Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g107490.2.1
CDS Infomation	basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT3G19500.1)
Sequence	ATGGCGGGTGAAGAAGAGAGTTCACTGGACGGAGGAACGTATTCGGAACTACTATTTGCC GACGACGATGATGGCCTAGCAGGATGTTTCAATTTCACTAATTCATCTTCCCCGAAAATG CTCTGTTTTGGTACTGATGCTCCTATACTTGAAACTTGTTCTGTACAAACATCAGAACAA AAAACCCCAAAATCTGAACTCACATGCAGTGGAGATTCACCATCTGCTTGTTCAAGTAGC AACATCAGCCAGCCTAACAACTCCAATAAAAGGCGAAATGGTGCAGAGAAAGAACCGGTT GAAAAAACAAAAGGTAGAAATCAGAGAAATTGCAAGAGGACAAAGATGGTAGAAAATTCA AATGTGACAACTCATGCAAAGGTTAAGAAAGAAAAGCTTGGTGAAAGAATCACAGCATTA CAACAACTTGTATCTCCCTTTGGCAAGACCGATACAGCATCAGTGCTACATGAAGCGATG GGATATATCAGGTTTTTGCACGATCAGGTTCACGTCTTGTGTTCTCCTTACTTGCAGCGC CAGACCCAGAGACAGTCTCCCTCTTTACGTGAGGGCGGGGAAACGGAAGCATCGAGAAAT GAGGTGTTGCTGAGGAGCAAAGGACTTTGTCTAGTGCCAGTAGAGGTGAGTGTCCATGTA GCTGATACTAGTCTCAACGGCGCTGATTTTTGGTCACCTGCCGCCATGATGAACAATAAT AATAGCATTACCCAATGA

Peptide Sequence

PEP ID	Solyc01g107490.2.1
PEP Infomation	basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT3G19500.1)
Sequence	MAGEEESSLDGGTYSELLFADDDDGLAGCFNFTNSSSPKMLCFGTDAPILETCSVQTSEQ KTPKSELTCSGDSPSACSSSNISQPNNSNKRRNGAEKEPVEKTKGRNQRNCKRTKMVENS NVTTHAKVKKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVHVLCSPYLQR QTQRQSPSLREGGETEASRNEVLLRSKGLCLVPVEVSVHVADTSLNGADFWSPAAMMNNN NSITQ*

Transcript Sequence

Transcript ID	Solyc01g107490.2.1
Transcript Infomation	basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT3G19500.1)
Sequence	AAATATAAACAATTTATGGATCGTTGTTCACAAGTTGCACTTTCTTTAAAATATACGGTA TAATTCATCCCTTTTTCGCACTTGTTAAACATTGTTTTAGATTTGACTGGACTTCTATAA TCTTGTCCACGTGCAAAAATCACCGTTCTGAACGTAATTAAAGTATTGTTTATTTACTTA AAAATCTTAATTACTAGATTGTAGACTCAATTGAATAATGTTCTTTCCATTCTTGGGGTC CGAGTATCAAACAGTAAAGAGTATGTTATATTAATATTCACTTAGAGAGAAAAAAAAAAA CTAGGTGATACCTAAATCATATTATTAGTAATATGATAATTTACTATCTATCAACTTTTT GTTCTAATTTTTAATCTTCATACCTTTCTATCTTAGTAGATTGTTTGATCATAATTTTAA ATTCTACTTATATTGTAAGTATTTTTTGGAAAAATAATATTATTTTTTTTTATTATAAAA AATGACAAAGTAAAAAAATAATTAAAAAATTAATATTAAACAAGTAAAACGGAACTGAGT GAATAGTGGTAAGGACTGTTGATGATCAAATAAAAACCAGCAAAAGTTTTGTTTTGTTGC ATTCCCAAAACAAAAACTTTGGGAGTGTGGACGAGAAAAGGTTAGCACGGTTTCTCGGGT GAATTGTTTGACTGAGACAATACAGTACAGTAGCGACGATACTACCGAAGCCAAAGTCCC CATTCATTTCTGCAACGCCCGTAACGCTTCCACTCGATTTTACACGACAGACACGTCCTT GTTCAAAACTCATTATTCTTATTACGTGGAACTCCCTCTTTATTTCACTTTTTATTTGAT TATGCTCAAAAAAAAAATTCATCTTAAAATTATATATTTCCTTCGTTTAAATTTACTTGA AAAAATTATTTTTAAATATTAATATTTACAAAATATAGCGGTCCAGGGTGCATATATCTA TGTTTGTCCCCGTATAAAAAAACTTTAAAAGAAGCTTCCGTCGTTTACTCCCAAAAACAA ATCCCCTTTTTCTCCATTAGGAAATACAGCAGAGCTAGTGTCAGACAGAGCAATGGCGGG TGAAGAAGAGAGTTCACTGGACGGAGGAACGTATTCGGAACTACTATTTGCCGACGACGA TGATGGCCTAGCAGGATGTTTCAATTTCACTAATTCATCTTCCCCGAAAATGCTCTGTTT TGGTACTGATGCTCCTATACTTGAAACTTGTTCTGTACAAACATCAGAACAAAAAACCCC AAAATCTGAACTCACATGCAGTGGAGATTCACCATCTGCTTGTTCAAGTAGCAACATCAG CCAGCCTAACAACTCCAATAAAAGGCGAAATGGTGCAGAGAAAGAACCGGTTGAAAAAAC AAAAGGTAGAAATCAGAGAAATTGCAAGAGGACAAAGATGGTAGAAAATTCAAATGTGAC AACTCATGCAAAGGTTAAGAAAGAAAAGCTTGGTGAAAGAATCACAGCATTACAACAACT TGTATCTCCCTTTGGCAAGACCGATACAGCATCAGTGCTACATGAAGCGATGGGATATAT CAGGTTTTTGCACGATCAGGTTCACGTCTTGTGTTCTCCTTACTTGCAGCGCCAGACCCA GAGACAGTCTCCCTCTTTACGTGAGGGCGGGGAAACGGAAGCATCGAGAAATGAGGTGTT GCTGAGGAGCAAAGGACTTTGTCTAGTGCCAGTAGAGGTGAGTGTCCATGTAGCTGATAC TAGTCTCAACGGCGCTGATTTTTGGTCACCTGCCGCCATGATGAACAATAATAATAGCAT TACCCAATGAACAATCCCTGGGCTCTTCTTTTTCATGTTTTTGGTGACCCCATTTTTGGA TGATCAAAACCACTGCTTGGGTGTTTGTTGGAAATTGTATAACTTCTAGGGAAATGGAAA AG