Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g108410.2.1
CDS Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XM66_CYNCS)
Sequence	ATGACTGAAATCATGCTGTCTCAAGTAATACACATTCCACAATCAATGGGAATGAGCAAT ATTGACATGATGTCTGACCAGCTAATTAGCATTGGGACTTTTATGTTTGTACAAGTGTTG ATTGCTGGCTTAAAACCTGTCGCCGTAACTCCGGTTGTAGCTTTTTCCGACATGCTACTT GTTAAACCCTACCGGAGAGCCCTCCATAGTTCAACTCGGCAAGTCCAATGCAAAACCCTA GACTCACCATCTCCTTCCTCCACCACCCTTTTTGTCGACAGGGCTGTATCCATTCTTAAA GGATACGACCCAATTTCCTTGGACTCCATTTCTTCCCAATTCACCCCTCAATATGCTTCT TCCGTGCTTTTCCAATGCCGATTCGATAAACCCCTTGTTCTAAGATTCATCAACTGGGCA CGCAACCGCCAATTCTTCAATCTTCAATGCAAGTGTATTTCCATTCATATCCTCACTCGT TTCAAGCTTTACAAGACTGCCCAATCCCTGGCAGAGGATGTTGCTTTGAAATTCGGCGAT AACAAGGGTGAATTGGTCTTTTCATGTCTCAGGGACACTTACTATTCTTGCAAGTCCAGC TCTGCTGTGTTCGATTTGATGGTAAAATCCTACTCTCATTTGAAAATGATTGACAGAGCT ATGAATATCTTTGAATTAGCCAAGTTTAATGGGTTTATGCTCACTGTTTTGTCCTATAAT TCCATTCTTGATGCGTTGATCAGGGTTTCATATAATGGGTCTTTCGAATTAGCTCAAAAG TTTTATGATGATATGGTTCAATCTGGGGTTTCACCTAATGTGTATACTTATAACATTATG ATCCGAGGCCTTTGTGCAAAAGGGGAGTTGCAAAAGAGTTTGGTTGTTTTCAATGAAATG GAAAAAAATGGCTGCTTGCGAAACGTTGTAACCTATAACACTATCATAGGTGGTTATTGT AAGATAGGTAAGGTTGATGAGGCAGTCAAATTGTTGAAGCTAATGCAAGTGAGGAGCTTG GAACCAAGTGTGGTCACATATAATGCTATTATTAATGGGTTGTGTCGAGAAGGTAGAATG AAAGAGACAAGTGAGATTTTGGAAGAGATGAGGGGAAAGGGATTAATGCCTGATGAAGTA ACCTATAACACACTGGTAAATGGCTATTGTAGAGAGGGTAACTTTCACCAAGCACTTGTT TTGCACTCGGAAATGTTGAGGAATGGGCTGTCTCCAGATGTTGTGACTTATACTTCTTTG ATTAATAGCATGTGCAAGACTGGGAATTTGCACCGTGCAATGGAATTCTTTGATCAACTG CATGCTAGGGGATTATATCCCAACGATAGAACTTACACAACATTGATTGTTGGTTTTTCT CAGCAGGGTCTTATGAATGAGGCTTATAAGCTGTTGAATGAAATGATTTCAAATGGCTTT TCCCCTTCAATTGTAACTTACAATGCGTTAATTAATGGGCATTGTGCAGTGGGCAGGATG GAAGATGCTTTACGTGTGACTCAAGAGATGGAACAGAGAAGGCTGGTCCCAGATGTTGTA ACTTATAGTACAATAATATCTGGGTTCTGTAGAAACTGTGGGTTGGAAAGAGCATTCTGT GTTAAGCAGCAGATGGTTGAAAAAGGGGTTTTACCTGATGTTATTACTTATTCATCCCTA ATTCAAGGTCTTTGTGAGCAGCGAAGACTGACTGAAGCTTTCGAACTTTTCCAAGAGATG TTCAGAGTAGGTCTGCAACCAGATAAGTTTACATATACTACACTTATTGGTGCATACTGT