Plant GARDEN How To ▶︎

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Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g107180.3.1

CDS Infomation

Phototropic-responsive NPH3 family protein (AHRD V3.3 *** B9HMY5_POPTR)

Sequence

ATGAAGTTCATGAAACTTGGATCCAAGCCTGATAATTTTCAAACAGATGGGAACAATGTC
AGATATGTTGCTTCAGAGTTGGCCTCGGACATCGCTATCAATGTAGGAGATGTGAAGTTT
TATCTGCATAAGTTTCCTCTCCTTTCCAAGAGTGCCACTTTGCAAAAGCTGGTTTCTAAT
GCAAGTGAAGGGAATAGTGACGAAGTTGACATTCATGACATTCCTGGAGGACCTAGTGCT
TTTGAAATATGTGCCAAGTTTTGTTACGGCATGACTGTTACACTGAATGCTTATAATGTC
ATTTCTACAAGGTGTGCTGCTGAGTATCTCGGTATGAATGAAAGTCTTGAGAAAGGAAAC
CTGATCTACAAGATTGATGTTTTCCTGAACTCTAGCATTTTCCGAAGTTGGAAAGACTCA
ATAATAGTTCTTCAGACTACTAAGTCTCAATCACGCATGTGCGAGGAACTGAAGTTGACC
AGCCACTGCATTGATGCTGTAGCATCCAGGGCTTCCGTTGATGTTTCCAGGGTGGATTGG
TCCTATACCTATAATCGTAAAAAGCTTCCAGAGGAGAATGGAAATGATCCTAACTTGAAT
GGAATTAGATGCCGCATGGTGCCAAAAGATTGGTGGGTTGAGGATTTATGTGAACTTGAA
GTAGACCTATATAAGCGGGTGGTTATCACCATAAAAAACAAAGGGATTGTTTCTTCTGAA
GCTATTGGAGAAGCTGCCAAAGCTTATGCATATAGAAGGTTTCCAGGCTTTAATAAAGGA
GCCTTCCAATTCAATGATGTCTCCAAATGTCGCCCAATATTGGATACGGTGGTATGGCTA
TTGCCCTCTGAGAAAGGTTGCGTCTCTTGTAGTTTCTTGTTTAAATTGCTAAAAGCATCA
ATTTCACTAGACTCTGGAGAAACTGTGAAGGCAGAACTAGTCAAGAGAATAGGACAGCAA
TTGGAAGAATCTTCTGTGAATGATCTTTTGATTCGAGCGGCAGATGGGGAAGGAACCATG
TATGATGCCCATGTTGTACAGAAAATACTAGAAGCGTTTATGATGAGAGATAAGGATTCT
GAACCTCAGTTAGAAGATGAAGATGAAATTCAGGAGGTCCGAAAGCCAGGGATTTTATCA
GAAGCTTCAAAACTGATGGTGGCAAAGCTAGTTGATGGATATCTTACCGAAATTGCAAGA
GATCCTAATCTCCCTATATCAACATTTGTTGGTCTGGCAGAGATGGTATCTAATTTCCCT
CGACCCGGTCATGATGGAATTTATCGCGCAATTGATATGTACCTTAAGGAGCATCCTGGA
ATCAGCAAGAGTGAGAGGAAAAGAATTTGTAAGCTGATGGACTGCAAGAAGCTCTCTGTG
GATGCTTGTATGCATGCTGTCCAAAATGAGAGGCTTCCCCTTCGTGTTGTTGTACAAGTG
CTGTTTTTTGAGCAAGTCAGGGCTAACGCCTCATCTGGAAGCAGTACTCCGGATCTTCCA
AAAGCAATTAGGGACCTTAACAGTACTTCATATGGAAGCTCAAGATCTGCAACAACTAAT
ACAGAAGAAGATTGGGATGCTGCAGCCTCTGCAGAAGAACTCAGGGCTTTGAGGGGAGAG
TTGGCAGCCTTAAGAATGGGAAATGGAGGAACAAATGACAAAGTCAATGTTATTGATGCC
AAGAGCCATGCAGACAGGGCTGCTATGAGTAAAATGAAAGGTTTGCTCATGTCAAAGAGG
CTCTTTTCGAAAATCTGGTCAAACAAAGGTGGACAAGGGGAGAATAGTGGCTCAGATTCG
TCCGAGAGTCTTGGATCTGCTAATAACTTGGAAGAAGCTAAATCTACACCTTCAAGAAAA
GTAAGGCATTCAGTTTCTTAG

