Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g107410.3.1
CDS Infomation	PHD-finger family homeodomain protein
Sequence	ATGTCAACTCTTGGAAACACATCTGTGTCACCTGAAAAGGCAAGAACAGCTGGTGGGGGC CATCACACTGCATCAGCAGGTAATATGTCTGAGAATCTTGGTGCTGACCAATCAAGAGAA TCATGTGAAAACACAGTTCAAAATCTTAATCAGTCAGAATATCGAGAGAAATCACCTGGT CAGCCTAGAAAAAGAAAATCTATTTCAGGATCCCCAATTAGCAGTACTAGACTTCTACGT TCGAAGTCGAAGGAGAAGTCTGGAGCTTCTGAGGCAAAAAATACTGTGGTAACTCATGAT GCTACCGAGGAAAAGAAAAGAAAAAGGAGAAAGAAAAAACACAGTAAACATATAGCTGCG AACGAATTCACAAGAATCAGGGGCCATCTGAGATACTTATTACAAAGAATAAAATATGAG CAAACCTTGATTGAAGCTTACTCTGGTGAAGGCTGGAAAGGACAAAGCTTAGAAAAGATA AAGCTGGAGAAGGAGCTACAACGAGCGAAGACTCATATTTTTCGTTACAAATTGAAAATA AGAGATTTGTTTCAACGCCTTGATACATTACTTGCTGAAGGGAGGCTTCCAGCATCTTTA TTTGACAATGAAGGGGAGATCGACAGTGAAGATATATTCTGTGCGAAGTGTGGCTCTATG GATCTGCCAGCTGATAATGATATTATTCTCTGTGATGGCGCTTGTGAGCGTGGATTTCAC CAGTTGTGTGTGGAGCCACCTCTGTTAAAAGAAGACATTCCACCTGATGATGAAGGCTGG CTTTGTCCTGGCTGTGATTGCAAAGTAGACTGCATTGACTTGCTTAATGATCTTCAAGGA ACAGATCTTTCTGTCACTGACAGCTGGGAGAAAGTATATCCCAAGGAAGCTGCTGCTGCT GCCTCCGGGGAAAAGCTGGATGATATTTCTGGTCTTCCATCAGATGACTCGGAGGATGAT GATTACAACCCTGAAGCTCCAGATGTAGGAAAAAATGATTCGGAAGATGAGTCGAGTTCT GATGAATCTGAATCTGATTTTTACTCTGCATCTGAAGACTTGGCAGAAGCCCCTACTAAA GATGATGAGATCTTGGGGCTTTCTTCTGAAGACTCGGAAGATGATGACTATAATCCTGAT GATCCAGATAAGGATGAGCCGGTTAAAACAGAAAGTTCAAGTTCTGATTTTACGTCCGAC TCTGAGGATTTTAGTCTGATAGTTGATACTAATAGGTTGCGAGGTGATGAACAAGGGGTT TCCAGCTCAGTAGATAACAGTATGCCAAACTCGGTTTCCCTAAAGGAAAAAGCTAAAGTT GGCAAAGCTAAAGGGAATTCGCTGAAGGATGAGTTGTCTTATCTTATGCAGTCTGATAGC CCTCTTGTCTCTGCCAAAAGGCACATAGAGAGGTTGGACTACAAAAAGCTGCACGATGAA ACATATGGAAATGGGTCTTCTGATTCTAGTGATGAAGATTATGATGATGGTCCTTTACCC AAGGTGAGAAAGTTGAGAAACGCCAAAGGTGCTATGGCTGCTCCTAGTTCGACTCCTGCA GATATCAAGTATCAAAGTGGGAAACAAAAAGGGAGTGGGCATGCTTCTGATAGTGGAATC