GCAAATGGGGATATTAAAGGTGCTTTTCACCTGCATAACAAAATGATCTATAAGGGTTGC TTTCCTGATGTCGTCACTTACAATGTCCTAATCAATGGGCTTAACAAACAAGCTCGCACT AGGGAAGCAAAGCGGCTTCTGTTCAAGTTGTTGTATGAGCAATCAGTGCCAAATTGTGTC ACTTATGACATGCTAATAGAAAGTTGCAAGGATCTTGAATTGAAGAGTGCGTTAGATCTT ATTAAAGGATTCTGCATGAAAGGTCTGTTGAATGAAGCTGACCAAGTTTTTGAGTTGATG CTGCAAAAACACAAGAAGCCGAGTGAAGTAGCTTATAGCCTACTTATACACGGTCATTCC AGGGGTGGGAATTTGCATAGAGCCTTGAATCTTTTCAGAGAAATGGCTAATCTTGGATTT ATTCCTCATACAGTAAGTATTATTGTGCTCATGAAAGAACTTTTTAAAGAAGGGATGAGC GAGGAATTACATCAAGTAATTCAAAGCACATTGGAAACCTGTAAACTTGCCGATGGTGAG CTAGCAAAAGTTATTGTTGAGGTGAACTACAAGGAAGGGAACATGGATGCGGTTTCTCAT GACATTGTGAATGTGGAAGGTCATATTTTGAACTCCGATGAGCGACATTCTCTCGAGAGG GTTAAATTCCCACTTTGCTTGAAAATTGTAGGCTTCTCACAGGAAGCGACAGGGTGTCTT CATATTTCCCCACAAAAGACTGTTTGCAAGTTCATCCAGAAGTTACATTTGATTGATTTG CTTCCTATGGAGCATCTGTTCCATGTGCATCATAGCTTGTTTCTAAGTGTTGTTATTCAG TTCAGTGTTTCCTCTAGATTGGGCATGAAGGAAATTTCTCTGTTTTTCATGAATAATCGC TTTGTGCAGAAGGGTTGTAAGAAAATGACAAGATATGAAGTAAGTAAACCATCAAATGGT AATACACACCAGAGAATGGTGGGTGGTCCGCCAGTGGAAACCATTCTTTGGAGAAATGGG TCACCTGAAAAACCAGTGCTCTGCAATGCATGTGGATCAAGATGGCGGGGTAGAAGGACA CTAGATGGCTATATTCCCAGACATGGAAACATAGAAATAGAGAACTATCTGCTCCCTTAT GACATGAAGCCGGCCCGTGAAGGAAAAAAGTTAGAAGTTGGAATAGAGGTTTCTGGACAG GATGGCTCTTCAGCTTGTCTTGAAGAGGAAATGAATAACATATCAAGCTTATGTTTAGCA GGATCATCCTCAGAAAACTGCATGCAGATGGAAGAAACAAATGAAGCATACAAAGGTTCT CTATGGAATCCTGACAGTGTCCCAAGAAGAAAAAGATCAGAGCGTAGAAAATGCATTTTG TCACCTATTGAAAGATTCCAGAGGCAACTTCATAACATTCTACAGGAGCCAGACTTTGAA AATATCTCTGCAGACGATGAAAATATTCTAGTATATGCAAGGAACAAACACTTTCCTCCT AATGAGATTGGTCTTGGAGCTATGCTTCCACCTACTGCTACAAAACACTTGACAACTCTA TCTCCATTGGCAGAAGATAATGATGCCTCTTGCTCAGTGAATGTTCCTGTAGGAAATTCC AATTCCAATTTGTAA

Peptide Sequence

PEP ID	Solyc01g108410.2.1
PEP Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XM66_CYNCS)