Peptide Sequence

PEP ID

Solyc01g107180.3.1

PEP Infomation

Phototropic-responsive NPH3 family protein (AHRD V3.3 *** B9HMY5_POPTR)

Sequence

MKFMKLGSKPDNFQTDGNNVRYVASELASDIAINVGDVKFYLHKFPLLSKSATLQKLVSN
ASEGNSDEVDIHDIPGGPSAFEICAKFCYGMTVTLNAYNVISTRCAAEYLGMNESLEKGN
LIYKIDVFLNSSIFRSWKDSIIVLQTTKSQSRMCEELKLTSHCIDAVASRASVDVSRVDW
SYTYNRKKLPEENGNDPNLNGIRCRMVPKDWWVEDLCELEVDLYKRVVITIKNKGIVSSE
AIGEAAKAYAYRRFPGFNKGAFQFNDVSKCRPILDTVVWLLPSEKGCVSCSFLFKLLKAS
ISLDSGETVKAELVKRIGQQLEESSVNDLLIRAADGEGTMYDAHVVQKILEAFMMRDKDS
EPQLEDEDEIQEVRKPGILSEASKLMVAKLVDGYLTEIARDPNLPISTFVGLAEMVSNFP
RPGHDGIYRAIDMYLKEHPGISKSERKRICKLMDCKKLSVDACMHAVQNERLPLRVVVQV
LFFEQVRANASSGSSTPDLPKAIRDLNSTSYGSSRSATTNTEEDWDAAASAEELRALRGE
LAALRMGNGGTNDKVNVIDAKSHADRAAMSKMKGLLMSKRLFSKIWSNKGGQGENSGSDS
SESLGSANNLEEAKSTPSRKVRHSVS*

Transcript Sequence

Transcript ID

Solyc01g107180.3.1

Transcript Infomation

Phototropic-responsive NPH3 family protein (AHRD V3.3 *** B9HMY5_POPTR)

