Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g108170.3.1
CDS Infomation

BEST plant protein match is: (TAIR:plant.1) protein, putative (AHRD V3.3 *** G7JLA4_MEDTR)
Sequence

ATGGCCTGCCTAAATCAACAAGGACTTTGCACAACAATGGGTCCAAGAATTTCATTCTCT
AATGATTTTGCTGATAATCAGCAAACATTAAGGCATGAACAATATGGCTACAAAGAGGCA
CCTGTTTCCTCCGATTTCGAGTTTTCGGTCTCTGGTTACAAGATGATTCCAGCTGATGAG
GTTTTCTTCAAGGGTAAATTGTTGCCCTTGAGAGAAAATAGCAATAAGGCAACAACACTT
AAAGATGAACTTCTTTCTAACGATGATGATGATTATGATGATATATTTCCATCAGTAGGA
AAGGGGAGCTGGAAAGAACGTTTTGGTTTTAAAAGAGCTCCAAGTTTGCCAAAGAAAGTT
GATAATAAAGAGACAAAGATGCCTGATTTCTTCAATGACATTATCACAGGAGCTAATTGA

Peptide Sequence

PEP ID

Solyc01g108170.3.1
PEP Infomation

BEST plant protein match is: (TAIR:plant.1) protein, putative (AHRD V3.3 *** G7JLA4_MEDTR)
Sequence

MACLNQQGLCTTMGPRISFSNDFADNQQTLRHEQYGYKEAPVSSDFEFSVSGYKMIPADE
VFFKGKLLPLRENSNKATTLKDELLSNDDDDYDDIFPSVGKGSWKERFGFKRAPSLPKKV
DNKETKMPDFFNDIITGAN*

Transcript Sequence

Transcript ID

Solyc01g108170.3.1
Transcript Infomation

BEST plant protein match is: (TAIR:plant.1) protein, putative (AHRD V3.3 *** G7JLA4_MEDTR)
Sequence

TAGCGCGGATTAATAGACATAGACAAATTTTATATATGTGAAATGCGGTCATTGTCTTTT
CAAGATATTTGGTAGTCAAAAGTTGATTACATAATAGACAAGTTTACCATCTATATAAAG
ACTAGAAAAACTACATGTGACTTCTCACCTTGAAAATTATTAGTCAAAAGATCAGTATAA
TTTTCCTTTGAATGGTCCATGGCCTGCCTAAATCAACAAGGACTTTGCACAACAATGGGT
CCAAGAATTTCATTCTCTAATGATTTTGCTGATAATCAGCAAACATTAAGGCATGAACAA
TATGGCTACAAAGAGGCACCTGTTTCCTCCGATTTCGAGTTTTCGGTCTCTGGTTACAAG
ATGATTCCAGCTGATGAGGTTTTCTTCAAGGGTAAATTGTTGCCCTTGAGAGAAAATAGC
AATAAGGCAACAACACTTAAAGATGAACTTCTTTCTAACGATGATGATGATTATGATGAT
ATATTTCCATCAGTAGGAAAGGGGAGCTGGAAAGAACGTTTTGGTTTTAAAAGAGCTCCA
AGTTTGCCAAAGAAAGTTGATAATAAAGAGACAAAGATGCCTGATTTCTTCAATGACATT
ATCACAGGAGCTAATTGATGGATTGAAGAGGGAGGATAAGCAATGGTAATGTTGTAGAGT
TCTTGGATCTAACAAGGGTGGACGTTCTTTTTTTTTTCTTTTTCCTATCTTGTTTTGGGG
TGTTTTTAGAGATTTTGAGATTTTTCTTGACTATTAGGAGACTGAAAACTTGTAATCTCT
TGGATCATTCAGCCTCCACCCCTTAGAAAAATGGACCATGTTGTACAAATGTTTTTCGAC
TTTTAAGTACTTTTGATGTAATCATATGTATTTGTTTGATAGATTCTAATCT