Sequence	MTEIMLSQVIHIPQSMGMSNIDMMSDQLISIGTFMFVQVLIAGLKPVAVTPVVAFSDMLL VKPYRRALHSSTRQVQCKTLDSPSPSSTTLFVDRAVSILKGYDPISLDSISSQFTPQYAS SVLFQCRFDKPLVLRFINWARNRQFFNLQCKCISIHILTRFKLYKTAQSLAEDVALKFGD NKGELVFSCLRDTYYSCKSSSAVFDLMVKSYSHLKMIDRAMNIFELAKFNGFMLTVLSYN SILDALIRVSYNGSFELAQKFYDDMVQSGVSPNVYTYNIMIRGLCAKGELQKSLVVFNEM EKNGCLRNVVTYNTIIGGYCKIGKVDEAVKLLKLMQVRSLEPSVVTYNAIINGLCREGRM KETSEILEEMRGKGLMPDEVTYNTLVNGYCREGNFHQALVLHSEMLRNGLSPDVVTYTSL INSMCKTGNLHRAMEFFDQLHARGLYPNDRTYTTLIVGFSQQGLMNEAYKLLNEMISNGF SPSIVTYNALINGHCAVGRMEDALRVTQEMEQRRLVPDVVTYSTIISGFCRNCGLERAFC VKQQMVEKGVLPDVITYSSLIQGLCEQRRLTEAFELFQEMFRVGLQPDKFTYTTLIGAYC ANGDIKGAFHLHNKMIYKGCFPDVVTYNVLINGLNKQARTREAKRLLFKLLYEQSVPNCV TYDMLIESCKDLELKSALDLIKGFCMKGLLNEADQVFELMLQKHKKPSEVAYSLLIHGHS RGGNLHRALNLFREMANLGFIPHTVSIIVLMKELFKEGMSEELHQVIQSTLETCKLADGE LAKVIVEVNYKEGNMDAVSHDIVNVEGHILNSDERHSLERVKFPLCLKIVGFSQEATGCL HISPQKTVCKFIQKLHLIDLLPMEHLFHVHHSLFLSVVIQFSVSSRLGMKEISLFFMNNR FVQKGCKKMTRYEVSKPSNGNTHQRMVGGPPVETILWRNGSPEKPVLCNACGSRWRGRRT LDGYIPRHGNIEIENYLLPYDMKPAREGKKLEVGIEVSGQDGSSACLEEEMNNISSLCLA GSSSENCMQMEETNEAYKGSLWNPDSVPRRKRSERRKCILSPIERFQRQLHNILQEPDFE NISADDENILVYARNKHFPPNEIGLGAMLPPTATKHLTTLSPLAEDNDASCSVNVPVGNS NSNL*

Transcript Sequence

Transcript ID	Solyc01g108410.2.1
Transcript Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XM66_CYNCS)
Sequence	ATGACTGAAATCATGCTGTCTCAAGTAATACACATTCCACAATCAATGGGAATGAGCAAT ATTGACATGATGTCTGACCAGCTAATTAGCATTGGGACTTTTATGTTTGTACAAGTGTTG ATTGCTGGCTTAAAACCTGTCGCCGTAACTCCGGTTGTAGCTTTTTCCGACATGCTACTT GTTAAACCCTACCGGAGAGCCCTCCATAGTTCAACTCGGCAAGTCCAATGCAAAACCCTA GACTCACCATCTCCTTCCTCCACCACCCTTTTTGTCGACAGGGCTGTATCCATTCTTAAA GGATACGACCCAATTTCCTTGGACTCCATTTCTTCCCAATTCACCCCTCAATATGCTTCT TCCGTGCTTTTCCAATGCCGATTCGATAAACCCCTTGTTCTAAGATTCATCAACTGGGCA CGCAACCGCCAATTCTTCAATCTTCAATGCAAGTGTATTTCCATTCATATCCTCACTCGT TTCAAGCTTTACAAGACTGCCCAATCCCTGGCAGAGGATGTTGCTTTGAAATTCGGCGAT AACAAGGGTGAATTGGTCTTTTCATGTCTCAGGGACACTTACTATTCTTGCAAGTCCAGC TCTGCTGTGTTCGATTTGATGGTAAAATCCTACTCTCATTTGAAAATGATTGACAGAGCT ATGAATATCTTTGAATTAGCCAAGTTTAATGGGTTTATGCTCACTGTTTTGTCCTATAAT TCCATTCTTGATGCGTTGATCAGGGTTTCATATAATGGGTCTTTCGAATTAGCTCAAAAG TTTTATGATGATATGGTTCAATCTGGGGTTTCACCTAATGTGTATACTTATAACATTATG