Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g108600.3.1
CDS Infomation	presequence protease 2 (AHRD V3.3 *** AT1G49630.3)
Sequence	ATGGAGAGAGCGGTGCTTCTTCGCTCTCTATCTTCTACTTCCACTCTCGCTTTCTCTAGA ATCTTCTCACGCTCTTCACACAGATTCGCTTCTTACTCAGCTAGACGACACCGTTTACTC CAGAATCTTCAACGCCGGCGTTCACTTGTTCGGAGTAACGTTCGCGGAATATCATCTTCA ATCAACTTGAAAAGACAGTTTTACCCTTTATCTGTTCGAGCTATCGCTACTTCTTCCCCT CAATCATCTCAAGAGTTTCTTGGTGCTGATGATGAAGTTGCGGAGAAATTCGGGTTCGAG AAAGTGTCTGAGCAGTTTATTGATGAGTGTAAATCTAAAGCTGTATTGTATAAACACAAG AAAACAGGCGCTGAAGTAATGTCGGTTTCCAATGACGATGAGAATAAAGTTTTCGGTGTT GTCTTCCGGACACCTCCGAAAGATTCTACTGGAATTCCTCACATATTAGAACATAGTGTA CTGTGCGGTTCAAGAAAGTATCCCCTGAAAGAACCATTTGTTGAACTGTTGAAGGGAAGC TTGAACACTTTTCTGAATGCTTTCACATATCCAGATAGGACATGTTATCCTGTGGCGTCC ACAAATACAAAGGATTTCTACAACCTGGTTGATGTGTACTTAGATGCTGTCTTTTTCCCT AAATGTGTGGAGGATTTCCAAACATTTCAACAAGAGGGTTGGCATTATGAACTGAATGAC CCCTCAGATGAAATTACTTTTAAAGGGGTTGTGTTCAATGAGATGAAGGGAGTTTATTCT CAGCCTGATAATCTACTGGGACGAACTTCCCAGCAGGCGCTTTTTCCTGATAATACCTAT GGTGTTGACAGTGGTGGTGACCCACGAGTGATTCCTAGCCTTTCTTTTGAGGATTTCAAG GAGTTCCACAGAAAATTTTACCATCCTAGCAATGCAAGAATATGGTTTTATGGAGACGAT GACCCAAATGAACGTCTGCGGATCTTAAGTGAGTATTTGAACATGTTTGATGCTAGTTCA GCTCCACACGAATCAAGAGTTGAACCACAAAGACTATTCTCGGAGCCGGTCAGGATTGTA GAAAAATATCCCGTTGGGGAAGATGGGGACCTGAAAAAGAAGCACATGGTGTGCGTTAAT TGGCTGCTATCTGACAAGCCACTGGATTTGGAAACTGAGCTTGCCCTAGGATTTCTGGAT CATCTGCTTTTGGGAACTCCAGCTTCTCCCTTGAGGAAGATCTTGCTAGAAAGTGGTTTA GGAGATGCTATTGTTGGTGGAGGGATTGAGGATGAGCTCCTTCAGCCTCAGTTTAGCATT GGGTTGAAGGGTGTCTCAGAAGAGAACATTCAAAAGGTTGAAGAATTGATTATGAGCACC CTACAAGGCTTAGCTGAGAAAGGTTTTGATTCGGATGCCGTGGAGGCATCAATGAACACA ATTGAATTTTCTCTTAGAGAAAATAACACTGGCTCATTCCCACGTGGTTTAGCATTGATG CTCCGCTCCATTGGGAAATGGGTTTATGACATGGATCCATTTGAACCACTGAAGTATCAG AAGCCTTTGGAGGCCCTGAAAGCCAGAATAGCTAAGGAAGGCTCCAAAGCTGTTTTTGCT CCTTTAATGGACCAATACATTTTGAGGAATCCACACCGTGTAACGGTTGAGATGCAGCCT GACCCAGAGAAGGCATCTCGTGAAGAACAAATAGAAAAGGAAACACTGGATAAAGTTAAA GCAAGCATGACCCAAGAGGATCTTGCTGAACTGGCTCGAGCAACACATGAGCTACGGTTA AAGCAAGAAACTCCTGACCCACCAGAAGCTCTAAAGAGTGTTCCCAGCCTCTCTCTACAA GATATTCCTCGAGAACCTGTCCTAGTTCCAACTGAGATTGGAGACATCAATGGGGTAAAA GTTTTGAAGCACGACCTCTTCACAAACGATGTTCTTTATGCTGAAGTTGTCTTCAACTTG AGCTCATTGAAGCAAGAGCTGCTACCATTAGTCCCACTTTTCTGTCAGTCTCTGCTGGAG