Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g106510.2.1
CDS Infomation

LOW QUALITY:F-box protein (AHRD V3.3 *** A0A1D1YUP5_9ARAE)
Sequence

ATGAGTCGTCAAAAAAAGAAGGAGAAGCTTGTCAAACCTCAAGAAAAGACTAAAAGCTTG
CTAGAGCCATGGCCAAATCTCCCTCAACAGCTCCTCAACTTTATGGGAAGGCAACATCCT
GATGAAACCAATCGTCTTATGCAGAACATCTGCTTCCCTGGTGTTACTAAATCATGGAGA
GCAGTACCTAAGCAATGTAGTAACAAAAATGCACAATTACCCTGGCTTGAAATTTCCGAC
AAAGATCATTTCTTCCAGTCCAAGACTCAAGAGCATACCCTCACCATCCCATTTCGACTA
GGTGAATATTGGTGGTACAGTAGAAGGTCATCTTGGGATGTTCCTTGGACACATTTTCAT
GGATGTTCACACGGGTTGATTGTCGCTGGAGGGAAGGATCCTGCAACGTACTGTCTCTTG
ATTCCTACTTCAAGATTCACTTATCGGAGTATTCCCACTTGGGATCCCACAATTCCATTC
AAGTTTGCAACTCTGTCTTCAAATCCTTATAACAATAACAAGGCCTGTTTTTTGATGGTG
TTAACAGGATGTTCCACTCCAGCCTTTGTGGTTTCCAATATTGGATACCAAAATAAATGG
ATGAAAGAAGAGAACACCTTGCTTGACCCTAACTGTTCAAAAAGGGAACTAATGCAATTT
ACTAATGCCATCGGCTTTGAAGGTAAGTTCTATGCATTGAGCTTACAAGGTACTTTAGCT
GTAATCGAAGAAATTGAATCCAGGTTTCAAATCACTAAATTAAGCAGAAGCCGGGCTGTT
CCATCAGTTTTTCCAAAACACTTCACAGAGTATTTACAAGAATCCAATGGAGAGATCTTG
TTGATTTTCTTGATATTTGAAAAATCGATTAGGAAGATGGATAAAGTGGAAGTGTTCAAG
CTAGAGATGGATGATCTATCATGGTTAAAATTGGACAAACTTGGAAATAGAACATTGTTT
GTAGGGACTAATTATTGTATGTCCGTTAATGCAAGTCAATTGGGCTGCAGAAGCAACTGT
GTCTATTTCATTGAACGCGCTACTAATACTTGGCTGGTTTATGAAATGGGAAGTGATACT
ATTTCTCCCTGTTTTGATGATTATGGTTCTCAAACAATAAGTCCAGTATGGGAAGAGCCA
ATAGTTGAAAACAAATTTATTGTAAGATGA

Peptide Sequence

PEP ID

Solyc01g106510.2.1
PEP Infomation

LOW QUALITY:F-box protein (AHRD V3.3 *** A0A1D1YUP5_9ARAE)
Sequence

MSRQKKKEKLVKPQEKTKSLLEPWPNLPQQLLNFMGRQHPDETNRLMQNICFPGVTKSWR
AVPKQCSNKNAQLPWLEISDKDHFFQSKTQEHTLTIPFRLGEYWWYSRRSSWDVPWTHFH
GCSHGLIVAGGKDPATYCLLIPTSRFTYRSIPTWDPTIPFKFATLSSNPYNNNKACFLMV
LTGCSTPAFVVSNIGYQNKWMKEENTLLDPNCSKRELMQFTNAIGFEGKFYALSLQGTLA
VIEEIESRFQITKLSRSRAVPSVFPKHFTEYLQESNGEILLIFLIFEKSIRKMDKVEVFK
LEMDDLSWLKLDKLGNRTLFVGTNYCMSVNASQLGCRSNCVYFIERATNTWLVYEMGSDT
ISPCFDDYGSQTISPVWEEPIVENKFIVR*

Transcript Sequence

Transcript ID

Solyc01g106510.2.1
Transcript Infomation

LOW QUALITY:F-box protein (AHRD V3.3 *** A0A1D1YUP5_9ARAE)
Sequence

GAGGCAAGTTAATATAAAAAAGGCGCATATTAGAAGTTTCAAAATAGCCATCTCTTCATC
TATTCTCTAAAAATGAGTCGTCAAAAAAAGAAGGAGAAGCTTGTCAAACCTCAAGAAAAG
ACTAAAAGCTTGCTAGAGCCATGGCCAAATCTCCCTCAACAGCTCCTCAACTTTATGGGA
AGGCAACATCCTGATGAAACCAATCGTCTTATGCAGAACATCTGCTTCCCTGGTGTTACT
AAATCATGGAGAGCAGTACCTAAGCAATGTAGTAACAAAAATGCACAATTACCCTGGCTT
GAAATTTCCGACAAAGATCATTTCTTCCAGTCCAAGACTCAAGAGCATACCCTCACCATC
CCATTTCGACTAGGTGAATATTGGTGGTACAGTAGAAGGTCATCTTGGGATGTTCCTTGG
ACACATTTTCATGGATGTTCACACGGGTTGATTGTCGCTGGAGGGAAGGATCCTGCAACG
TACTGTCTCTTGATTCCTACTTCAAGATTCACTTATCGGAGTATTCCCACTTGGGATCCC
ACAATTCCATTCAAGTTTGCAACTCTGTCTTCAAATCCTTATAACAATAACAAGGCCTGT
TTTTTGATGGTGTTAACAGGATGTTCCACTCCAGCCTTTGTGGTTTCCAATATTGGATAC
CAAAATAAATGGATGAAAGAAGAGAACACCTTGCTTGACCCTAACTGTTCAAAAAGGGAA
CTAATGCAATTTACTAATGCCATCGGCTTTGAAGGTAAGTTCTATGCATTGAGCTTACAA
GGTACTTTAGCTGTAATCGAAGAAATTGAATCCAGGTTTCAAATCACTAAATTAAGCAGA
AGCCGGGCTGTTCCATCAGTTTTTCCAAAACACTTCACAGAGTATTTACAAGAATCCAAT
GGAGAGATCTTGTTGATTTTCTTGATATTTGAAAAATCGATTAGGAAGATGGATAAAGTG
GAAGTGTTCAAGCTAGAGATGGATGATCTATCATGGTTAAAATTGGACAAACTTGGAAAT
AGAACATTGTTTGTAGGGACTAATTATTGTATGTCCGTTAATGCAAGTCAATTGGGCTGC
AGAAGCAACTGTGTCTATTTCATTGAACGCGCTACTAATACTTGGCTGGTTTATGAAATG
GGAAGTGATACTATTTCTCCCTGTTTTGATGATTATGGTTCTCAAACAATAAGTCCAGTA
TGGGAAGAGCCAATAGTTGAAAACAAATTTATTGTAAGATGAAAAAGGGAAGTGTTATAT
CCAGTTTTAATTAACTTGTGTGTGTTGTATTACCAATAATATAATAAATAGAACAGCATT
CAAGGAACAACTTGAAGCTCTTCATCTGCCATTGTAATTTGTCATAATTGGAATGTCTGG
TTAGTTAAGCTTTCTTTAGCATCTGGAGTAGATGAACGTACTCGGGAAGGAAATGATCTT
ACATGAAAATTTATGCAAAATTAA