ATCCGAGGCCTTTGTGCAAAAGGGGAGTTGCAAAAGAGTTTGGTTGTTTTCAATGAAATG GAAAAAAATGGCTGCTTGCGAAACGTTGTAACCTATAACACTATCATAGGTGGTTATTGT AAGATAGGTAAGGTTGATGAGGCAGTCAAATTGTTGAAGCTAATGCAAGTGAGGAGCTTG GAACCAAGTGTGGTCACATATAATGCTATTATTAATGGGTTGTGTCGAGAAGGTAGAATG AAAGAGACAAGTGAGATTTTGGAAGAGATGAGGGGAAAGGGATTAATGCCTGATGAAGTA ACCTATAACACACTGGTAAATGGCTATTGTAGAGAGGGTAACTTTCACCAAGCACTTGTT TTGCACTCGGAAATGTTGAGGAATGGGCTGTCTCCAGATGTTGTGACTTATACTTCTTTG ATTAATAGCATGTGCAAGACTGGGAATTTGCACCGTGCAATGGAATTCTTTGATCAACTG CATGCTAGGGGATTATATCCCAACGATAGAACTTACACAACATTGATTGTTGGTTTTTCT CAGCAGGGTCTTATGAATGAGGCTTATAAGCTGTTGAATGAAATGATTTCAAATGGCTTT TCCCCTTCAATTGTAACTTACAATGCGTTAATTAATGGGCATTGTGCAGTGGGCAGGATG GAAGATGCTTTACGTGTGACTCAAGAGATGGAACAGAGAAGGCTGGTCCCAGATGTTGTA ACTTATAGTACAATAATATCTGGGTTCTGTAGAAACTGTGGGTTGGAAAGAGCATTCTGT GTTAAGCAGCAGATGGTTGAAAAAGGGGTTTTACCTGATGTTATTACTTATTCATCCCTA ATTCAAGGTCTTTGTGAGCAGCGAAGACTGACTGAAGCTTTCGAACTTTTCCAAGAGATG TTCAGAGTAGGTCTGCAACCAGATAAGTTTACATATACTACACTTATTGGTGCATACTGT GCAAATGGGGATATTAAAGGTGCTTTTCACCTGCATAACAAAATGATCTATAAGGGTTGC TTTCCTGATGTCGTCACTTACAATGTCCTAATCAATGGGCTTAACAAACAAGCTCGCACT AGGGAAGCAAAGCGGCTTCTGTTCAAGTTGTTGTATGAGCAATCAGTGCCAAATTGTGTC ACTTATGACATGCTAATAGAAAGTTGCAAGGATCTTGAATTGAAGAGTGCGTTAGATCTT ATTAAAGGATTCTGCATGAAAGGTCTGTTGAATGAAGCTGACCAAGTTTTTGAGTTGATG CTGCAAAAACACAAGAAGCCGAGTGAAGTAGCTTATAGCCTACTTATACACGGTCATTCC AGGGGTGGGAATTTGCATAGAGCCTTGAATCTTTTCAGAGAAATGGCTAATCTTGGATTT ATTCCTCATACAGTAAGTATTATTGTGCTCATGAAAGAACTTTTTAAAGAAGGGATGAGC GAGGAATTACATCAAGTAATTCAAAGCACATTGGAAACCTGTAAACTTGCCGATGGTGAG CTAGCAAAAGTTATTGTTGAGGTGAACTACAAGGAAGGGAACATGGATGCGGTTTCTCAT GACATTGTGAATGTGGAAGGTCATATTTTGAACTCCGATGAGCGACATTCTCTCGAGAGG GTTAAATTCCCACTTTGCTTGAAAATTGTAGGCTTCTCACAGGAAGCGACAGGGTGTCTT CATATTTCCCCACAAAAGACTGTTTGCAAGTTCATCCAGAAGTTACATTTGATTGATTTG CTTCCTATGGAGCATCTGTTCCATGTGCATCATAGCTTGTTTCTAAGTGTTGTTATTCAG TTCAGTGTTTCCTCTAGATTGGGCATGAAGGAAATTTCTCTGTTTTTCATGAATAATCGC TTTGTGCAGAAGGGTTGTAAGAAAATGACAAGATATGAAGTAAGTAAACCATCAAATGGT