ATGGGCACAAAGGATTTAGACTTTGTGCAGTTGAACCAGTTAATTGGAAGGAAAACTGGA GGGCTATCAGTCTATCCTTTCACCTCATCCGTGCATGGCAAGGTGGAGCCATGTAGCAAG ATAATAGTTCGAGGCAAAGCCATGTCACAACGTACAGAAGATTTATTTTACTTGATCAAC CGCGTTCTTCAAGATGTCCAGCTTGATGACCAAAAGCGTTTCAAGCAGTTCGTTTCTCAA AGCAGATCGAGAATGGAGAATCGTCTAAGAGGCAGTGGTCATAGCGTTGCTGCTGCAAGG ATGGGTGCTAAGCTTAACGTTGCAGGGTGGATATCTGAACAAATGGGTGGTGTTAGCTAC TTGGAATTTCTGAAGGTTCTTGAAGACCAAGTTGAGAAGGATTGGTCCCAAATATCATCA TCCCTTGAGGAGATCCGAAAATCTTTACTTTCCAAGAATGGGTGTCTGATAAATTTGACA GCTGATGGGAAGAATCTCAACAACGCGGAGAAACATATTAGCAAATTTCTTGATTTGCTT CCAAGCACATCTCTAGTGGAGCCAGCTGCTTGGAATGCACAGTTGTCTCGCTCAAATGAA GCTTTTGTTGTTCCTACTCAGGTGAATTATGTTGGAAAAGCAGCTAATCTGTATGAAGCT GGTTATGAGCTTAAAGGCAGTGCTTATGTTATTTCTAATTATACAAGTAATACATGGCTC TGGGATCGTGTACGTGTTAGTGGTGGAGCTTATGGAGGATTTTGTAGTTTTGACTCCCAT TCAGGGGTATTCTCATTTTTATCCTACCGAGACCCAAATTTATTGAAGACACTTGATGTG TATGACGGAACCAGTAGTTTCCTTAAAGAACTTGAAATGGATAATGATGCACTCACAAAG GCAATTATTGGGACTATTGGAGATGTAGATTCTTACCAGTTGCCTGATGCCAAAGGGTAC AGTAGTTTATTACGATATTTACTGGGAGTAACAGATGAAGAAAGACAAAGGAGACGTGAG GAGATATTATCAACAAGTCTGGAAGATTTCAGGAAATTTGGAGACGTCATGGAGGCAGTT AAAGATAAAGGGGTGGTTGTTGCTGTAGCATCACCAGATGATGTTGAGGCAGCCAACAAG GAGCGTTCTAACTTCTTGGAAGTCAAGAAAGCACTCTGA

Peptide Sequence

PEP ID	Solyc01g108600.3.1
PEP Infomation	presequence protease 2 (AHRD V3.3 *** AT1G49630.3)
Sequence	MERAVLLRSLSSTSTLAFSRIFSRSSHRFASYSARRHRLLQNLQRRRSLVRSNVRGISSS INLKRQFYPLSVRAIATSSPQSSQEFLGADDEVAEKFGFEKVSEQFIDECKSKAVLYKHK KTGAEVMSVSNDDENKVFGVVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGS LNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYLDAVFFPKCVEDFQTFQQEGWHYELND PSDEITFKGVVFNEMKGVYSQPDNLLGRTSQQALFPDNTYGVDSGGDPRVIPSLSFEDFK EFHRKFYHPSNARIWFYGDDDPNERLRILSEYLNMFDASSAPHESRVEPQRLFSEPVRIV EKYPVGEDGDLKKKHMVCVNWLLSDKPLDLETELALGFLDHLLLGTPASPLRKILLESGL GDAIVGGGIEDELLQPQFSIGLKGVSEENIQKVEELIMSTLQGLAEKGFDSDAVEASMNT IEFSLRENNTGSFPRGLALMLRSIGKWVYDMDPFEPLKYQKPLEALKARIAKEGSKAVFA PLMDQYILRNPHRVTVEMQPDPEKASREEQIEKETLDKVKASMTQEDLAELARATHELRL KQETPDPPEALKSVPSLSLQDIPREPVLVPTEIGDINGVKVLKHDLFTNDVLYAEVVFNL SSLKQELLPLVPLFCQSLLEMGTKDLDFVQLNQLIGRKTGGLSVYPFTSSVHGKVEPCSK IIVRGKAMSQRTEDLFYLINRVLQDVQLDDQKRFKQFVSQSRSRMENRLRGSGHSVAAAR MGAKLNVAGWISEQMGGVSYLEFLKVLEDQVEKDWSQISSSLEEIRKSLLSKNGCLINLT ADGKNLNNAEKHISKFLDLLPSTSLVEPAAWNAQLSRSNEAFVVPTQVNYVGKAANLYEA GYELKGSAYVISNYTSNTWLWDRVRVSGGAYGGFCSFDSHSGVFSFLSYRDPNLLKTLDV YDGTSSFLKELEMDNDALTKAIIGTIGDVDSYQLPDAKGYSSLLRYLLGVTDEERQRRRE EILSTSLEDFRKFGDVMEAVKDKGVVVAVASPDDVEAANKERSNFLEVKKAL*