TCTGAGAAACTCAAAGTTGGAGGCACGGGCACCTCCGAATCTCCTTCAAGTGGTAAAAGA AAAACATATGGAGAAGTCTCCACCAAGAGACTATATGAATCCTTCAAGGACAATCAGTAT CCTGACCGTGACGCAAAGGAGAAGTTGGGTAAAGAATTAGGGCTAACAGCTCACCAGGTC AGTAAATGGTTTGAAAATGCTCGTCATTGCCATCGTCATTCTCCTAACTGGAAAAAAATT ATGAGTCATAAAGTGTCGGAAGAATCTCCATCCAAATCACAGATAATTGGAGAACCACTT GGAACTGAATCTAATAGTATCATTGCTTCCTGCAATGGGGTTGAGAAATTGGAACAACCA AAGCAATGTCTAAATGGAGAAAAAGGTCATGCAATAGATAAGAGTGAAGAAGAATTGTTG ATACAGGACACCAGTGGAAAAAAATCTAGTGAACCAACTAAAAAAGTTCATACGACAAAT GAAGGATCAGAGGACACTCCCCGCAGTAAGACTTCCAAGAAGCAGAAGGCAAAAGTTGGT ACTGCGAATGATAATACAACAGAACAAGCATCGGGTGGCACTCCCTGCAGTAAGACTTAC AAGAAGCAGAAGGCAAAAGTTGGTACTGCAAATTCTCAGAACGATAATACAACAGATCAA GGACCAGATGATACTCCTCAAAGTAAGACTCGCAAGAAGCCGATGGTGAAGGTTGATACC CCGAATTCTCAGAACGTCCGTAGAAGTAGTAGGTTGCAGAAACAAGGCTGA

Peptide Sequence

PEP ID	Solyc01g107410.3.1
PEP Infomation	PHD-finger family homeodomain protein
Sequence	MSTLGNTSVSPEKARTAGGGHHTASAGNMSENLGADQSRESCENTVQNLNQSEYREKSPG QPRKRKSISGSPISSTRLLRSKSKEKSGASEAKNTVVTHDATEEKKRKRRKKKHSKHIAA NEFTRIRGHLRYLLQRIKYEQTLIEAYSGEGWKGQSLEKIKLEKELQRAKTHIFRYKLKI RDLFQRLDTLLAEGRLPASLFDNEGEIDSEDIFCAKCGSMDLPADNDIILCDGACERGFH QLCVEPPLLKEDIPPDDEGWLCPGCDCKVDCIDLLNDLQGTDLSVTDSWEKVYPKEAAAA ASGEKLDDISGLPSDDSEDDDYNPEAPDVGKNDSEDESSSDESESDFYSASEDLAEAPTK DDEILGLSSEDSEDDDYNPDDPDKDEPVKTESSSSDFTSDSEDFSLIVDTNRLRGDEQGV SSSVDNSMPNSVSLKEKAKVGKAKGNSLKDELSYLMQSDSPLVSAKRHIERLDYKKLHDE TYGNGSSDSSDEDYDDGPLPKVRKLRNAKGAMAAPSSTPADIKYQSGKQKGSGHASDSGI SEKLKVGGTGTSESPSSGKRKTYGEVSTKRLYESFKDNQYPDRDAKEKLGKELGLTAHQV SKWFENARHCHRHSPNWKKIMSHKVSEESPSKSQIIGEPLGTESNSIIASCNGVEKLEQP KQCLNGEKGHAIDKSEEELLIQDTSGKKSSEPTKKVHTTNEGSEDTPRSKTSKKQKAKVG TANDNTTEQASGGTPCSKTYKKQKAKVGTANSQNDNTTDQGPDDTPQSKTRKKPMVKVDT PNSQNVRRSSRLQKQG*

Transcript Sequence

Transcript ID	Solyc01g107410.3.1
Transcript Infomation	PHD-finger family homeodomain protein
