Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g106150.1.1
CDS Infomation	LOW QUALITY:Interferon-related developmental regulator family protein (AHRD V3.3 *** B9GNQ1_POPTR)
Sequence	ATGGGTGATGCTTCAAATTCAACCTATATTCCAGAGAAGGATCTCCATACTTATTTAGAG GAATTATTCAAGAAAAAGAGTTCTGCCAGAAAAAACGCACTAAAGACATTGATTAAGCAA TTTGAGACCAATGTCCGTTACGAATTTGTTCAAAATAATTTTGTCACTTTAATACATCGA TGCCAAAATTGCTTGAAACGGGGTTCAGCATCGGAGATTGATTTAGCATTACAACTAATA GGATTAGTTGTTCTAACGCTTGGTGCCGGTGATAATGCACGTGAGGTGTATGAAGAATTG TTTGTGTTAGTCCGTGAACTTGTCACCAAATCCAAATTATGTCACGCGATCAAGGTGTTT GAATGTTTGTCTATTGTCACTTGTGTTGGTGCCAGAGACTTTATAGACACCGAAAGATCA ATGGAAATTATATGGCAATTCTTGAATCAAGAAACCAAACATACATCCTCTGTGACGGCT GCAGCAATATCAGGTTGGGTTCTCCTCCTGTCAGGCATTGATCGATGGAGCATTAGTCCG AAAAAGTGGAAAGAATCGATCTCTTATCTTCTGAAACAATTAGAGGAAGATGATGAACAT GTTAATGTTGCTAGCATTGAAGCGCTAGCTTTGATTTTTGAAATTGGCAGTCTTGAGAAA TTTTCCAATCAAGACGGAGAATACAAGGACATAAAAGATGGGATAATGGATCAGATAAAG AGAATATGCAATGGCACCAAACAAGACACTTCAAAAATTTTCGAGGATGATTATGATAAG ACCATCACCCTCACATTAGGCAGAACAAGTCTCACTTTTAGCACCTGGTCAAAGTTGAAA CAAATAAGTTACATAAGGAAATTTTTAGGCAACGGTTTCAAAAATCACATGAAGGAAAAC AAACACCTCCACAACGTTTTTAATTTTGCACCAGCAAGAAAATGCAGTAGTGATGATGAT TTAGAACTGTACAAACCTGAGTTCGAAGAGGCGGTTGTGCGAGTTTTTGTGCCTGAAGTT AGAAGAGAAAATTGTGCATGGAGGATTAACAAGTCCCGTAATTCTGTACTGAGCAAGGGA AGGACTAAGTTGCGGAACAAGTACAGAACTCTTGCAGAGGATACCAAGACTGGGCACATT GCTGATGAACAGCTTGACTGA

Peptide Sequence

PEP ID	Solyc01g106150.1.1
PEP Infomation	LOW QUALITY:Interferon-related developmental regulator family protein (AHRD V3.3 *** B9GNQ1_POPTR)
Sequence	MGDASNSTYIPEKDLHTYLEELFKKKSSARKNALKTLIKQFETNVRYEFVQNNFVTLIHR CQNCLKRGSASEIDLALQLIGLVVLTLGAGDNAREVYEELFVLVRELVTKSKLCHAIKVF ECLSIVTCVGARDFIDTERSMEIIWQFLNQETKHTSSVTAAAISGWVLLLSGIDRWSISP KKWKESISYLLKQLEEDDEHVNVASIEALALIFEIGSLEKFSNQDGEYKDIKDGIMDQIK RICNGTKQDTSKIFEDDYDKTITLTLGRTSLTFSTWSKLKQISYIRKFLGNGFKNHMKEN KHLHNVFNFAPARKCSSDDDLELYKPEFEEAVVRVFVPEVRRENCAWRINKSRNSVLSKG RTKLRNKYRTLAEDTKTGHIADEQLD*

Transcript Sequence

Transcript ID	Solyc01g106150.1.1
Transcript Infomation	LOW QUALITY:Interferon-related developmental regulator family protein (AHRD V3.3 *** B9GNQ1_POPTR)
Sequence	ATGGGTGATGCTTCAAATTCAACCTATATTCCAGAGAAGGATCTCCATACTTATTTAGAG GAATTATTCAAGAAAAAGAGTTCTGCCAGAAAAAACGCACTAAAGACATTGATTAAGCAA TTTGAGACCAATGTCCGTTACGAATTTGTTCAAAATAATTTTGTCACTTTAATACATCGA TGCCAAAATTGCTTGAAACGGGGTTCAGCATCGGAGATTGATTTAGCATTACAACTAATA GGATTAGTTGTTCTAACGCTTGGTGCCGGTGATAATGCACGTGAGGTGTATGAAGAATTG TTTGTGTTAGTCCGTGAACTTGTCACCAAATCCAAATTATGTCACGCGATCAAGGTGTTT GAATGTTTGTCTATTGTCACTTGTGTTGGTGCCAGAGACTTTATAGACACCGAAAGATCA ATGGAAATTATATGGCAATTCTTGAATCAAGAAACCAAACATACATCCTCTGTGACGGCT GCAGCAATATCAGGTTGGGTTCTCCTCCTGTCAGGCATTGATCGATGGAGCATTAGTCCG AAAAAGTGGAAAGAATCGATCTCTTATCTTCTGAAACAATTAGAGGAAGATGATGAACAT GTTAATGTTGCTAGCATTGAAGCGCTAGCTTTGATTTTTGAAATTGGCAGTCTTGAGAAA TTTTCCAATCAAGACGGAGAATACAAGGACATAAAAGATGGGATAATGGATCAGATAAAG AGAATATGCAATGGCACCAAACAAGACACTTCAAAAATTTTCGAGGATGATTATGATAAG ACCATCACCCTCACATTAGGCAGAACAAGTCTCACTTTTAGCACCTGGTCAAAGTTGAAA CAAATAAGTTACATAAGGAAATTTTTAGGCAACGGTTTCAAAAATCACATGAAGGAAAAC AAACACCTCCACAACGTTTTTAATTTTGCACCAGCAAGAAAATGCAGTAGTGATGATGAT TTAGAACTGTACAAACCTGAGTTCGAAGAGGCGGTTGTGCGAGTTTTTGTGCCTGAAGTT AGAAGAGAAAATTGTGCATGGAGGATTAACAAGTCCCGTAATTCTGTACTGAGCAAGGGA AGGACTAAGTTGCGGAACAAGTACAGAACTCTTGCAGAGGATACCAAGACTGGGCACATT GCTGATGAACAGCTTGACTGA