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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g109050.2.1
CDS Infomation

glycosyl hydrolase family protein 43 (AHRD V3.3 *** AT3G49880.1)
Sequence

ATGGCTAGATTTTCATCAAGAAACAGATGTTCATATCCTTTACTGGTTTGTATCTTGGTG
GGGTTCTTGATTTTGCTTCATTTCTCATCTTTGGGTAGTTATAGAGGTATTCAAAAAGGG
CAGATTCAAGAAAGATATGAAGAGTTGGAGGAGATCCAAATTCCTCAATCAAGTGGAAGC
CAATCCTCAGAAGCCAACATGCTAATTGATGAATTCCTTGATAAGTCTTCTAAACTCAGG
CACATTTTCTTTCCTGACATGACGACTAGCATAGACCCTAGAAAGAATACTAAAGATGAC
ACCTTTTACTATTACCCTGGGAGAATTTGGTTAGATACTGATGGGCATCCTATTCAAGCT
CATGGAGGTGGGATTCTTTATGATGAAAGATCAAGAATGTATTTTTGGTATGGAGAGTAC
AAGAATGGTCCTACTTATCAAGCTCGCGGGAAGAATGTAGCTCGAGTAGACATCATTGGT
GTTGGCTGCTACTCTTCTAAAGATTTGTGGACTTGGAAGAATGAGGGTATTGTACTAGCT
GCGGATGAACATGACGAGGATCATGACCTTCACAAGTCTAAAGTATTGGAGAGGCCTAAA
GTAATCTACAATGAGAAGACAGGTAAATATGTAATGTGGATGCACGTTGATGATTCAAAT
TATACCAAAGCCTCTGTTGGAATTGCCATAAGCAATTCCCCTACTGGTCCTTTTCGATAT
CTATACAGTAAAAGGCCTCATGGTTTTGAAAGCAGGGACATGACTTTGTTCAAAGATGAT
GATGGTAAGGCATATGTTATTTACTCCTCTGTACACAACAGGGAGCTTCATATTGGTCTT
CTTGATCAAGATTATGTAGATGTTACTAATGTTATGACAAGGGTTCTCGTGGGGCAGTAT
AGAGAGGCCCCGGCCTTGTTCAAGTACCAAGGAACTTACTACATGATCACATCAGGATGC
AGTGGTTGGGCACCAAATGAGGCACTGGCTCATGTGGCTGAATCAATTATGGGTCCATGG
GAGACTATAGGCAACCCATGTATAGGAGCTAACAAAGTTTTTCGAGTCACCACATTCTTT
GCTCAGAGCACATATGTGCTCCCCATTTTTCCTGGTTCATTTATTTTCATGGCAGATCGC
TGGAATCCAGATGATTTGGGTGATTCTAGATATATATGGCTTCCTTTAACTGTGGAGGAA
GTAGCAGGCAGTCAACGACCAAGAGTATCTATCTTTTGGCACAAAAGATGGAAGCTCTTT
AAAAGTCCAGTATAG

Peptide Sequence

PEP ID

Solyc01g109050.2.1
PEP Infomation

glycosyl hydrolase family protein 43 (AHRD V3.3 *** AT3G49880.1)
Sequence

MARFSSRNRCSYPLLVCILVGFLILLHFSSLGSYRGIQKGQIQERYEELEEIQIPQSSGS
QSSEANMLIDEFLDKSSKLRHIFFPDMTTSIDPRKNTKDDTFYYYPGRIWLDTDGHPIQA
HGGGILYDERSRMYFWYGEYKNGPTYQARGKNVARVDIIGVGCYSSKDLWTWKNEGIVLA
ADEHDEDHDLHKSKVLERPKVIYNEKTGKYVMWMHVDDSNYTKASVGIAISNSPTGPFRY
LYSKRPHGFESRDMTLFKDDDGKAYVIYSSVHNRELHIGLLDQDYVDVTNVMTRVLVGQY
REAPALFKYQGTYYMITSGCSGWAPNEALAHVAESIMGPWETIGNPCIGANKVFRVTTFF
AQSTYVLPIFPGSFIFMADRWNPDDLGDSRYIWLPLTVEEVAGSQRPRVSIFWHKRWKLF
KSPV*

