Plant GARDEN
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g107940.3.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT2G15530.7)
Sequence

ATGCAAGGGAACAGAAGCATACTAGATTCAATTCCAGAAACTACCGATCTTAATCAGGGA
TCTGTTTCAAGTAATGCTTCTGGAGATCCGACAGCCCTGTGGAATAACTTTCTAAATCCA
GTGGAGGATCGATTATCGAATTCCATGCTTTCTCCTGCTAGAGAAAATCGTAGACGTGCT
AATGGTATTAGTTATACAACACAGAACTGCAGTGCACGGGATAGAGGTGAGTCGAGCTCC
AGTGCCAATTTTCATGAGATTGGACATAGTAGTCATTTGAAAATAGGACATGATTGGCCT
TCTTCATCAAGTAATCATGTCCTGACTAATCCAAAGTCAGAAGAAAGGCGATTTGGACCA
TCCACTGTCCTCTATCCTGAGAGTTCAACAAGTGGATATGCTGGAAGTCATCTGATTGGC
AGCCATCCAGTTTTACCAAATCTTGCCTTGGCCCAGAGTCCTGCAAATGGCAACTTAAGT
GGCATATACAATAATGGTGACACTCGGCTCGTTATGAGACCAAGTGTATCTTCAACTGTC
TACACTTCTAGCAGCAGATGGGAAGCGGAGCGTCCTGTTTCTGGTGTCTCTTACAATGCT
GGTACTTCTTCAGGTAGTTCTAGTTATTGGACCAGGTCCCCTGATATATCAGGTTCTTCC
ATGGGTACTCGGGGTATATCCTGCAAGCGCAAGGTCCTTGAAGGCAGTTCTGGGCAGTCT
TGTGGTAGAAGTTCAAGCTCCAATACACAACCTGTGAACATTATAGCACACAATTTTCCA
AGTCATTATGATGCTTCCAGCAACTTAAACATATCACCAGCCTCAGCAAGTGTGCAGAAT
ACTTATCACTTGGAAAACCTTTATCCAAGAAATATGGTTGGAACAAGAGGGGGTGCTAGT
GGAGTTGCAGAAACCTCCGCCAGAAATTCTGGTAGTGGACGGAATCTTGGGACAGATTTA
GGGCATTCTAGTGTTGGCTCTACTCTTGTAATGCCTCGACCTATTTCAGAATCTAATTAT
TTGGGCCCCAGACAACCAATTTCACAGCCAATGAATGCAGGTAACTCAGGAAGCCATTCT
GGCATAATACACATTTCTGGTGTTCCAAGTGGTTTGCATCCAGTTCCTTGGAATATATCT
TCTAATTCACGAGGTGGTAGTTCATCAAGTTCAAATGTGGTTTCTGCTGATAGATATGCT
GCATTACAAGATGATGCTAACATCGGGAGCTCATTAAGAAATAATGGGGAACCTCTTCCA
TTTGTTCCTGTTCCTGGGACTGGAAATATTGTACAGAATACCACTAATTGGAGTTTAGCC
ACTTCAAATGGAAGCTATTCCAGAAATACGCCTTCTAGTTCTGCACTCAGCAGTGGGCCA
AGTATGCAAACTTTTCCTACTGCATGGACACCTTATCAAAACTTAGCAAGCAGTAGTACT
CGTAGTTCTTCTGAAATTTCTCCTTGGACTCTGCTCCCAACTGTTGAGTCCGAGTCTGGA
AGTCAGACAGGTCATTTTCCGCTGCTATCTTCAGCTGCTTCTCCTGTGGAGGCGGCAGAG
ATATCATTGCAATCTAGTAGCCGTCGTAATCATCGAAACCACCTTATATCATCTTTGATG
GCCGATTTCCCAAGTAATGATGTGGATGGATGGCATGGTTTTGTTTCTGATATCGAGGGC
CGCCACAGAATGGTACAGGAGAATCGTCAAGTCCTGCACGCCATGCAGAGGGGCGAGAAC
AGGCGATCCGAGGATTATATGATGCTTGATCCATATGTCAACGGCGTCGCGGAGTTGCAT
GATAGACATAGAGGCATGAGGCTCGACGTTGATAACATGTCGTACGAGGAATTATTGGCA
TTGGAAGAACGTATAGGAAATGTGAACACCGGATTGAGTGAAGAAACCATTTTGGGACGT
ATGAAAGAGCGAAAGCATGAGCCAGTCTATGGAGGGTCATCGTCAAATACGGAGCCTTGC
TGTATATGTCGGGAGGAATACACAAGTGGAGATTACATGGGCATATTGGATTGTGGACAT
GAATTCCATAGTAGTTGCATAAAGCAGTGGCTAAGGCTGAAGAATGTGTGTCCTATTTGT
AAGAATACAGCCTTAAAAAAATGA