Sequence	AAAGTTATATAAGAAAGAGTTGGGTCAAGCTTAAGCCCATAAAAAAGCGTCACATTTTGG GTGAGGCGAAAGAGAGGGAAACAGTGGCGGCGCGGCAAAAGTGAGTGTTAAATTCTATTG CTTGAAAAATACCACCCCGCCCGCACCCTGATTTCAAGGGAACCAAAAACTGCACCGACG AGCTTTCATCTTCCATCGGTTTAGAGAGAAAGCCTCGTTAACACCAATTATCTACCAGCC ATTCTTCCTATTTTTCATACTCTCATCCACTCACTTACTCTTTCTCTCAAAAATACACAT TCACTTTGAAGCCCTAGTTTCCCAGATTCTAAATTCAAACTCTCGCTGTCTGTGATTTCT TTATCTGCAAACAAAGAGAAGCAATATTGGATTTTCAGTTTGGAGTATAAGAAATTTAGC CCTCCTTGGTCTTTGTGAGAATTGAGAGAGTGAATTTCTAGTGATCTTGTATCACTGAAA TATTCATCTCTGCGGGAACTTAGAACTTCAGTACAGAGGTCATTAAGATGAAAATAAAGA GAAGAAACTAACTAGTGGAAAAGCAGGTATAGTAGGATTTACATAGAGGATGACTGTCTT GTGAAGACATTTTTGGTAATGCCAATCGGGAAGTGACGAGACTTCAGCTAGAAGATCAAA CCGAGATGTCAACTCTTGGAAACACATCTGTGTCACCTGAAAAGGCAAGAACAGCTGGTG GGGGCCATCACACTGCATCAGCAGGTAATATGTCTGAGAATCTTGGTGCTGACCAATCAA GAGAATCATGTGAAAACACAGTTCAAAATCTTAATCAGTCAGAATATCGAGAGAAATCAC CTGGTCAGCCTAGAAAAAGAAAATCTATTTCAGGATCCCCAATTAGCAGTACTAGACTTC TACGTTCGAAGTCGAAGGAGAAGTCTGGAGCTTCTGAGGCAAAAAATACTGTGGTAACTC ATGATGCTACCGAGGAAAAGAAAAGAAAAAGGAGAAAGAAAAAACACAGTAAACATATAG CTGCGAACGAATTCACAAGAATCAGGGGCCATCTGAGATACTTATTACAAAGAATAAAAT ATGAGCAAACCTTGATTGAAGCTTACTCTGGTGAAGGCTGGAAAGGACAAAGCTTAGAAA AGATAAAGCTGGAGAAGGAGCTACAACGAGCGAAGACTCATATTTTTCGTTACAAATTGA AAATAAGAGATTTGTTTCAACGCCTTGATACATTACTTGCTGAAGGGAGGCTTCCAGCAT CTTTATTTGACAATGAAGGGGAGATCGACAGTGAAGATATATTCTGTGCGAAGTGTGGCT CTATGGATCTGCCAGCTGATAATGATATTATTCTCTGTGATGGCGCTTGTGAGCGTGGAT TTCACCAGTTGTGTGTGGAGCCACCTCTGTTAAAAGAAGACATTCCACCTGATGATGAAG GCTGGCTTTGTCCTGGCTGTGATTGCAAAGTAGACTGCATTGACTTGCTTAATGATCTTC AAGGAACAGATCTTTCTGTCACTGACAGCTGGGAGAAAGTATATCCCAAGGAAGCTGCTG CTGCTGCCTCCGGGGAAAAGCTGGATGATATTTCTGGTCTTCCATCAGATGACTCGGAGG ATGATGATTACAACCCTGAAGCTCCAGATGTAGGAAAAAATGATTCGGAAGATGAGTCGA GTTCTGATGAATCTGAATCTGATTTTTACTCTGCATCTGAAGACTTGGCAGAAGCCCCTA