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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g106790.3.1
CDS Infomation

Tubulin alpha-6 chain, putative (AHRD V3.3 *** A0A072VQC5_MEDTR)
Sequence

ATGGCATCTTTACAGTTATTGAAGTCTCCATTCTCATCATTTTCTCAATCTAATTCTAGT
CGTTTTTCCACTATAGTACAAAGAAGGATTTTGGGTGTGAGATATCAAAGGAAAAATCCA
ATCTTGAAGACATTTGTTGATACAAAGTTTAGGGTTAGTTGTAGAATTCAAGACAACGAA
AATCAGAGTAATGGTGAAGAACCACCAGAGTCATTGTTTATGAAAGAGTTGAGAAGACGT
GGCATGAATCCAACTTCATTGCTTGAGGAGACAAACACAAACATCAAAGAAGACGAGGAG
ACAAAATCTAGGGAAGAAGATGGAGGCTTCTACCGCAGAAATGCACTGTCAACAGATTCT
GAAAGAAATTTGACTAATCAAAGGGAACAGTCTATGGCACTGAATAGTGAAGGCCTTGAG
GGTTTGATTCCACGGGCAAAAATTTTGCTTACTCTTGGTGGAACATTCTTTTTGGCTTTT
TGGCCGTTGATCCTTGTAACTATTGCAGCTTTCTTGGGTTTATACCTGTATTTTGGACCT
TCTTTTGTGCATTACGCGACCAACAGATCGACAGATCCACCACCATATGTTGACCCTTAT
GTGCTACTCGAAGAAGAGAGGATATCACAGACAGCTCCACGTCTAAATTGA

Peptide Sequence

PEP ID

Solyc01g106790.3.1
PEP Infomation

Tubulin alpha-6 chain, putative (AHRD V3.3 *** A0A072VQC5_MEDTR)
Sequence

MASLQLLKSPFSSFSQSNSSRFSTIVQRRILGVRYQRKNPILKTFVDTKFRVSCRIQDNE
NQSNGEEPPESLFMKELRRRGMNPTSLLEETNTNIKEDEETKSREEDGGFYRRNALSTDS
ERNLTNQREQSMALNSEGLEGLIPRAKILLTLGGTFFLAFWPLILVTIAAFLGLYLYFGP
SFVHYATNRSTDPPPYVDPYVLLEEERISQTAPRLN*

Transcript Sequence

Transcript ID

Solyc01g106790.3.1
Transcript Infomation

Tubulin alpha-6 chain, putative (AHRD V3.3 *** A0A072VQC5_MEDTR)
Sequence

CGGCGACACACATGATCGATGCTCGGCTGAATATTTATGGCTACAAATTTGCCAAATCAT
TGTCAAAAAATTGTAAGGTACACCGGTGGAGTGAGAAACAGTAATACTGCCGCCGTTTAA
CTAAATGAAGCTTCTTGAATTTTAGCAAATTTGATCATTGAAAAATGGCATCTTTACAGT
TATTGAAGTCTCCATTCTCATCATTTTCTCAATCTAATTCTAGTCGTTTTTCCACTATAG
TACAAAGAAGGATTTTGGGTGTGAGATATCAAAGGAAAAATCCAATCTTGAAGACATTTG
TTGATACAAAGTTTAGGGTTAGTTGTAGAATTCAAGACAACGAAAATCAGAGTAATGGTG
AAGAACCACCAGAGTCATTGTTTATGAAAGAGTTGAGAAGACGTGGCATGAATCCAACTT
CATTGCTTGAGGAGACAAACACAAACATCAAAGAAGACGAGGAGACAAAATCTAGGGAAG
AAGATGGAGGCTTCTACCGCAGAAATGCACTGTCAACAGATTCTGAAAGAAATTTGACTA
ATCAAAGGGAACAGTCTATGGCACTGAATAGTGAAGGCCTTGAGGGTTTGATTCCACGGG
CAAAAATTTTGCTTACTCTTGGTGGAACATTCTTTTTGGCTTTTTGGCCGTTGATCCTTG
TAACTATTGCAGCTTTCTTGGGTTTATACCTGTATTTTGGACCTTCTTTTGTGCATTACG
CGACCAACAGATCGACAGATCCACCACCATATGTTGACCCTTATGTGCTACTCGAAGAAG
AGAGGATATCACAGACAGCTCCACGTCTAAATTGAGTTGCTGCTTATTTCATGAAGTTAT
ACTGTTCAAATGTCTTGAAGGTTTCCATTGCTTATCCTGAATATATTTTCCTTATTATTT
TCTAGTTTGACATTGCCATGATAGCTAGAAGATACTTATGTTGACTGAGAAATCTTATTT
CTATGACTGTAAAATTTGTAAAAATGTGCAAGAGATAAGATTTCCCATTCTGTAACCTAT
ACTGTATATTCTTTATATTGATCCTAATCCCTTCGATGGGAAGTACCCAGAAATTCTTTA
GAAGTCAAGCATCTTATTATGTGAGAGACTCAGTTGGTAT