Peptide Sequence

PEP ID

Solyc01g107940.3.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT2G15530.7)
Sequence

MQGNRSILDSIPETTDLNQGSVSSNASGDPTALWNNFLNPVEDRLSNSMLSPARENRRRA
NGISYTTQNCSARDRGESSSSANFHEIGHSSHLKIGHDWPSSSSNHVLTNPKSEERRFGP
STVLYPESSTSGYAGSHLIGSHPVLPNLALAQSPANGNLSGIYNNGDTRLVMRPSVSSTV
YTSSSRWEAERPVSGVSYNAGTSSGSSSYWTRSPDISGSSMGTRGISCKRKVLEGSSGQS
CGRSSSSNTQPVNIIAHNFPSHYDASSNLNISPASASVQNTYHLENLYPRNMVGTRGGAS
GVAETSARNSGSGRNLGTDLGHSSVGSTLVMPRPISESNYLGPRQPISQPMNAGNSGSHS
GIIHISGVPSGLHPVPWNISSNSRGGSSSSSNVVSADRYAALQDDANIGSSLRNNGEPLP
FVPVPGTGNIVQNTTNWSLATSNGSYSRNTPSSSALSSGPSMQTFPTAWTPYQNLASSST
RSSSEISPWTLLPTVESESGSQTGHFPLLSSAASPVEAAEISLQSSSRRNHRNHLISSLM
ADFPSNDVDGWHGFVSDIEGRHRMVQENRQVLHAMQRGENRRSEDYMMLDPYVNGVAELH
DRHRGMRLDVDNMSYEELLALEERIGNVNTGLSEETILGRMKERKHEPVYGGSSSNTEPC
CICREEYTSGDYMGILDCGHEFHSSCIKQWLRLKNVCPICKNTALKK*

Transcript Sequence

Transcript ID

Solyc01g107940.3.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT2G15530.7)
Sequence