Transcript Sequence

Transcript ID	Solyc01g108600.3.1
Transcript Infomation	presequence protease 2 (AHRD V3.3 *** AT1G49630.3)
Sequence	CATAATCTAGATTTTTTTTAAAATCACAATCAATAAGGGAAAAGTGTGATATTCAAGTAG GAGGATAACAAATTCCTTGAATTCATAAATAACCTAAATAAGTTTAAAACAACATATACT GAGGAAGAAACATCTTACTAAAATGTTATACTATATAAATATATTTAAATATTTATTATT TAATTCGATATATAACTTAATTTTATTTTTTTTAATAATAAAATCTTTAAAAGATATTAT TCAAATTTAGATATATAATGGGTTTATCTCTCCATTTTTTACAATTTTTTTTTAATCAAT GTAAAACTAAGTACCTTAATTTTGACTAGAAATTTGGATAAAATTAACCATAAAATTTTA TGCTTCTTTTAATTATTTTCCTCTAATTTGGGAGGTAGAGAAGGTTGCAAAATGGCTTAA TAACTCTCCACAAAAATAATTTTGTGCAAACACGAAAATTTGGAAATAACCAAAATTCAT TTTAGACCGTTCACTACTAAAACCCCCTTTGATATTTCTATATAGTATATCGTTCTGACC ATAAACCCCATCTTCTTCTTCACACACTTCCTTTCTTTTATCTTTCTCCGCAAGACATCA ATGGAGAGAGCGGTGCTTCTTCGCTCTCTATCTTCTACTTCCACTCTCGCTTTCTCTAGA ATCTTCTCACGCTCTTCACACAGATTCGCTTCTTACTCAGCTAGACGACACCGTTTACTC CAGAATCTTCAACGCCGGCGTTCACTTGTTCGGAGTAACGTTCGCGGAATATCATCTTCA ATCAACTTGAAAAGACAGTTTTACCCTTTATCTGTTCGAGCTATCGCTACTTCTTCCCCT CAATCATCTCAAGAGTTTCTTGGTGCTGATGATGAAGTTGCGGAGAAATTCGGGTTCGAG AAAGTGTCTGAGCAGTTTATTGATGAGTGTAAATCTAAAGCTGTATTGTATAAACACAAG AAAACAGGCGCTGAAGTAATGTCGGTTTCCAATGACGATGAGAATAAAGTTTTCGGTGTT GTCTTCCGGACACCTCCGAAAGATTCTACTGGAATTCCTCACATATTAGAACATAGTGTA CTGTGCGGTTCAAGAAAGTATCCCCTGAAAGAACCATTTGTTGAACTGTTGAAGGGAAGC TTGAACACTTTTCTGAATGCTTTCACATATCCAGATAGGACATGTTATCCTGTGGCGTCC ACAAATACAAAGGATTTCTACAACCTGGTTGATGTGTACTTAGATGCTGTCTTTTTCCCT AAATGTGTGGAGGATTTCCAAACATTTCAACAAGAGGGTTGGCATTATGAACTGAATGAC CCCTCAGATGAAATTACTTTTAAAGGGGTTGTGTTCAATGAGATGAAGGGAGTTTATTCT CAGCCTGATAATCTACTGGGACGAACTTCCCAGCAGGCGCTTTTTCCTGATAATACCTAT GGTGTTGACAGTGGTGGTGACCCACGAGTGATTCCTAGCCTTTCTTTTGAGGATTTCAAG GAGTTCCACAGAAAATTTTACCATCCTAGCAATGCAAGAATATGGTTTTATGGAGACGAT GACCCAAATGAACGTCTGCGGATCTTAAGTGAGTATTTGAACATGTTTGATGCTAGTTCA GCTCCACACGAATCAAGAGTTGAACCACAAAGACTATTCTCGGAGCCGGTCAGGATTGTA GAAAAATATCCCGTTGGGGAAGATGGGGACCTGAAAAAGAAGCACATGGTGTGCGTTAAT TGGCTGCTATCTGACAAGCCACTGGATTTGGAAACTGAGCTTGCCCTAGGATTTCTGGAT CATCTGCTTTTGGGAACTCCAGCTTCTCCCTTGAGGAAGATCTTGCTAGAAAGTGGTTTA