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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g107390.3.1
CDS Infomation

GH3 (AHRD V3.3 *** E2FHL1_9ROSI)
Sequence

ATGCCAACAATTAAAGAAGAGTTAGATCGTCGCCAGCTACTTTACAGTCTTCTTATGCCA
GTTATGAACCTATACGTGCCTGGATTAGACAAAGGCAAAGGACTATACTTCTTGTTTATC
AAATCCGAGACGAAAACTCCAGGTGGGCTATTGGCCCGACCCGTTTTGACAAGCTATTAC
AAAAGTGAACATTTCAAAAGCAGACCTCATGACCCGTACAATGTTTACACAAGCCCAAAT
GAAACAATCCTTTGTTCCGACTCTTTCCAGAGCATGTACACTCAAATGCTCTGCGGTCTC
TATGAGCGCGAGCAAGTTCTTCGCCTCGGTGCTGTTTTTGCCTCGGGCCTTGTCCGAGCC
ATTCGATTCTTGCAGCTCCACTGGGAGGAACTTGCTCATGACATTCGAACTGGAACTCTG
AACCCACAAATTACCAACCCTTCTGTTTGCGAGCGGATGGGTAAAATCATTAAACCGAAT
CCAGAGCTAGCTGATTTTGTTGCAAATGAATGTTGTAAAGAAAATTGGGAAGGAATTATC
ACGAGGATTTGGCCTAAGACAAAGTACCTTGACGTTATCGTTACGGGTGCTATGGCTCAG
TACATTCCTACCCTTGATTATTACAGTGGTGGATTACCAAAAGCATGCACTATGTACGCA
GCTTCCGAGTGTTACTTTGGGCTTAATTTAAATCCCATGTGTAAGCCCTCGGAAGTTTCG
TACACCATCATGCCAAACATGGGTTATTTTGAATTTTTACCCCATGACCCTACATCAACA
ACAACAACTTCCTCACCTACCAATCTCGTTGACCTTGTCGATGTTGAAGTTGGAAAAGAG
TACGAGCTCGTCATCACAACATACGCCGGTTTATACCGTTACAGAGTCGGAGACATCCTC
CGAGTCACCGGGTTTCACAACTCAGCCCCGCAGTTCCATTTTGTCCGGAGAAAAAATGTT
CTATTGAGCATTGACTCTGACAAAACTGATGAAGCTGAGTTACAGGGAGCCGTAGAGAAT
GCTTCGAAATTACTCAGGGAATTCAACACCAGCGTGGTTGAGTACACTAGTTATGCAGAT
ACAAAGACAATTCCAGGACATTACGTGATATATTGGGAGTTATTAATGAAGGATTTGAAC
AATTCTCCTAGCGATGAAGTATTGAACCAATGTTGTTTAGCGATGGAAGAGTCACTCAAC
ACAGTTTATCGACAAGGGCGAGTTGCTTGTAACTCAATTGGTCCATTGGAAATTCGAGTG
GTGAAAAATGGTACATTTGAAGAATTAATGGATTATGCAATTTCAAGAGGTGCTTCAATT
AACCAATATAAGGTGCCTAGATGTGTGAACTTTGCACCTATTTTGGAACTTCTTGACTCA
AGAGTAATGTCAAGACACTTTAGCCCATCCTTACCTCAATGGACACCTGAACGACGTCGT
TGA

Peptide Sequence

PEP ID

Solyc01g107390.3.1
PEP Infomation

GH3 (AHRD V3.3 *** E2FHL1_9ROSI)
Sequence

MPTIKEELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFIKSETKTPGGLLARPVLTSYY
KSEHFKSRPHDPYNVYTSPNETILCSDSFQSMYTQMLCGLYEREQVLRLGAVFASGLVRA
IRFLQLHWEELAHDIRTGTLNPQITNPSVCERMGKIIKPNPELADFVANECCKENWEGII
TRIWPKTKYLDVIVTGAMAQYIPTLDYYSGGLPKACTMYAASECYFGLNLNPMCKPSEVS
YTIMPNMGYFEFLPHDPTSTTTTSSPTNLVDLVDVEVGKEYELVITTYAGLYRYRVGDIL
RVTGFHNSAPQFHFVRRKNVLLSIDSDKTDEAELQGAVENASKLLREFNTSVVEYTSYAD
TKTIPGHYVIYWELLMKDLNNSPSDEVLNQCCLAMEESLNTVYRQGRVACNSIGPLEIRV
VKNGTFEELMDYAISRGASINQYKVPRCVNFAPILELLDSRVMSRHFSPSLPQWTPERRR
*

