Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g108180.3.1
CDS Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A0B2RYJ5_GLYSO)
Sequence	ATGGCGATTCGCAGAACTCGAGTCTCCATTTTCACTTCTTCGCACAAGGTATGTTTGTTA TACTCTTCTTCACGCTCTATTTCCGATATCAAGCTCCCGAAAACCCTAACCTTAAGCTCC CCGCTTTCTTCCTTACATTTGAAAACCCTAGCAACATTTGCAGCACCAAATGATGCTCAA ATTCCTCCACATCCTTCTGAGGTTCCGCAAAATAAGGATTTTGGAAGCTCTGCTCAACAG TGGAATAACCAAACCCAGAATTATCCTAATAATAATCAGATGAATATGTCGTATCCTCAG TATCAAACTACTAATCAGGTGAATCAAGGTTATCCAAATTATGGAAATGTTAATCCTGTT CAGGGATATTCCCAGAGCTTTCAGAATCAGAAAAGCCCTAATGTTCAAAATCAGAGCATT CCGTATAGGCCGAGCTCTGGTGAGCCTCGAAACTACCCACCACCTGGGAATGTTAACCAA TGGAATTATCAAAATCAAGGCTTCAGACAACATGGAACCCCGAATGCGGCTCCAAGTTAT CCACAAGGTGGATATCAGAATCCAGAACATGCACAAAATCCCAATAGAAATCAGAATTAT CCACAGCCTGGTGCTGGTAATCAGTGGAATAATCAGAATCAAAATTATGCTCCACGAGTA AGCCCCAGTCAACTGGATTCTCAGGCACAGAGGGTGCCACCAGGAAGTGGGTTTCCAATG AATAATCAATCTAATAACCAAGCCCAGTTTGAGCAAAATCAAGTCCCGAGTGGTCCTCCA TCTACTGTTGATTTAATAAGCTTGTGCCAAGAGGGTAAAGTTAAGGAGGTTATTGAACAT ATGGAACAGGGGATAGTTGCGGATGCACAATGTTTTGACATGCTCTTTGAGTTGTGTGCC AATTCAAAGAAACTTGAAGATGCTAAAAAGGTGCATGATTACTTCTTGAGATCAAAATGC AGGAGTGATCTTGGTTTGAGCAATAAAGTTATCAATATGTATTCCAAGTGTGGGAGTATG ACAGATGCACGCAGAGTTTTTGATCATATGCGTGATAGGAATTTAGACTCATGGCATTTG ATGATAAATGGATATGCATTGAATGGGTTGGGGGATGATGGGTTGACTTTGTATGATCAG ATGCGGGAGTCGGGAATGAAACCAAACGAGGAAACTTTCCTGTATGTTTTCGAGGCTTGT GCCAGTGTAGATGCTATTGATGAGGCTTTCATGCATTTTGAGTCAATGATGGCTGAGTAT GGAATTTCTCCACAGGTGGAGCACTATTTAGGACTTCTGGGTGTTCTAGGAAAATGTGGA CATCTTGCTGAGGCAGAGGAATATATCTCAAAGCTTCCATTTGAACCAACAGAAGCCGTC TGGGAAGCATTAATGAATTATGCTCGTATACATGGCGATATTGATCTTGAGGATCGAGCT GAGGAGTTGATGGTAGGACTTGACCCTTCTAAGGCTGTTGCTAATAAGATTCCCACTCCA CCAGTAAAGAAGCAGTTAGCCATTAATATGCTTGAGGGAAGAAATAGAGTTGCTGAATTT CGCAACCCAACCCTCTTCAAGGATGACGAGAAGTTGAGGGCTGCGATGAAAGAACAAGCT TACGTTCCTGATACCAGATATGTCCTTCATGATATCGATCAGGAAGCCAAGGAACAGGCT TTGCTATACCATAGCGAACGTTTAGCCATTGCATATGGTCTGATTAGTACTCCTGCCAGA ACACCTTTACGTATCATAAAGAATCTCCGTGTATGTGGTGATTGTCACAATGCCATCAAG ATCATGTCAAGGATTGTTGGGCGAGAGTTAATTGTCAGGGACAACAAGCGGTTTCATCAT TTCAAGGATGGAAAATGCTCTTGTGGAGATTATTGGTGA

Peptide Sequence

PEP ID	Solyc01g108180.3.1
PEP Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A0B2RYJ5_GLYSO)
Sequence	MAIRRTRVSIFTSSHKVCLLYSSSRSISDIKLPKTLTLSSPLSSLHLKTLATFAAPNDAQ IPPHPSEVPQNKDFGSSAQQWNNQTQNYPNNNQMNMSYPQYQTTNQVNQGYPNYGNVNPV QGYSQSFQNQKSPNVQNQSIPYRPSSGEPRNYPPPGNVNQWNYQNQGFRQHGTPNAAPSY PQGGYQNPEHAQNPNRNQNYPQPGAGNQWNNQNQNYAPRVSPSQLDSQAQRVPPGSGFPM NNQSNNQAQFEQNQVPSGPPSTVDLISLCQEGKVKEVIEHMEQGIVADAQCFDMLFELCA NSKKLEDAKKVHDYFLRSKCRSDLGLSNKVINMYSKCGSMTDARRVFDHMRDRNLDSWHL MINGYALNGLGDDGLTLYDQMRESGMKPNEETFLYVFEACASVDAIDEAFMHFESMMAEY GISPQVEHYLGLLGVLGKCGHLAEAEEYISKLPFEPTEAVWEALMNYARIHGDIDLEDRA EELMVGLDPSKAVANKIPTPPVKKQLAINMLEGRNRVAEFRNPTLFKDDEKLRAAMKEQA YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIK IMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW*