GGAGATGCTATTGTTGGTGGAGGGATTGAGGATGAGCTCCTTCAGCCTCAGTTTAGCATT GGGTTGAAGGGTGTCTCAGAAGAGAACATTCAAAAGGTTGAAGAATTGATTATGAGCACC CTACAAGGCTTAGCTGAGAAAGGTTTTGATTCGGATGCCGTGGAGGCATCAATGAACACA ATTGAATTTTCTCTTAGAGAAAATAACACTGGCTCATTCCCACGTGGTTTAGCATTGATG CTCCGCTCCATTGGGAAATGGGTTTATGACATGGATCCATTTGAACCACTGAAGTATCAG AAGCCTTTGGAGGCCCTGAAAGCCAGAATAGCTAAGGAAGGCTCCAAAGCTGTTTTTGCT CCTTTAATGGACCAATACATTTTGAGGAATCCACACCGTGTAACGGTTGAGATGCAGCCT GACCCAGAGAAGGCATCTCGTGAAGAACAAATAGAAAAGGAAACACTGGATAAAGTTAAA GCAAGCATGACCCAAGAGGATCTTGCTGAACTGGCTCGAGCAACACATGAGCTACGGTTA AAGCAAGAAACTCCTGACCCACCAGAAGCTCTAAAGAGTGTTCCCAGCCTCTCTCTACAA GATATTCCTCGAGAACCTGTCCTAGTTCCAACTGAGATTGGAGACATCAATGGGGTAAAA GTTTTGAAGCACGACCTCTTCACAAACGATGTTCTTTATGCTGAAGTTGTCTTCAACTTG AGCTCATTGAAGCAAGAGCTGCTACCATTAGTCCCACTTTTCTGTCAGTCTCTGCTGGAG ATGGGCACAAAGGATTTAGACTTTGTGCAGTTGAACCAGTTAATTGGAAGGAAAACTGGA GGGCTATCAGTCTATCCTTTCACCTCATCCGTGCATGGCAAGGTGGAGCCATGTAGCAAG ATAATAGTTCGAGGCAAAGCCATGTCACAACGTACAGAAGATTTATTTTACTTGATCAAC CGCGTTCTTCAAGATGTCCAGCTTGATGACCAAAAGCGTTTCAAGCAGTTCGTTTCTCAA AGCAGATCGAGAATGGAGAATCGTCTAAGAGGCAGTGGTCATAGCGTTGCTGCTGCAAGG ATGGGTGCTAAGCTTAACGTTGCAGGGTGGATATCTGAACAAATGGGTGGTGTTAGCTAC TTGGAATTTCTGAAGGTTCTTGAAGACCAAGTTGAGAAGGATTGGTCCCAAATATCATCA TCCCTTGAGGAGATCCGAAAATCTTTACTTTCCAAGAATGGGTGTCTGATAAATTTGACA GCTGATGGGAAGAATCTCAACAACGCGGAGAAACATATTAGCAAATTTCTTGATTTGCTT CCAAGCACATCTCTAGTGGAGCCAGCTGCTTGGAATGCACAGTTGTCTCGCTCAAATGAA GCTTTTGTTGTTCCTACTCAGGTGAATTATGTTGGAAAAGCAGCTAATCTGTATGAAGCT GGTTATGAGCTTAAAGGCAGTGCTTATGTTATTTCTAATTATACAAGTAATACATGGCTC TGGGATCGTGTACGTGTTAGTGGTGGAGCTTATGGAGGATTTTGTAGTTTTGACTCCCAT TCAGGGGTATTCTCATTTTTATCCTACCGAGACCCAAATTTATTGAAGACACTTGATGTG TATGACGGAACCAGTAGTTTCCTTAAAGAACTTGAAATGGATAATGATGCACTCACAAAG GCAATTATTGGGACTATTGGAGATGTAGATTCTTACCAGTTGCCTGATGCCAAAGGGTAC AGTAGTTTATTACGATATTTACTGGGAGTAACAGATGAAGAAAGACAAAGGAGACGTGAG GAGATATTATCAACAAGTCTGGAAGATTTCAGGAAATTTGGAGACGTCATGGAGGCAGTT AAAGATAAAGGGGTGGTTGTTGCTGTAGCATCACCAGATGATGTTGAGGCAGCCAACAAG GAGCGTTCTAACTTCTTGGAAGTCAAGAAAGCACTCTGATTCTGATCAAGTCTTTCTCGG AAAATGCTTGTATGCATTATTTGCTGTTAGAATCCTCAATCCCGATAAGTGGTATAGTTT AGCTCAGCTGGATATTAATAGACCCCAATGGGTTTTTAACTCATTTCAATCTTTTTACAG GACGGTCATTATGGGCGAGTCAAAAATCGGTTGTAATTGCTATTGCAAATGCCCGGTGGT TGTTTGATTGGAATTAGGTTATTCAA