Transcript Sequence

Transcript ID

Solyc01g107390.3.1
Transcript Infomation

GH3 (AHRD V3.3 *** E2FHL1_9ROSI)
Sequence

CCTCAAACGCTTTAAATTGGACGGCGTTACTGACCGTGAAACCTTTAAATCCATTATTCC
GGTCGTAACTTATGAAGATCTTCAACCGGAGATTCAACGGATCGCTAACGGCGATCGTTC
TCCTATATTATCCGCTCATCCCATCTCTGAATTCCTCACTAGCTCTGGAACGTCAGCTGG
TGAAAGGAAACTGATGCCAACAATTAAAGAAGAGTTAGATCGTCGCCAGCTACTTTACAG
TCTTCTTATGCCAGTTATGAACCTATACGTGCCTGGATTAGACAAAGGCAAAGGACTATA
CTTCTTGTTTATCAAATCCGAGACGAAAACTCCAGGTGGGCTATTGGCCCGACCCGTTTT
GACAAGCTATTACAAAAGTGAACATTTCAAAAGCAGACCTCATGACCCGTACAATGTTTA
CACAAGCCCAAATGAAACAATCCTTTGTTCCGACTCTTTCCAGAGCATGTACACTCAAAT
GCTCTGCGGTCTCTATGAGCGCGAGCAAGTTCTTCGCCTCGGTGCTGTTTTTGCCTCGGG
CCTTGTCCGAGCCATTCGATTCTTGCAGCTCCACTGGGAGGAACTTGCTCATGACATTCG
AACTGGAACTCTGAACCCACAAATTACCAACCCTTCTGTTTGCGAGCGGATGGGTAAAAT
CATTAAACCGAATCCAGAGCTAGCTGATTTTGTTGCAAATGAATGTTGTAAAGAAAATTG
GGAAGGAATTATCACGAGGATTTGGCCTAAGACAAAGTACCTTGACGTTATCGTTACGGG
TGCTATGGCTCAGTACATTCCTACCCTTGATTATTACAGTGGTGGATTACCAAAAGCATG
CACTATGTACGCAGCTTCCGAGTGTTACTTTGGGCTTAATTTAAATCCCATGTGTAAGCC
CTCGGAAGTTTCGTACACCATCATGCCAAACATGGGTTATTTTGAATTTTTACCCCATGA
CCCTACATCAACAACAACAACTTCCTCACCTACCAATCTCGTTGACCTTGTCGATGTTGA
AGTTGGAAAAGAGTACGAGCTCGTCATCACAACATACGCCGGTTTATACCGTTACAGAGT
CGGAGACATCCTCCGAGTCACCGGGTTTCACAACTCAGCCCCGCAGTTCCATTTTGTCCG
GAGAAAAAATGTTCTATTGAGCATTGACTCTGACAAAACTGATGAAGCTGAGTTACAGGG
AGCCGTAGAGAATGCTTCGAAATTACTCAGGGAATTCAACACCAGCGTGGTTGAGTACAC
TAGTTATGCAGATACAAAGACAATTCCAGGACATTACGTGATATATTGGGAGTTATTAAT
GAAGGATTTGAACAATTCTCCTAGCGATGAAGTATTGAACCAATGTTGTTTAGCGATGGA
AGAGTCACTCAACACAGTTTATCGACAAGGGCGAGTTGCTTGTAACTCAATTGGTCCATT
GGAAATTCGAGTGGTGAAAAATGGTACATTTGAAGAATTAATGGATTATGCAATTTCAAG
AGGTGCTTCAATTAACCAATATAAGGTGCCTAGATGTGTGAACTTTGCACCTATTTTGGA
ACTTCTTGACTCAAGAGTAATGTCAAGACACTTTAGCCCATCCTTACCTCAATGGACACC
TGAACGACGTCGTTGAAGAGGAGGAGAAGTGTTTATTAATTACACATGCATCAGTAGAGG
AGAGTCAATGAAGGATGTGATTCCCTAAAACTTTTTTTTTGTCTTTCTTTTTTTAATTTT
ATTTTCTTGTCTTACTTTTGTGATTAGATTGTAACTAGACGAGGACGTTCAGCAGAATTA
GGTTTGTACGTTATGGCTCAGTTAACCTGTGAAAATGATGTATCCATGCTTGTTAAATGA
ACTGTTTCTTTCTTCCAAGTTCAGCTC