Transcript Sequence

Transcript ID	Solyc01g108180.3.1
Transcript Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A0B2RYJ5_GLYSO)
Sequence	ATGGCGATTCGCAGAACTCGAGTCTCCATTTTCACTTCTTCGCACAAGGTATGTTTGTTA TACTCTTCTTCACGCTCTATTTCCGATATCAAGCTCCCGAAAACCCTAACCTTAAGCTCC CCGCTTTCTTCCTTACATTTGAAAACCCTAGCAACATTTGCAGCACCAAATGATGCTCAA ATTCCTCCACATCCTTCTGAGGTTCCGCAAAATAAGGATTTTGGAAGCTCTGCTCAACAG TGGAATAACCAAACCCAGAATTATCCTAATAATAATCAGATGAATATGTCGTATCCTCAG TATCAAACTACTAATCAGGTGAATCAAGGTTATCCAAATTATGGAAATGTTAATCCTGTT CAGGGATATTCCCAGAGCTTTCAGAATCAGAAAAGCCCTAATGTTCAAAATCAGAGCATT CCGTATAGGCCGAGCTCTGGTGAGCCTCGAAACTACCCACCACCTGGGAATGTTAACCAA TGGAATTATCAAAATCAAGGCTTCAGACAACATGGAACCCCGAATGCGGCTCCAAGTTAT CCACAAGGTGGATATCAGAATCCAGAACATGCACAAAATCCCAATAGAAATCAGAATTAT CCACAGCCTGGTGCTGGTAATCAGTGGAATAATCAGAATCAAAATTATGCTCCACGAGTA AGCCCCAGTCAACTGGATTCTCAGGCACAGAGGGTGCCACCAGGAAGTGGGTTTCCAATG AATAATCAATCTAATAACCAAGCCCAGTTTGAGCAAAATCAAGTCCCGAGTGGTCCTCCA TCTACTGTTGATTTAATAAGCTTGTGCCAAGAGGGTAAAGTTAAGGAGGTTATTGAACAT ATGGAACAGGGGATAGTTGCGGATGCACAATGTTTTGACATGCTCTTTGAGTTGTGTGCC AATTCAAAGAAACTTGAAGATGCTAAAAAGGTGCATGATTACTTCTTGAGATCAAAATGC AGGAGTGATCTTGGTTTGAGCAATAAAGTTATCAATATGTATTCCAAGTGTGGGAGTATG ACAGATGCACGCAGAGTTTTTGATCATATGCGTGATAGGAATTTAGACTCATGGCATTTG ATGATAAATGGATATGCATTGAATGGGTTGGGGGATGATGGGTTGACTTTGTATGATCAG ATGCGGGAGTCGGGAATGAAACCAAACGAGGAAACTTTCCTGTATGTTTTCGAGGCTTGT GCCAGTGTAGATGCTATTGATGAGGCTTTCATGCATTTTGAGTCAATGATGGCTGAGTAT GGAATTTCTCCACAGGTGGAGCACTATTTAGGACTTCTGGGTGTTCTAGGAAAATGTGGA CATCTTGCTGAGGCAGAGGAATATATCTCAAAGCTTCCATTTGAACCAACAGAAGCCGTC TGGGAAGCATTAATGAATTATGCTCGTATACATGGCGATATTGATCTTGAGGATCGAGCT GAGGAGTTGATGGTAGGACTTGACCCTTCTAAGGCTGTTGCTAATAAGATTCCCACTCCA CCAGTAAAGAAGCAGTTAGCCATTAATATGCTTGAGGGAAGAAATAGAGTTGCTGAATTT CGCAACCCAACCCTCTTCAAGGATGACGAGAAGTTGAGGGCTGCGATGAAAGAACAAGCT TACGTTCCTGATACCAGATATGTCCTTCATGATATCGATCAGGAAGCCAAGGAACAGGCT TTGCTATACCATAGCGAACGTTTAGCCATTGCATATGGTCTGATTAGTACTCCTGCCAGA ACACCTTTACGTATCATAAAGAATCTCCGTGTATGTGGTGATTGTCACAATGCCATCAAG ATCATGTCAAGGATTGTTGGGCGAGAGTTAATTGTCAGGGACAACAAGCGGTTTCATCAT TTCAAGGATGGAAAATGCTCTTGTGGAGATTATTGGTGA