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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g107980.3.1
CDS Infomation

U-box domain-containing family protein (AHRD V3.3 *** B9HS21_POPTR)
Sequence

ATGCCTGCAAGTTTAGACCCTTTGGATGTTGGTGTTCAGATTCCATACCATTTTCGGTGT
CCAATCTCCTTAGAGCTTATGCGAGATCCGGTCACAGTCTGTACCGGTCAAACTTACGAC
CGCCAAAGCATTGAGTCCTGGGTCGCCACCGGCAATACTACTTGTCCGGTAACAAGGGCG
CCGCTCAGTGATTTCACTCTTATTCCAAATCATACTCTTCGCCGCCTTATACAGGAGTGG
TGTGTTGCGAACCGGGCTTTCGGAGTTGAGAGGATTCCGACGCCGAAACAACCGGCTGAT
CCATCGTTGGTTCGGTCATTGCTGAATCAGGCGGCGGCTCAGTCGAATCATATGAATTCC
AGGGTTGCGGCGTTGAGGAGACTCAGAGGACTAGCTCGTGACTCGGAGAAGAACAGGTCT
GTTATTTCGGCGAACAACGCACGGGAAATTCTTCTAGCGATTGTATTCTCCCGTATGGAT
TCGGACGCATCAGAGTTGCATCACGAATCTCTCGCGATTTTATCTATGTTTCCGCTCTCT
GAACCGGAATGCGTTTTTGTCGCTTCCGATCCGGGACGAGTTGGTTACCTGGTTGCTATG
CTTTTTCATCCTTCCATCGATGTCCGAGTCAACTCAGCTGCTTTGATTGAGACTGTAGTC
GCCGGAATGAGATCCCCGGAGTTCCGTGCTCAAATCAGCAATGCGGATGACGTCTTCGAA
GGAGTCGTCGGAATTTTGAATTATCCATTGGCGTATCCGAGAGCGTTGAAAGTCGGAATC
AAGGCATTATTTGCTTTATGCCTAGTGAAACAACACCGTCAAAGAGCGGTGAGCGCCGGA
GCGGTGGAAGCGCTAATCGACAGGCTACAGGATTTTGAGAAATGCGATGCGGAAAGAGCA
CTCGCCACCATCGAACTCCTCTCCAGAATTCCATCAGGATGCGCAGCGTTAGCATCTCAC
GCGCTAACGGTGCCTCTGCTGGTTAAAATCATTCTCAAGATATCGGAGCGTGCGACGGAA
TACGCCGCCGGAGCTCTGCTATCGCTTTGCTCAGCGTCGGAACAAGCTCAGAAAGAGGCG
GTCGCCGCCGGCGTGTTGATTCAGCTTCTGCTGTTAGTTCAAAGCGATTGTACAGAACGT
GCGAAGCGAAAAGCACAAATGCTTTTGAAGCAGCTTCGCGATTGTTGGCCGGAGGACTCC
ATCGCCAATACAGATGATTTTGCCTGCAGCGACGTCGTTCCGTTTTAA

Peptide Sequence

PEP ID

Solyc01g107980.3.1
PEP Infomation

U-box domain-containing family protein (AHRD V3.3 *** B9HS21_POPTR)
Sequence

MPASLDPLDVGVQIPYHFRCPISLELMRDPVTVCTGQTYDRQSIESWVATGNTTCPVTRA
PLSDFTLIPNHTLRRLIQEWCVANRAFGVERIPTPKQPADPSLVRSLLNQAAAQSNHMNS
RVAALRRLRGLARDSEKNRSVISANNAREILLAIVFSRMDSDASELHHESLAILSMFPLS
EPECVFVASDPGRVGYLVAMLFHPSIDVRVNSAALIETVVAGMRSPEFRAQISNADDVFE
GVVGILNYPLAYPRALKVGIKALFALCLVKQHRQRAVSAGAVEALIDRLQDFEKCDAERA
LATIELLSRIPSGCAALASHALTVPLLVKIILKISERATEYAAGALLSLCSASEQAQKEA
VAAGVLIQLLLLVQSDCTERAKRKAQMLLKQLRDCWPEDSIANTDDFACSDVVPF*

Transcript Sequence

Transcript ID

Solyc01g107980.3.1
Transcript Infomation

U-box domain-containing family protein (AHRD V3.3 *** B9HS21_POPTR)
Sequence

ATGCCTGCAAGTTTAGACCCTTTGGATGTTGGTGTTCAGATTCCATACCATTTTCGGTGT
CCAATCTCCTTAGAGCTTATGCGAGATCCGGTCACAGTCTGTACCGGTCAAACTTACGAC
CGCCAAAGCATTGAGTCCTGGGTCGCCACCGGCAATACTACTTGTCCGGTAACAAGGGCG
CCGCTCAGTGATTTCACTCTTATTCCAAATCATACTCTTCGCCGCCTTATACAGGAGTGG
TGTGTTGCGAACCGGGCTTTCGGAGTTGAGAGGATTCCGACGCCGAAACAACCGGCTGAT
CCATCGTTGGTTCGGTCATTGCTGAATCAGGCGGCGGCTCAGTCGAATCATATGAATTCC
AGGGTTGCGGCGTTGAGGAGACTCAGAGGACTAGCTCGTGACTCGGAGAAGAACAGGTCT
GTTATTTCGGCGAACAACGCACGGGAAATTCTTCTAGCGATTGTATTCTCCCGTATGGAT
TCGGACGCATCAGAGTTGCATCACGAATCTCTCGCGATTTTATCTATGTTTCCGCTCTCT
GAACCGGAATGCGTTTTTGTCGCTTCCGATCCGGGACGAGTTGGTTACCTGGTTGCTATG
CTTTTTCATCCTTCCATCGATGTCCGAGTCAACTCAGCTGCTTTGATTGAGACTGTAGTC
GCCGGAATGAGATCCCCGGAGTTCCGTGCTCAAATCAGCAATGCGGATGACGTCTTCGAA
GGAGTCGTCGGAATTTTGAATTATCCATTGGCGTATCCGAGAGCGTTGAAAGTCGGAATC
AAGGCATTATTTGCTTTATGCCTAGTGAAACAACACCGTCAAAGAGCGGTGAGCGCCGGA
GCGGTGGAAGCGCTAATCGACAGGCTACAGGATTTTGAGAAATGCGATGCGGAAAGAGCA
CTCGCCACCATCGAACTCCTCTCCAGAATTCCATCAGGATGCGCAGCGTTAGCATCTCAC
GCGCTAACGGTGCCTCTGCTGGTTAAAATCATTCTCAAGATATCGGAGCGTGCGACGGAA
TACGCCGCCGGAGCTCTGCTATCGCTTTGCTCAGCGTCGGAACAAGCTCAGAAAGAGGCG
GTCGCCGCCGGCGTGTTGATTCAGCTTCTGCTGTTAGTTCAAAGCGATTGTACAGAACGT
GCGAAGCGAAAAGCACAAATGCTTTTGAAGCAGCTTCGCGATTGTTGGCCGGAGGACTCC
ATCGCCAATACAGATGATTTTGCCTGCAGCGACGTCGTTCCGTTTTAA