCAGTGGGTATAGTAGAAGAGGCGACATG
CATGATGCATTCAGAATTCGTGATGACATGTTAAGTGCAGGGTTTAACCCCACTCTTCTC
ACTTACAATGCTCTCATACAAGGTTTATGCAAAAAGCAGGAAGGTGTACTTGCTGAGGAA
CTTCTCAAAGAAATGGTTAGTAAAGGCATTACTCCTGATGATAGCACTTATCTTGCTTTG
ATTGAAGGGATTGGTGATGTTGATAATACAGATAGAGAACTCCGAGGACGGTGTCTATTG
TGGTTAATGATGGTTATAAGGGAATTAGGAAAGACATCTGCGCATGCTGATAGTTGTCAT
TTCCATAATGCTGACAACTCCTTGGTGATTCTTTGGATAAAAGGGGACTCGCGTGGCTTG
AAGTACCTGCTGAAACTGAAAGATTCACACTGTTATGGTTCATCCTTTCCAAGTGGCTTG
CATCTTCAGATTTTTTCTGATCAGATCGACATGACTGTCTGA