CTAAAGATGATGAGATCTTGGGGCTTTCTTCTGAAGACTCGGAAGATGATGACTATAATC CTGATGATCCAGATAAGGATGAGCCGGTTAAAACAGAAAGTTCAAGTTCTGATTTTACGT CCGACTCTGAGGATTTTAGTCTGATAGTTGATACTAATAGGTTGCGAGGTGATGAACAAG GGGTTTCCAGCTCAGTAGATAACAGTATGCCAAACTCGGTTTCCCTAAAGGAAAAAGCTA AAGTTGGCAAAGCTAAAGGGAATTCGCTGAAGGATGAGTTGTCTTATCTTATGCAGTCTG ATAGCCCTCTTGTCTCTGCCAAAAGGCACATAGAGAGGTTGGACTACAAAAAGCTGCACG ATGAAACATATGGAAATGGGTCTTCTGATTCTAGTGATGAAGATTATGATGATGGTCCTT TACCCAAGGTGAGAAAGTTGAGAAACGCCAAAGGTGCTATGGCTGCTCCTAGTTCGACTC CTGCAGATATCAAGTATCAAAGTGGGAAACAAAAAGGGAGTGGGCATGCTTCTGATAGTG GAATCTCTGAGAAACTCAAAGTTGGAGGCACGGGCACCTCCGAATCTCCTTCAAGTGGTA AAAGAAAAACATATGGAGAAGTCTCCACCAAGAGACTATATGAATCCTTCAAGGACAATC AGTATCCTGACCGTGACGCAAAGGAGAAGTTGGGTAAAGAATTAGGGCTAACAGCTCACC AGGTCAGTAAATGGTTTGAAAATGCTCGTCATTGCCATCGTCATTCTCCTAACTGGAAAA AAATTATGAGTCATAAAGTGTCGGAAGAATCTCCATCCAAATCACAGATAATTGGAGAAC CACTTGGAACTGAATCTAATAGTATCATTGCTTCCTGCAATGGGGTTGAGAAATTGGAAC AACCAAAGCAATGTCTAAATGGAGAAAAAGGTCATGCAATAGATAAGAGTGAAGAAGAAT TGTTGATACAGGACACCAGTGGAAAAAAATCTAGTGAACCAACTAAAAAAGTTCATACGA CAAATGAAGGATCAGAGGACACTCCCCGCAGTAAGACTTCCAAGAAGCAGAAGGCAAAAG TTGGTACTGCGAATGATAATACAACAGAACAAGCATCGGGTGGCACTCCCTGCAGTAAGA CTTACAAGAAGCAGAAGGCAAAAGTTGGTACTGCAAATTCTCAGAACGATAATACAACAG ATCAAGGACCAGATGATACTCCTCAAAGTAAGACTCGCAAGAAGCCGATGGTGAAGGTTG ATACCCCGAATTCTCAGAACGTCCGTAGAAGTAGTAGGTTGCAGAAACAAGGCTGAAGAG TGGAAGTTCCAAATTCTGGAATCTCTTGTGTGGAACATTATCTAACCTGGAAGTTTTCTG ATATCGGTGAACGGTTAGAGATTGAAACGTTAGCTCGTTGTAGGTGGAACTTTGCAGTAC AGAATCATGTGGAGTCCTCCGGTCAATCTTAACTCATTCTGAATATGCATCATGGAGAGT CCGAGATATGAGCTGAATTTTGTTCTTAGTAGTTGCCCAGTGATTAAAGCTGTGGATCTA TCAGGGACTAGATGGTATTTAAATTTCAATTATGCTATACATTTACGTCTCAATCGTACA GTAGACATGGTACGGTGTTGCAGATGAAAATGTCTCTTTTCTTTTTATTTACTTGGTTTT CATTGTCCTTCCGTTGTGTAACTGTCAGTAAAGATTAACCTATTTCAGTTAAATTGCTGC TCCATTTTGGTGAAGACAAATATATCATTTGTTAAGAATTGAATTAC