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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g106320.2.1
CDS Infomation

Octicosapeptide/Phox/Bem1p family protein (AHRD V3.3 *** AT5G64430.1)
Sequence

ATGGAGAACTACTCTTACACCTCTTACCCTGAATCCGGCGATTCATCTCCCCGTTCCCGT
GAAATTGATTTTGAAAACACTGCCGCATGGGAAGATCCGAATCAAATCCCTAATTATAAG
GTCAAATTCATGTGTAGTTATGGTGGTAAGATTCACCCGAGACCTCATGATAACCAGCTT
GCTTACATCGGCGGTGAAACTAAAATACTATCTGTTGAGCGGAATACTAAGTTTCCTCTT
CTCATTTCTAAGCTTGCTGCTATTTGTGATACGGATACTGTTTCCTTTAAGTATCAGCTG
CCAGGTGAGGACCTTGATGCTTTAATTTCTGTTACTAATGATGATGATTTAGAACATATG
ATGCATGAGTATGATCGTCTTTATAGAGCTTCACCTAAACCAGCTAGGCTTAGGTTGTTT
TTGTTTCCGGCCAATACGCCGGCGACTGTTGGGAGTGGGGTGTCGCAGAGCCGGAGTTTT
GGTTCGGAGGATTCCAAATCGGAGAAGGATAGGTTTGTCGATGCGTTGAATTCTGGTCCG
ATTCAGGCGTCTCCGGCTGCGGGGGCTGTTGCACAGCAGGTTGGAAACGCGGATTTTCTG
TTTGGTTCAGAGAAAGGGATGGTACCGCCACATGTGAAATTGAGAGATCCGAACTCTGAG
CAAGTTGTTAAGGAACCAGAGATGCCGGTTCATGGAGTGGATGATAGGATGATGGGGACT
GATCCGATCCAGAAGCACATTCAGGATCTGCAGAGATTGCATCTAGAAGAGCAACAAAAT
TTGTATCGTCGGAAAAGCGACGATAATCTGACAGCGGCTTTCCCCGGAGGTGATTATTAT
GTTCAGAGAGGACCGGAGAAAATAGCTTCTCCTACCGTGCCGGGTACAGTACCTGCACAG
GTTGGCTATTGGCAGGAAAAACAAGTTCCCGGAGGAGTACTGCCGGCGAGCAGTCTCGGT
ATGGAACAACCAGTTTACATGATTCATCAAGCACCGGCCGGAGCATATCAACCACACCAG
CACCAACACCAACACCCACAATTTGTCAGGCCAATGGCCGGACCACCGGGTCAAGGGTAC
TACGCCGTACAGAGGATGCCACAGGAGCCTTACAGGGATCAACCAGTTTACAATGTCATG
CCTAGTTTACCACAAGCAGTACCGACAGTTGCAGCGGCACCACCAACTTTACAATCTCAG
GTACCTCCAAAGGTGGCTGGTTATTCGGAAGGATATGGCATGGTAAGACCCGCAACTACC
ATGGGAGTTGGTGTAGCAGATGCAGGTGGGTACACACAGATGGCGTACGATGGTGGAGTA
GGAAGGCAGATGTACTATCCTCCCCAAGGTGGTGTCATAGCGCCACCACAACAACAACCG
CAGTACCACGCAATGCCGCCACAAGCTGTTGTTGGCTCCGATATGAGACCTCAAGAAGCT
GCTAAAGTCGTACCTGTGAAACCTACACAAACATCAGTGTGA

Peptide Sequence

PEP ID

Solyc01g106320.2.1
PEP Infomation

Octicosapeptide/Phox/Bem1p family protein (AHRD V3.3 *** AT5G64430.1)
Sequence

MENYSYTSYPESGDSSPRSREIDFENTAAWEDPNQIPNYKVKFMCSYGGKIHPRPHDNQL
AYIGGETKILSVERNTKFPLLISKLAAICDTDTVSFKYQLPGEDLDALISVTNDDDLEHM
MHEYDRLYRASPKPARLRLFLFPANTPATVGSGVSQSRSFGSEDSKSEKDRFVDALNSGP
IQASPAAGAVAQQVGNADFLFGSEKGMVPPHVKLRDPNSEQVVKEPEMPVHGVDDRMMGT
DPIQKHIQDLQRLHLEEQQNLYRRKSDDNLTAAFPGGDYYVQRGPEKIASPTVPGTVPAQ
VGYWQEKQVPGGVLPASSLGMEQPVYMIHQAPAGAYQPHQHQHQHPQFVRPMAGPPGQGY
YAVQRMPQEPYRDQPVYNVMPSLPQAVPTVAAAPPTLQSQVPPKVAGYSEGYGMVRPATT
MGVGVADAGGYTQMAYDGGVGRQMYYPPQGGVIAPPQQQPQYHAMPPQAVVGSDMRPQEA
AKVVPVKPTQTSV*