GTGCCGGGCTAACCAGAAGGGGTGGGCTAGTGAAACTAATTAAATGGAGTAGTAGAAGTT
AATTCTTCATTCATAGTAGAAGAAACTCAATTTCCCTGCACCAACAACGAAACCCTCATC
TTCAATGGAGATTTAGTGTTTTTCTAATACAGAATAAGCAAAGCCCACAACCCCCAAAAC
ATATAAATGACAGAAAATTCATCTGATTCTCAGGTCCTCAAGAAATTTTTAGGTAGAATC
ATTGTCACAGCTCCATGCTTACCAATCAAGCTGCAGAACCAAGCAATTAATGGTTGTAAG
TATTATGTTTGAGAAAATTCCAACTGTCTGAAGCAACTTTTGACAGCCTAATATTTTGGT
GGAGTATCAAAAGTGCATTCAAGGCTTTGATTTGCCATAATTGGCCAAGATGCAAGGGAA
CAGAAGCATACTAGATTCAATTCCAGAAACTACCGATCTTAATCAGGGATCTGTTTCAAG
TAATGCTTCTGGAGATCCGACAGCCCTGTGGAATAACTTTCTAAATCCAGTGGAGGATCG
ATTATCGAATTCCATGCTTTCTCCTGCTAGAGAAAATCGTAGACGTGCTAATGGTATTAG
TTATACAACACAGAACTGCAGTGCACGGGATAGAGGTGAGTCGAGCTCCAGTGCCAATTT
TCATGAGATTGGACATAGTAGTCATTTGAAAATAGGACATGATTGGCCTTCTTCATCAAG
TAATCATGTCCTGACTAATCCAAAGTCAGAAGAAAGGCGATTTGGACCATCCACTGTCCT
CTATCCTGAGAGTTCAACAAGTGGATATGCTGGAAGTCATCTGATTGGCAGCCATCCAGT
TTTACCAAATCTTGCCTTGGCCCAGAGTCCTGCAAATGGCAACTTAAGTGGCATATACAA
TAATGGTGACACTCGGCTCGTTATGAGACCAAGTGTATCTTCAACTGTCTACACTTCTAG
CAGCAGATGGGAAGCGGAGCGTCCTGTTTCTGGTGTCTCTTACAATGCTGGTACTTCTTC
AGGTAGTTCTAGTTATTGGACCAGGTCCCCTGATATATCAGGTTCTTCCATGGGTACTCG
GGGTATATCCTGCAAGCGCAAGGTCCTTGAAGGCAGTTCTGGGCAGTCTTGTGGTAGAAG
TTCAAGCTCCAATACACAACCTGTGAACATTATAGCACACAATTTTCCAAGTCATTATGA
TGCTTCCAGCAACTTAAACATATCACCAGCCTCAGCAAGTGTGCAGAATACTTATCACTT
GGAAAACCTTTATCCAAGAAATATGGTTGGAACAAGAGGGGGTGCTAGTGGAGTTGCAGA
AACCTCCGCCAGAAATTCTGGTAGTGGACGGAATCTTGGGACAGATTTAGGGCATTCTAG
TGTTGGCTCTACTCTTGTAATGCCTCGACCTATTTCAGAATCTAATTATTTGGGCCCCAG
ACAACCAATTTCACAGCCAATGAATGCAGGTAACTCAGGAAGCCATTCTGGCATAATACA
CATTTCTGGTGTTCCAAGTGGTTTGCATCCAGTTCCTTGGAATATATCTTCTAATTCACG
AGGTGGTAGTTCATCAAGTTCAAATGTGGTTTCTGCTGATAGATATGCTGCATTACAAGA
TGATGCTAACATCGGGAGCTCATTAAGAAATAATGGGGAACCTCTTCCATTTGTTCCTGT
TCCTGGGACTGGAAATATTGTACAGAATACCACTAATTGGAGTTTAGCCACTTCAAATGG
AAGCTATTCCAGAAATACGCCTTCTAGTTCTGCACTCAGCAGTGGGCCAAGTATGCAAAC
TTTTCCTACTGCATGGACACCTTATCAAAACTTAGCAAGCAGTAGTACTCGTAGTTCTTC
TGAAATTTCTCCTTGGACTCTGCTCCCAACTGTTGAGTCCGAGTCTGGAAGTCAGACAGG
TCATTTTCCGCTGCTATCTTCAGCTGCTTCTCCTGTGGAGGCGGCAGAGATATCATTGCA
ATCTAGTAGCCGTCGTAATCATCGAAACCACCTTATATCATCTTTGATGGCCGATTTCCC
AAGTAATGATGTGGATGGATGGCATGGTTTTGTTTCTGATATCGAGGGCCGCCACAGAAT
GGTACAGGAGAATCGTCAAGTCCTGCACGCCATGCAGAGGGGCGAGAACAGGCGATCCGA
GGATTATATGATGCTTGATCCATATGTCAACGGCGTCGCGGAGTTGCATGATAGACATAG
AGGCATGAGGCTCGACGTTGATAACATGTCGTACGAGGAATTATTGGCATTGGAAGAACG
TATAGGAAATGTGAACACCGGATTGAGTGAAGAAACCATTTTGGGACGTATGAAAGAGCG
AAAGCATGAGCCAGTCTATGGAGGGTCATCGTCAAATACGGAGCCTTGCTGTATATGTCG
GGAGGAATACACAAGTGGAGATTACATGGGCATATTGGATTGTGGACATGAATTCCATAG
TAGTTGCATAAAGCAGTGGCTAAGGCTGAAGAATGTGTGTCCTATTTGTAAGAATACAGC
CTTAAAAAAATGAACAGAAATAATGTCCCTCCTCAAAAAATTCATTGGAAAAAGAGGGGG
TGGAGGGTTCTTTTACATTGTTAAAGCTCATGGGGATATCTTTTTATTGTTATTATTTAT
TTTGAAGTGATAAACCCATAGAAATATTCTTGTGATGTTTGTTTTTGAGTAATACTAGCA
AAAAAAAATAAAAAAATCAACCGAACATTGTTTAGTTTTGATGATATAAATTTGTTGTGT
AAAAATAATGCTCATTAATTCTGCTTCGTAAAACTAAAGAAGCTTCAGTTTATGTTAAAA
ATACATAATGTATTTATGTTGGTTAAGGAAAAATTGTCTTAAAATAAAGTGGCTCTAAAT
CTTACACAAGTTTTGGGTTCACTATTTTGTGAGATAAACATTTTCAATGATTGCATACTA
ACACTATATATTGGTATTACATGAAGAAGACGATTGATAAGAAAATCAATTTAATTTTAT
AATTAGAGTTTGGAAGAAATAGTGTTAATTATGCATCCAAATATTATTCCTATTTTAAAA
ATAAAAAAGAGGCTATTTAAAAAAAAGATTCATATGCAATCAAGGTCACTTGAAACAAAT
TATAGAATAATAACAATAACAATTTATTTAACTGAAGCAAAGGAAAAATAACATATGACA
TATAATAAAAATAAAAGAATAAGAAACTCAATATAAACACTTCGAATATATATACATATA
TAA