AATACACACCAGAGAATGGTGGGTGGTCCGCCAGTGGAAACCATTCTTTGGAGAAATGGG TCACCTGAAAAACCAGTGCTCTGCAATGCATGTGGATCAAGATGGCGGGGTAGAAGGACA CTAGATGGCTATATTCCCAGACATGGAAACATAGAAATAGAGAACTATCTGCTCCCTTAT GACATGAAGCCGGCCCGTGAAGGAAAAAAGTTAGAAGTTGGAATAGAGGTTTCTGGACAG GATGGCTCTTCAGCTTGTCTTGAAGAGGAAATGAATAACATATCAAGCTTATGTTTAGCA GGATCATCCTCAGAAAACTGCATGCAGATGGAAGAAACAAATGAAGCATACAAAGGTTCT CTATGGAATCCTGACAGTGTCCCAAGAAGAAAAAGATCAGAGCGTAGAAAATGCATTTTG TCACCTATTGAAAGATTCCAGAGGCAACTTCATAACATTCTACAGGAGCCAGACTTTGAA AATATCTCTGCAGACGATGAAAATATTCTAGTATATGCAAGGAACAAACACTTTCCTCCT AATGAGATTGGTCTTGGAGCTATGCTTCCACCTACTGCTACAAAACACTTGACAACTCTA TCTCCATTGGCAGAAGATAATGATGCCTCTTGCTCAGTGAATGTTCCTGTAGGAAATTCC AATTCCAATTTGTAAGTGAATTTTGAGCTGCATGCACAAGGTTCAAGCTGGAGAAGCAGA CAAAATCCTCTCTAATCTTGAGTGTCCCAAGAAGAATGATCAGAGAGTAGAAAGCACGTT TTCACCTGTTGAAAGACTCCAGGGGGCAGGGGCAACTTCATACTAATCTACAGGAACCAG GCTTGAAAATCTCTCTGCCGATGACGAAAATATTCTAATTTATGCAAGGAACAAATATAT TCCTCCTAGTGAGATTGTTCTTGGAGCTATGCTGCTCGTATCACCACCTACTAATACAGA TTACTTGCTGTCTCTATCTCCAATGGCAGATGCTGGAAGTGAGTTTTGAGAAGCATGCAT AAGGTTCAAGCTGGAACATTCATCGAGGGAGAGGCATTTTTTTCACAGATGTACAACTGA TAGTCTTGAGCATTATCTAATGCAAGTGATCGTACCTACTTGTTCTGATGGAGCATCAAA TACTTATTGCAGAAAGTTAAATTTGTTCAAGGTTAGGGAACTCTTCCGGGGATTCTTTCT TTGTTTTTATATTGAGGTAACTTAAGTGATGATTTTGGAAAATTTATGTTGGGCAGTTCT AATGGAAAGATTTTATAGTCGCATGTTAAAGGCTTGGAACATTAACTATGTGCGTACGGG GATTTTCATTTGCTTCATGCATGATGAAGACAACGATACTTGAAGTCTTGGTCATAATGT AAAATGGGTATCCTTCGAATTTTTGTGGTCATTGATCATGAAGTTTCTTATATAAACTGG TGAGTATTGCTTCTGGAGTATGTACCTCATGTTGGTGCTTAGTGTCAAGCTTGTGAAGCT GAGCTTTTTAGTACAAGCTAGATCAGACATTTCAGTTGCATTTCACAGTGGTGGGGCAAG GCTGTACCTGATTGCTTCATAGAGTGCAAAATAGGAAGCTCTGAAGCTACTTGGATGAGG CATATGTCCTTGAAGACTAAAGCAGCTCAGGAGCACCTGTTCTTTGGAAAATCTAGTTGG GGCCAATTATTGGCTTTAACGAAGCTCTATTTTATTACTAGGCATCTACTTCCAGGGCTA CTCAACTGACAAAGTTGGTCGTTAAACTCATATGTTTTATATTGAACCGATAGATTTCCT TGTACAAAGACCTTCTTCCAAGGAAAAAGAAAAGCTGAATAAATGTTGTTTTGGTTATAT TATGTTTTTTTACCGGGAGATGCTATTATATAAGATGTGAGATCTTTGTC