Transcript Sequence

Transcript ID

Solyc01g109050.2.1
Transcript Infomation

glycosyl hydrolase family protein 43 (AHRD V3.3 *** AT3G49880.1)
Sequence

TGTTTAAGAAATTTGGCAAGTTCATACAAATATTTCCCTAGTTAGTCAACTTCAAATTTC
ACAAACTCATTTTTCCAAATTTCAACTAAAATCTACAGCCAAAAGTACAAGTCGCCATTA
ACAAAGTTCAAGGTGAACAGAGAATGAAGATAGCAGAATCAATAAAATATTTAGCTTCAA
GTTGTTTTTGTCTCGAGATCCAGGAAATACATTAAACAACTTCACTTCTGTTTTAGCCCC
AACTTTACTCCAATGTTTTTTTCTCTTCTGATACAACAACTCAGATAGATAGTTTCTGAC
CACTAACTCCAATCCCCATGGCTAGATTTTCATCAAGAAACAGATGTTCATATCCTTTAC
TGGTTTGTATCTTGGTGGGGTTCTTGATTTTGCTTCATTTCTCATCTTTGGGTAGTTATA
GAGGTATTCAAAAAGGGCAGATTCAAGAAAGATATGAAGAGTTGGAGGAGATCCAAATTC
CTCAATCAAGTGGAAGCCAATCCTCAGAAGCCAACATGCTAATTGATGAATTCCTTGATA
AGTCTTCTAAACTCAGGCACATTTTCTTTCCTGACATGACGACTAGCATAGACCCTAGAA
AGAATACTAAAGATGACACCTTTTACTATTACCCTGGGAGAATTTGGTTAGATACTGATG
GGCATCCTATTCAAGCTCATGGAGGTGGGATTCTTTATGATGAAAGATCAAGAATGTATT
TTTGGTATGGAGAGTACAAGAATGGTCCTACTTATCAAGCTCGCGGGAAGAATGTAGCTC
GAGTAGACATCATTGGTGTTGGCTGCTACTCTTCTAAAGATTTGTGGACTTGGAAGAATG
AGGGTATTGTACTAGCTGCGGATGAACATGACGAGGATCATGACCTTCACAAGTCTAAAG
TATTGGAGAGGCCTAAAGTAATCTACAATGAGAAGACAGGTAAATATGTAATGTGGATGC
ACGTTGATGATTCAAATTATACCAAAGCCTCTGTTGGAATTGCCATAAGCAATTCCCCTA
CTGGTCCTTTTCGATATCTATACAGTAAAAGGCCTCATGGTTTTGAAAGCAGGGACATGA
CTTTGTTCAAAGATGATGATGGTAAGGCATATGTTATTTACTCCTCTGTACACAACAGGG
AGCTTCATATTGGTCTTCTTGATCAAGATTATGTAGATGTTACTAATGTTATGACAAGGG
TTCTCGTGGGGCAGTATAGAGAGGCCCCGGCCTTGTTCAAGTACCAAGGAACTTACTACA
TGATCACATCAGGATGCAGTGGTTGGGCACCAAATGAGGCACTGGCTCATGTGGCTGAAT
CAATTATGGGTCCATGGGAGACTATAGGCAACCCATGTATAGGAGCTAACAAAGTTTTTC
GAGTCACCACATTCTTTGCTCAGAGCACATATGTGCTCCCCATTTTTCCTGGTTCATTTA
TTTTCATGGCAGATCGCTGGAATCCAGATGATTTGGGTGATTCTAGATATATATGGCTTC
CTTTAACTGTGGAGGAAGTAGCAGGCAGTCAACGACCAAGAGTATCTATCTTTTGGCACA
AAAGATGGAAGCTCTTTAAAAGTCCAGTATAGAAGAATGAATGCTTATAGTTTTCTCATC
ATAGAGCAAGTTGCTAGCTTTTTGTGGATTATTAGAACTAATGTGAAGTGATTACAAGAA
CATCTATTAGAATAACTTTTACCTAATTGGAACTTGCATTACA