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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g108500.3.1
CDS Infomation

RNA-binding protein (AHRD V3.3 *** A0A0K9NR72_ZOSMR)
Sequence

ATGATGTATGGTCAGCAATACATGCCTTACTACCATCAACAGAAGATGCAACAGCCGCCG
ACTCAGATTCAGAACTCATCTGAAGATAACAAAACGATCTGGATTGGTGATCTTCAACAG
TGGATGGATGAGAGTTATCTTCATTCATGCTTTTCTCATGCTGGCGAGGTTATTTCTGTG
AAAATTATTCGAAACAAGCAAACTGGTCAGTCAGAGCGTTATGGATTTGTTGAGTTCAAT
AGTCACGCAGCAGCGGAGAAAGTGCTACAGAGCTACAATGGCACAATGATGCCAAATGCC
GAGCAACCTTTCCGCTTAAATTGGGCAGCCTTCAGCGCTGGTGAAAAGCGTGCAGAAACT
GGTTCTGATTTCTCAATTTTTGTAGGAGATTTGGCCTCTGATGTTACTGACACAATGTTA
CGTGACACATTCGCTAGTAGATATCCATCTGTTAAAGGTGCAAAAGTAGTAGTAGATGCG
AACACAGGCCACTCAAAAGGCTATGGCTTTGTAAGGTTTGGTGATGAAAGCGAGAGGTCT
CGGGCCATGACTGAAATGAATGGTATATATTGTTCCAGCAGGCCCATGCGTGTTGGTGTT
GCTACCCCAAAGAAACCATCAGCACAGCAACAATTTTCTTCTCAAGCTGTGATATTATCT
GGTGGATATGCATCAAATGGTGCTGCAACCCATGGATCCCAGTCTGATGGTGATTCATCA
AACACGACAATTTTTGTTGGAGGACTTGATTCTGATGTCACTGACGAGGAACTGAGGCAG
TCCTTTACTCAGTTTGGGGAAGTGGTCTCTGTGAAAATACCTGCCGGAAAAGGATGTGGT
TTTGTACAATTTTCTGACAGGAGCTCTGCTCAGGAGGCGATACAAAAATTGAGTGGGGCT
GTAATTGGCAAGCAGGCAGTTCGTCTTTCCTGGGGGCGAAGTCCATCAAACAAGCAGATG
AGAAGTGATTCTGGTAATGGGGGCGGCTATTATGGAAGGCAAAATTATGGAGGATATGGA
TATGGCGCATCACAAAATCAGGATTCTGGCATGTATGCTGCTGGAGCAGCCTCTAATGGC
TACGGGAATCAGCAGCCTGTTAGCTGA

Peptide Sequence

PEP ID

Solyc01g108500.3.1
PEP Infomation

RNA-binding protein (AHRD V3.3 *** A0A0K9NR72_ZOSMR)
Sequence

MMYGQQYMPYYHQQKMQQPPTQIQNSSEDNKTIWIGDLQQWMDESYLHSCFSHAGEVISV
KIIRNKQTGQSERYGFVEFNSHAAAEKVLQSYNGTMMPNAEQPFRLNWAAFSAGEKRAET
GSDFSIFVGDLASDVTDTMLRDTFASRYPSVKGAKVVVDANTGHSKGYGFVRFGDESERS
RAMTEMNGIYCSSRPMRVGVATPKKPSAQQQFSSQAVILSGGYASNGAATHGSQSDGDSS
NTTIFVGGLDSDVTDEELRQSFTQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGA
VIGKQAVRLSWGRSPSNKQMRSDSGNGGGYYGRQNYGGYGYGASQNQDSGMYAAGAASNG
YGNQQPVS*

Transcript Sequence

Transcript ID

Solyc01g108500.3.1
Transcript Infomation

RNA-binding protein (AHRD V3.3 *** A0A0K9NR72_ZOSMR)
Sequence

GCAACAGATGATGTATGGTCAGCAATACATGCCTTACTACCATCAACAGAAGATGCAACA
GCCGCCGACTCAGATTCAGAACTCATCTGAAGATAACAAAACGATCTGGATTGGTGATCT
TCAACAGTGGATGGATGAGAGTTATCTTCATTCATGCTTTTCTCATGCTGGCGAGGTTAT
TTCTGTGAAAATTATTCGAAACAAGCAAACTGGTCAGTCAGAGCGTTATGGATTTGTTGA
GTTCAATAGTCACGCAGCAGCGGAGAAAGTGCTACAGAGCTACAATGGCACAATGATGCC
AAATGCCGAGCAACCTTTCCGCTTAAATTGGGCAGCCTTCAGCGCTGGTGAAAAGCGTGC
AGAAACTGGTTCTGATTTCTCAATTTTTGTAGGAGATTTGGCCTCTGATGTTACTGACAC
AATGTTACGTGACACATTCGCTAGTAGATATCCATCTGTTAAAGGTGCAAAAGTAGTAGT
AGATGCGAACACAGGCCACTCAAAAGGCTATGGCTTTGTAAGGTTTGGTGATGAAAGCGA
GAGGTCTCGGGCCATGACTGAAATGAATGGTATATATTGTTCCAGCAGGCCCATGCGTGT
TGGTGTTGCTACCCCAAAGAAACCATCAGCACAGCAACAATTTTCTTCTCAAGCTGTGAT
ATTATCTGGTGGATATGCATCAAATGGTGCTGCAACCCATGGATCCCAGTCTGATGGTGA
TTCATCAAACACGACAATTTTTGTTGGAGGACTTGATTCTGATGTCACTGACGAGGAACT
GAGGCAGTCCTTTACTCAGTTTGGGGAAGTGGTCTCTGTGAAAATACCTGCCGGAAAAGG
ATGTGGTTTTGTACAATTTTCTGACAGGAGCTCTGCTCAGGAGGCGATACAAAAATTGAG
TGGGGCTGTAATTGGCAAGCAGGCAGTTCGTCTTTCCTGGGGGCGAAGTCCATCAAACAA
GCAGATGAGAAGTGATTCTGGTAATGGGGGCGGCTATTATGGAAGGCAAAATTATGGAGG
ATATGGATATGGCGCATCACAAAATCAGGATTCTGGCATGTATGCTGCTGGAGCAGCCTC
TAATGGCTACGGGAATCAGCAGCCTGTTAGCTGA