Transcript Sequence

Transcript ID

Solyc01g106320.2.1
Transcript Infomation

Octicosapeptide/Phox/Bem1p family protein (AHRD V3.3 *** AT5G64430.1)
Sequence

ATCAATCGGAACAAGTTGCAGACACTTTCCGTAAAGTCACGGGTGAGAATAGTAATTCCA
CTCTCTCAAACAGCCGCTTAAAATCCCCCCATCTTCTCCATTTTTTTCAGTCTTCTCTAA
TGGCCTAAACTCTACTTATCAAAAATACAGTAGAAAATCCTCCTAAACCCCCCAAAACAT
GGAGAACTACTCTTACACCTCTTACCCTGAATCCGGCGATTCATCTCCCCGTTCCCGTGA
AATTGATTTTGAAAACACTGCCGCATGGGAAGATCCGAATCAAATCCCTAATTATAAGGT
CAAATTCATGTGTAGTTATGGTGGTAAGATTCACCCGAGACCTCATGATAACCAGCTTGC
TTACATCGGCGGTGAAACTAAAATACTATCTGTTGAGCGGAATACTAAGTTTCCTCTTCT
CATTTCTAAGCTTGCTGCTATTTGTGATACGGATACTGTTTCCTTTAAGTATCAGCTGCC
AGGTGAGGACCTTGATGCTTTAATTTCTGTTACTAATGATGATGATTTAGAACATATGAT
GCATGAGTATGATCGTCTTTATAGAGCTTCACCTAAACCAGCTAGGCTTAGGTTGTTTTT
GTTTCCGGCCAATACGCCGGCGACTGTTGGGAGTGGGGTGTCGCAGAGCCGGAGTTTTGG
TTCGGAGGATTCCAAATCGGAGAAGGATAGGTTTGTCGATGCGTTGAATTCTGGTCCGAT
TCAGGCGTCTCCGGCTGCGGGGGCTGTTGCACAGCAGGTTGGAAACGCGGATTTTCTGTT
TGGTTCAGAGAAAGGGATGGTACCGCCACATGTGAAATTGAGAGATCCGAACTCTGAGCA
AGTTGTTAAGGAACCAGAGATGCCGGTTCATGGAGTGGATGATAGGATGATGGGGACTGA
TCCGATCCAGAAGCACATTCAGGATCTGCAGAGATTGCATCTAGAAGAGCAACAAAATTT
GTATCGTCGGAAAAGCGACGATAATCTGACAGCGGCTTTCCCCGGAGGTGATTATTATGT
TCAGAGAGGACCGGAGAAAATAGCTTCTCCTACCGTGCCGGGTACAGTACCTGCACAGGT
TGGCTATTGGCAGGAAAAACAAGTTCCCGGAGGAGTACTGCCGGCGAGCAGTCTCGGTAT
GGAACAACCAGTTTACATGATTCATCAAGCACCGGCCGGAGCATATCAACCACACCAGCA
CCAACACCAACACCCACAATTTGTCAGGCCAATGGCCGGACCACCGGGTCAAGGGTACTA
CGCCGTACAGAGGATGCCACAGGAGCCTTACAGGGATCAACCAGTTTACAATGTCATGCC
TAGTTTACCACAAGCAGTACCGACAGTTGCAGCGGCACCACCAACTTTACAATCTCAGGT
ACCTCCAAAGGTGGCTGGTTATTCGGAAGGATATGGCATGGTAAGACCCGCAACTACCAT
GGGAGTTGGTGTAGCAGATGCAGGTGGGTACACACAGATGGCGTACGATGGTGGAGTAGG
AAGGCAGATGTACTATCCTCCCCAAGGTGGTGTCATAGCGCCACCACAACAACAACCGCA
GTACCACGCAATGCCGCCACAAGCTGTTGTTGGCTCCGATATGAGACCTCAAGAAGCTGC
TAAAGTCGTACCTGTGAAACCTACACAAACATCAGTGTGATTGATCTGTGCTTTCCTATA
AAAATGATCAAAATAATAAAATAAAAGTAGTAGGGGAGTTTATAGTATAATCCTGTTTAT
CTTGAGAAGATTTATGTGCCATATCGTGTACATTTTGAGTGGAGATTGATTTCTATGCTT
CTTCAAGATTATATCTTCCTTTATATCATGCAATGCATTTTGTGATTTTCCATTTTTTAA
CTTGAAG