Sequence

AATAATTCAACTGCACCACAACTATGTTGATCACTTACATTATTACCGTCATTAAAAATA
TATATTAAACAAAATATTAGTAATATATAAAGTTAATGCACACATTTTTCTTTTAATTCA
TTCTACATTCAACGTACTCATTTGACTTATTTGATACGTGAATTAAGATTGAATAATCTA
GAATTAAATTTATATTACGTTTTTTTTATTATTCCACTATCAATTAAATACAATGTAAAT
TTTATCTTAGTTCTATCATCTTAATATCATTTCATCTTAATTTTTTCAAACTAAATATTA
ATTAGTTTGGAAATTATAATATCAAAATTATGATTCTAGAATAATATAGTCATAAAACCA
ATCACTTTAAAGAGGAGAAAAACAGAGAAGGGAGGGAGCAAGAAAGCAGAGTGTCAGTAT
GGCGTGCATATCATAGCAAATTGGGTGTCTTCATCACTACAACCTTCTCAATCTTTTGGT
ACTGAAATAGATAATAGTTTTCCCACTTTGCCCTGAAAATTACAGAGTGAAAAAAAAATA
GGAAAAAGGTTTAAAAAAACATAAAAAGGAAAAAAAGAAGAAGCAAATACTCTTAAATTT
GAGTGGACTTGTGCCTTTTTATTGTTTGTCCTTTGATAAGAAATGGTAAAATAGAAAACT
TCTGATACCATAAAGTTGTTTTGCTGATTCTAGCAAAACTGATTAGATGCTTGCTGTCTC
CCGTTTTGGTGGTGCCTTCAACTGATACCAAGATGCTGTTTTCTGTTGCAGTGATTTGTT
GAGTACTTAAAGGAAGTAAATTTTCTCTAGTGTATACAAATATCAGATCTTTCTAAGTTG
TCAAGATGAAGTTCATGAAACTTGGATCCAAGCCTGATAATTTTCAAACAGATGGGAACA
ATGTCAGATATGTTGCTTCAGAGTTGGCCTCGGACATCGCTATCAATGTAGGAGATGTGA
AGTTTTATCTGCATAAGTTTCCTCTCCTTTCCAAGAGTGCCACTTTGCAAAAGCTGGTTT
CTAATGCAAGTGAAGGGAATAGTGACGAAGTTGACATTCATGACATTCCTGGAGGACCTA
GTGCTTTTGAAATATGTGCCAAGTTTTGTTACGGCATGACTGTTACACTGAATGCTTATA
ATGTCATTTCTACAAGGTGTGCTGCTGAGTATCTCGGTATGAATGAAAGTCTTGAGAAAG
GAAACCTGATCTACAAGATTGATGTTTTCCTGAACTCTAGCATTTTCCGAAGTTGGAAAG
ACTCAATAATAGTTCTTCAGACTACTAAGTCTCAATCACGCATGTGCGAGGAACTGAAGT
TGACCAGCCACTGCATTGATGCTGTAGCATCCAGGGCTTCCGTTGATGTTTCCAGGGTGG
ATTGGTCCTATACCTATAATCGTAAAAAGCTTCCAGAGGAGAATGGAAATGATCCTAACT
TGAATGGAATTAGATGCCGCATGGTGCCAAAAGATTGGTGGGTTGAGGATTTATGTGAAC
TTGAAGTAGACCTATATAAGCGGGTGGTTATCACCATAAAAAACAAAGGGATTGTTTCTT
CTGAAGCTATTGGAGAAGCTGCCAAAGCTTATGCATATAGAAGGTTTCCAGGCTTTAATA
AAGGAGCCTTCCAATTCAATGATGTCTCCAAATGTCGCCCAATATTGGATACGGTGGTAT
GGCTATTGCCCTCTGAGAAAGGTTGCGTCTCTTGTAGTTTCTTGTTTAAATTGCTAAAAG
CATCAATTTCACTAGACTCTGGAGAAACTGTGAAGGCAGAACTAGTCAAGAGAATAGGAC
AGCAATTGGAAGAATCTTCTGTGAATGATCTTTTGATTCGAGCGGCAGATGGGGAAGGAA
CCATGTATGATGCCCATGTTGTACAGAAAATACTAGAAGCGTTTATGATGAGAGATAAGG
ATTCTGAACCTCAGTTAGAAGATGAAGATGAAATTCAGGAGGTCCGAAAGCCAGGGATTT
TATCAGAAGCTTCAAAACTGATGGTGGCAAAGCTAGTTGATGGATATCTTACCGAAATTG
CAAGAGATCCTAATCTCCCTATATCAACATTTGTTGGTCTGGCAGAGATGGTATCTAATT
TCCCTCGACCCGGTCATGATGGAATTTATCGCGCAATTGATATGTACCTTAAGGAGCATC
CTGGAATCAGCAAGAGTGAGAGGAAAAGAATTTGTAAGCTGATGGACTGCAAGAAGCTCT
CTGTGGATGCTTGTATGCATGCTGTCCAAAATGAGAGGCTTCCCCTTCGTGTTGTTGTAC
AAGTGCTGTTTTTTGAGCAAGTCAGGGCTAACGCCTCATCTGGAAGCAGTACTCCGGATC
TTCCAAAAGCAATTAGGGACCTTAACAGTACTTCATATGGAAGCTCAAGATCTGCAACAA
CTAATACAGAAGAAGATTGGGATGCTGCAGCCTCTGCAGAAGAACTCAGGGCTTTGAGGG
GAGAGTTGGCAGCCTTAAGAATGGGAAATGGAGGAACAAATGACAAAGTCAATGTTATTG
ATGCCAAGAGCCATGCAGACAGGGCTGCTATGAGTAAAATGAAAGGTTTGCTCATGTCAA
AGAGGCTCTTTTCGAAAATCTGGTCAAACAAAGGTGGACAAGGGGAGAATAGTGGCTCAG
ATTCGTCCGAGAGTCTTGGATCTGCTAATAACTTGGAAGAAGCTAAATCTACACCTTCAA
GAAAAGTAAGGCATTCAGTTTCTTAGTTCTAACAGCTTTTAGGAATGCATTGTTGGTGGC
CTTTTTTTGAACTTAAAAAATGATGTTAGCATATGTCAAAAGACTAGTCATCTTTCTCTG
AAGTCTCTAGAAGAAAATTGAAGGATATAGTATTAACAAAAAGTTTGTAGGATGAAATGA
AGCCCCTCTTATGAGCCAAAAAAACAGAGCTTTTATTGTATAGATGTTCTAACATTAGGT
GGCTCTTAAATTTTATGACTTTCTGGTGTGCTATTATCATATAAGAAATTTTACTGTGAA
TTTAGACTTAAGACAGTCTAAGCAGCACACTGTCACTTATGAATGGCAAAGGTAAGTTCA
TTTTATATATACATTTCATTTCCCAGTATGAG